EY756928

Overview
NameEY756928
Unique NameEY756928
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756928 vs. ExPASy Swiss-Prot
Match: CTLHB_DICDI (CTL-like protein DDB_G0274487 OS=Dictyostelium discoideum GN=DDB_G0274487 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.819e-22
Identity = 61/218 (27.98%), Postives = 110/218 (50.46%), Query Frame = 1
Query:   88 FWTGAVLCNTVHVIVSGMVFLVLIHDGRDSVSMPHNPLVKSLRYAVTTSLGSICYGSLFTAAIRTLRWEIRGIRSKIGNNECLLCCVDFLFH----LVETLVRFFNKYAYVQIAVYGKGFNRSARDAWELFQSTGVEALVAYDCSGAVLLMGTIVGGLITGTCAXAWTYTKWHDRVVMVGSTXXXXXXXXXXXXXXXIESAVTSIYICYAEDPLLITN 729
            +W   V+ NT+H  VSG++       G + V MPHNP + S R A+TTS GSIC+GSL  + I TLR+     +  I N   ++  + ++F+    ++ ++V+FFN YA+  +A+YGK F  SA+  + +F++     ++  +  G  + +G +V  L+        +     D  V  G+                + S+  S+++CY  +P ++ +
Sbjct:  327 YWVFHVIKNTLHTTVSGLLATWYFCSGPNGVGMPHNPTLGSARRALTTSFGSICFGSLIISLIETLRYL---SQMMINNRNVVVKIIGYIFNCILSMLSSIVQFFNTYAFTHVAIYGKSFCDSAKSTFTMFENRLGSTIINDNFVGTTIAIGGLVASLLLSILGALISIP--FDMSVYGGALALFIGYLVIITNLEVVYSSTISLFVCYVMEPEVLAH 539          
BLAST of EY756928 vs. ExPASy Swiss-Prot
Match: PNS1_KLULA (Protein PNS1 OS=Kluyveromyces lactis GN=PNS1 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.762e-17
Identity = 56/178 (31.46%), Postives = 92/178 (51.69%), Query Frame = 1
Query:   88 FWTGAVLCNTVHVIVSGMVFLVLIHDGRDSVSMPHNPLVKSLRYAVTTSLGSICYGSLFTAAIRTLRWEIR--------GIRSKIGNNECLLCCVDFLFHLVETLVRFFNKYAYVQIAVYGKGFNRSARDAWELFQSTGVEALVAYDCSGAVLLMGTIVGGLITGTCAXAWTYTKWHD 597
            ++   V+ N +H  VSG +F    +  +    MP  P   +L+ ++T S GSIC+GSL    I TL+  +R        G  +  G  +CL    +++F  +E L R+FN YAYV IA+YGK + R+A++ W + +  G++AL+  +     L   T+    I  T   A+ Y ++ D
Sbjct:  302 YYIAEVIRNVIHCTVSG-IFGAWYYFSKSDQGMPKWPGFGALKRSLTYSFGSICFGSLIVTIIETLKAVLRLAVDGVMGGGGADNGWMQCLALIANWIFSFLEWLARYFNHYAYVFIALYGKPYLRAAKETWYMLREKGIDALINDNLVNVALSFFTLFTCYI--TTLFAYLYLRYTD 476          
BLAST of EY756928 vs. ExPASy Swiss-Prot
Match: PNS1_ASHGO (Protein PNS1 OS=Ashbya gossypii GN=PNS1 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.006e-17
Identity = 52/163 (31.90%), Postives = 87/163 (53.37%), Query Frame = 1
Query:   88 FWTGAVLCNTVHVIVSGMVFLVLIHDGRDSVSMPHNPLVKSLRYAVTTSLGSICYGSLFTAAIRTLRWEIRGIRSKI-------GNNECLLCCVDFLFHLVETLVRFFNKYAYVQIAVYGKGFNRSARDAWELFQSTGVEALVAYDCSGAVLLMGTIVGGLIT 555
            F+   V+ N +H  ++G ++    +  +    MP  P   SL+ A+TTS GSIC+GSL  + I+ LR  I+ +R+ I       G  +CL   +D +  + E +  +FN YAY  IA+YGK + R+A++ W + +  G++AL+  +     L   T+  G  T
Sbjct:  303 FYISEVIRNVIHCTIAG-IYGCWYYFSKSDQGMPRWPAFGSLKRALTTSFGSICFGSLIVSLIQLLRQIIQLLRNGIISGISDSGWMQCLWLILDAVVGVFEWMAEYFNHYAYCFIALYGKPYLRAAKETWHMLREKGIDALINDNLINLALGFYTLFVGYTT 464          
BLAST of EY756928 vs. ExPASy Swiss-Prot
Match: PNS1_YARLI (Protein PNS1 OS=Yarrowia lipolytica GN=PNS1 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.948e-16
Identity = 53/153 (34.64%), Postives = 82/153 (53.59%), Query Frame = 1
Query:   88 FWTGAVLCNTVHVIVSGMVFLVLIHDGRDSVSMPHNPLVKSLRYAVTTSLGSICYGSLFTAAIRTLRWEIRGIRSKIGNN-----ECLLCCVDFLFHLVETLVRFFNKYAYVQIAVYGKGFNRSARDAWELFQSTGVEALVAYDCSGAVLLMG 531
            ++   V+ N +HV +SG V+    +  +    MP +  + S R AVT SLGSI  GSL  + I  +R  +  ++     +       LLC V   F +++ LV +FN YAY  IA+YGK +  SA+  W+L Q+ G++A+V     G+VL  G
Sbjct:  326 YYLTEVIKNVIHVTISG-VYGSWYYCSKSDQGMPKHAAMSSFRRAVTYSLGSISLGSLIVSIINFIRQILSVLQQDARQSGDTLATVLLCFVQCCFGVLDWLVTYFNHYAYSYIALYGKAYVPSAKATWKLMQTRGIDAMVNDSLIGSVLSFG 477          
BLAST of EY756928 vs. ExPASy Swiss-Prot
Match: PNS1_CANAL (Protein PNS1 OS=Candida albicans GN=PNS1 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.948e-16
Identity = 46/141 (32.62%), Postives = 80/141 (56.74%), Query Frame = 1
Query:   88 FWTGAVLCNTVHVIVSGMVFLVLIHDGRDSVSMPHNPLVKSLRYAVTTSLGSICYGSLFTAAIRTLRWEIRGIRSKI-----GNNECLLCCVDFLFHLVETLVRFFNKYAYVQIAVYGKGFNRSARDAWELFQSTGVEALV 495
            ++   V+ N +HV+++G ++    +        P +P + SL+ A+T   GSI +GSL  + I+ LR  I  +RS       G   C +  +DF    ++ LVR+ NKYAY  +A+YGK + +SA+D ++L +  G++AL+
Sbjct:  271 YYISEVIRNVIHVVIAG-IYGTWYYLANSDQGAPKHPALSSLKRALTYCFGSITFGSLIVSLIQLLRQFISILRSNFAADGNGWGVCGMIILDFFVGFIDWLVRYLNKYAYCYVALYGKSYIKSAKDTFDLIRFKGMDALI 410          
BLAST of EY756928 vs. ExPASy Swiss-Prot
Match: PNS1_YEAST (Protein PNS1 OS=Saccharomyces cerevisiae GN=PNS1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.154e-15
Identity = 46/143 (32.17%), Postives = 79/143 (55.24%), Query Frame = 1
Query:   88 FWTGAVLCNTVHVIVSGMVFLVLIHDGRDSVSMPHNPLVKSLRYAVTTSLGSICYGSLFTAAIRTLRWEIRGIRSKIGNN-------ECLLCCVDFLFHLVETLVRFFNKYAYVQIAVYGKGFNRSARDAWELFQSTGVEALV 495
            ++   V+ N +H ++SG VF    +  +    MP  P   +L+ A+T S GSIC+GSL  A I  LR  ++ IR  + ++       + L    D++   ++ L  +FN YAY  IA+YGK + R+A++ W + +  G++AL+
Sbjct:  289 YYISEVIRNVIHCVISG-VFGSWYYMSKSDQGMPRWPAFGALKRAMTYSFGSICFGSLLVALIDLLRQILQMIRHDVTSSGGGQIAIQILFMVFDWIIGFLKWLAEYFNHYAYSFIALYGKPYLRAAKETWYMLREKGMDALI 430          
BLAST of EY756928 vs. ExPASy Swiss-Prot
Match: PNS1_GIBZE (Protein PNS1 OS=Gibberella zeae GN=PNS1 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.675e-15
Identity = 54/176 (30.68%), Postives = 86/176 (48.86%), Query Frame = 1
Query:   88 FWTGAVLCNTVHVIVSGMVFLVLIHDGRDSVSMPHNPLVKSLRYAVTTSLGSICYGSLFTAAIRTLRWEIRGIRSKIGNNE-----CLLCCVDFLFHLVETLVRFFNKYAYVQIAVYGKGFNRSARDAWELFQSTGVEALVAYDCSGAVLLMGTIVGGLITGTCA-XAWTYTKWHD 597
            +W    L NT+H  ++G+      +      + P +    S + A+T S GSI  GSL  A I+ LR      R++ G +       + CC+  L  L+E  V F N+YA+  IA+YGK +  +A+D W++ +  G++AL+     G VL  G +    I   CA  A+ Y  + D
Sbjct:  295 YWFSEWLKNTIHTTIAGVYGSWYFNPH----NFPKDATRASAKRALTYSFGSIALGSLLVAIIQFLRQICNAARNQEGADGSFVGYAIFCCISCLLGLLEWAVEFINRYAFCHIALYGKAYFAAAKDTWKMIKDRGIDALINDCLIGPVLSFGAL---FIAYACALLAYLYLYFTD 463          
BLAST of EY756928 vs. ExPASy Swiss-Prot
Match: PNS1_DEBHA (Protein PNS1 OS=Debaryomyces hansenii GN=PNS1 PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.799e-15
Identity = 49/177 (27.68%), Postives = 97/177 (54.80%), Query Frame = 1
Query:   88 FWTGAVLCNTVHVIVSGMVFLVLIHDGRDSVSMPHNPLVKSLRYAVTTSLGSICYGSLFTAAIRTLRWEIRGIRSKI---GNN--ECLLCCVDFLFHLVETLVRFFNKYAYVQIAVYGKGFNRSARDAWELFQSTGVEALVAYDC--SGAVLLMGTIVGGLITGTCAXAWTYTKWHD 597
            ++   V+ N +H+ ++G ++    +        P +P + + + A+T   GS+C+GSL  + I+ +R  ++ ++      G+N   C    +DF+   ++ +VR+FN YAY  +A+YGK + +SARD ++L +  G++AL+  DC  + ++ L    VG ++      A+ Y K+ D
Sbjct:  266 YYISEVIKNVIHITIAG-IYGTWYYLSNSDQGEPKHPALGAFKRAMTYCFGSVCFGSLIVSIIQLIRSFVQILKQNAFGSGDNCAGCGFLILDFVLGFIDWIVRYFNHYAYCYVALYGKSYLKSARDTFDLIRFKGMDALI-NDCFINTSLNLYSMFVGYVV---ALLAYFYLKFTD 437          
BLAST of EY756928 vs. ExPASy Swiss-Prot
Match: PNS1_USTMA (Protein PNS1 OS=Ustilago maydis GN=PNS1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.396e-14
Identity = 61/239 (25.52%), Postives = 107/239 (44.77%), Query Frame = 1
Query:   88 FWTGAVLCNTVHVIVSGMVFLVLIHDGRDSVSMPHNPLVKSLRYAVTTSLGSICYGSLFTAAIRTLRWEIRGIRSKIGNN-----ECLLCCVDFLFHLVETLVRFFNKYAYVQIAVYGKGFNRSARDAWELFQSTGVEALVAYDCSGAVLLMGTIVGGLITGTCAXAWTY----------TKWHDRVVMVGSTXXXXXXXXXXXXXXXIESAVTSIYICYAEDPLLI--TNGMLXPLIR 753
            +W   V+ N     V+G +F V  ++         N    + R ++T SLGSIC+GSL  A +  LR     ++S+  ++     + L C        ++ LV +FN+YAY+ IA+YG G+  +A++ W L +  G++A++       V   G  + GL+T   A  +              ++  V++V                  I S V++ ++  AEDP ++   N  L  +IR
Sbjct:  359 YWISEVIKNIAFTTVAG-IFGVAYYNANKVA----NAAWGAFRRSMTYSLGSICFGSLIVAILDLLRALFNILQSQAASDGDMTGQILACVAGCCVSCIQGLVDYFNRYAYINIALYGNGYITAAKETWALLKDRGIDAIINDSLVNIVFNCGAFIIGLLTALFAFIYEQLTNPRYLQNDAGYYSIVLLV--AFGLGFNIALSVGAGSIASGVSTYFVALAEDPYILQGKNPELFEMIR 590          
BLAST of EY756928 vs. ExPASy Swiss-Prot
Match: PNS1_CRYNE (Protein PNS1 OS=Cryptococcus neoformans GN=PNS1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.382e-14
Identity = 48/161 (29.81%), Postives = 80/161 (49.69%), Query Frame = 1
Query:   91 WTGAVLCNTVHVIVSGMVFLVLIHDGRDSVS--MPHNPLVKSLRYAVTTSLGSICYGSLFTAAIRTLRWEIRGIRS-KIGNNEC----LLCCVDFLFHLVETLVRFFNKYAYVQIAVYGKGFNRSARDAWELFQSTGVEALVAYDCSGAVLLMGTIVGGLI 552
            W   V+ N +   ++G VF    + G  +    +P    + +   A T SLGSI +GSL    +  LR  ++  R  + G  +     L+C        ++ +V +FNKYAY++IA+YGK +  +A+D W L +  G++ALV     G  L+ G  + G +
Sbjct:  304 WLSQVIGNVILCTLAGGVFGGWYYYGPRTPGGGVPKRASLLAFVRASTLSLGSIAFGSLLVTILELLRLILQLFRQYEAGQGDMIGSILICIAQCCIGCIQWMVEYFNKYAYIEIALYGKSYIPAAKDTWRLLKDRGIDALVNDSLVGTALMWGAYINGFL 464          
The following BLAST results are available for this feature:
BLAST of EY756928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
CTLHB_DICDI1.819e-2227.98CTL-like protein DDB_G0274487 OS=Dictyostelium dis... [more]
PNS1_KLULA1.762e-1731.46Protein PNS1 OS=Kluyveromyces lactis GN=PNS1 PE=3 ... [more]
PNS1_ASHGO3.006e-1731.90Protein PNS1 OS=Ashbya gossypii GN=PNS1 PE=3 SV=1[more]
PNS1_YARLI1.948e-1634.64Protein PNS1 OS=Yarrowia lipolytica GN=PNS1 PE=3 S... [more]
PNS1_CANAL1.948e-1632.62Protein PNS1 OS=Candida albicans GN=PNS1 PE=3 SV=1[more]
PNS1_YEAST2.154e-1532.17Protein PNS1 OS=Saccharomyces cerevisiae GN=PNS1 P... [more]
PNS1_GIBZE3.675e-1530.68Protein PNS1 OS=Gibberella zeae GN=PNS1 PE=3 SV=1[more]
PNS1_DEBHA4.799e-1527.68Protein PNS1 OS=Debaryomyces hansenii GN=PNS1 PE=3... [more]
PNS1_USTMA1.396e-1425.52Protein PNS1 OS=Ustilago maydis GN=PNS1 PE=3 SV=1[more]
PNS1_CRYNE2.382e-1429.81Protein PNS1 OS=Cryptococcus neoformans GN=PNS1 PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-015-C07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756928 ID=EY756928; Name=EY756928; organism=Citrus sinensis; type=EST; length=876bp
CCACGCGTCCGGACAGCTGGTGCTGTTGCTTCAGACATGGATGATGGTGG
ACGCTGGTGGCTTCTTTTGGTTCTCTCTGTAAGCTTATTTTGGACTGGCG
CAGTCCTCTGTAACACGGTGCATGTGATAGTGTCTGGGATGGTGTTTCTT
GTTCTTATTCATGATGGCCGAGATTCAGTATCAATGCCTCACAACCCATT
GGTGAAGTCTCTGCGGTATGCTGTAACAACATCTTTGGGCAGCATTTGCT
ATGGATCACTCTTCACAGCTGCTATTCGGACTTTGAGGTGGGAGATCAGG
GGGATCCGTTCAAAGATTGGCAACAACGAGTGTTTGCTTTGCTGTGTTGA
TTTTCTTTTTCATCTTGTGGAAACTCTTGTTAGGTTTTTTAACAAGTATG
CGTATGTCCAGATAGCTGTCTATGGCAAAGGTTTTAACCGGTCAGCAAGG
GATGCCTGGGAGTTATTTCAATCAACTGGTGTTGAAGCACTTGTTGCCTA
TGATTGTTCAGGTGCTGTTCTACTGATGGGCACTATTGTGGGTGGGCTTA
TCACTGGAACTTGTGCANGTGCTTGGACATATACTAAATGGCACGATAGA
GTGGTTATGGTGGGTTCCACAGCAATGCTGATGGGAATGGTCTTAGTGGG
ATTGGCAATGGTTGTAATAGAAAGTGCTGTTACTTCCATATATATCTGTT
ATGCAGAAGATCCTTTGTTGATCACAAATGGGATGCTGNATCCTTTAATC
AGATGTCTGAAACACTACACCAACGTCTTTCATATAGGAGTGCACGAGCT
AGGGAAGGTTTGACCCACCAACGGTTTGATTCCCATACACAAAATTCACT
TTCTGGTTAAGTGGTGAAAATGTTTG
back to top