EY756906

Overview
NameEY756906
Unique NameEY756906
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length413
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756906 vs. ExPASy Swiss-Prot
Match: CHS2_CITSI (Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.571e-19
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 1
Query:   13 LDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 150
            LDEMRKKS EEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA
Sbjct:  346 LDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 391          
BLAST of EY756906 vs. ExPASy Swiss-Prot
Match: CHSY_PETCR (Chalcone synthase OS=Petroselinum crispum GN=CHS PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.143e-17
Identity = 41/43 (95.35%), Postives = 41/43 (95.35%), Query Frame = 1
Query:   13 LDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 141
            LDEMRKKS EE KATTGEGLDWGVLFGFGPGLTVETVVLHSVP
Sbjct:  351 LDEMRKKSIEEGKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 393          
BLAST of EY756906 vs. ExPASy Swiss-Prot
Match: CHS4_SORBI (Chalcone synthase 4 OS=Sorghum bicolor GN=CHS4 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.105e-17
Identity = 40/44 (90.91%), Postives = 43/44 (97.73%), Query Frame = 1
Query:   13 LDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 144
            LDEMRK+SAE+ +ATTGEGLDWGVLFGFGPGLTVETVVLHSVPI
Sbjct:  350 LDEMRKRSAEDGQATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 393          
BLAST of EY756906 vs. ExPASy Swiss-Prot
Match: CHS2_MAIZE (Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.105e-17
Identity = 40/44 (90.91%), Postives = 43/44 (97.73%), Query Frame = 1
Query:   13 LDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 144
            LDEMRK+SAE+ +ATTGEGLDWGVLFGFGPGLTVETVVLHSVPI
Sbjct:  350 LDEMRKRSAEDGQATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 393          
BLAST of EY756906 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSJ (Chalcone synthase OS=Oryza sativa subsp. japonica GN=CHS PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.361e-17
Identity = 40/46 (86.96%), Postives = 43/46 (93.48%), Query Frame = 1
Query:   13 LDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 150
            LDEMRK+SAE+  ATTGEG+DWGVLFGFGPGLTVETVVLHSVPI A
Sbjct:  349 LDEMRKRSAEDGHATTGEGMDWGVLFGFGPGLTVETVVLHSVPITA 394          
BLAST of EY756906 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSI (Chalcone synthase OS=Oryza sativa subsp. indica GN=CHS PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.361e-17
Identity = 40/46 (86.96%), Postives = 43/46 (93.48%), Query Frame = 1
Query:   13 LDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 150
            LDEMRK+SAE+  ATTGEG+DWGVLFGFGPGLTVETVVLHSVPI A
Sbjct:  349 LDEMRKRSAEDGHATTGEGMDWGVLFGFGPGLTVETVVLHSVPITA 394          
BLAST of EY756906 vs. ExPASy Swiss-Prot
Match: CHS7_SORBI (Chalcone synthase 7 OS=Sorghum bicolor GN=CHS7 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.361e-17
Identity = 40/44 (90.91%), Postives = 42/44 (95.45%), Query Frame = 1
Query:   13 LDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 144
            LDEMRK+SAEE +ATTGEG DWGVLFGFGPGLTVETVVLHSVPI
Sbjct:  350 LDEMRKRSAEEGQATTGEGFDWGVLFGFGPGLTVETVVLHSVPI 393          
BLAST of EY756906 vs. ExPASy Swiss-Prot
Match: CHS2_RUTGR (Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.001e-17
Identity = 41/46 (89.13%), Postives = 42/46 (91.30%), Query Frame = 1
Query:   13 LDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 150
            LDEMRKK AEE +ATTGEGLDWGVLFGFGPGLTVETVVL SVPI A
Sbjct:  348 LDEMRKKCAEEGRATTGEGLDWGVLFGFGPGLTVETVVLRSVPINA 393          
BLAST of EY756906 vs. ExPASy Swiss-Prot
Match: CHS2_DAUCA (Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.001e-17
Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 1
Query:   13 LDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 141
            LDEMRKKS EE KATTG+GLDWGVLFGFGPGLTVETVVLHSVP
Sbjct:  350 LDEMRKKSIEEGKATTGDGLDWGVLFGFGPGLTVETVVLHSVP 392          
BLAST of EY756906 vs. ExPASy Swiss-Prot
Match: CHS1_RUTGR (Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.001e-17
Identity = 41/46 (89.13%), Postives = 42/46 (91.30%), Query Frame = 1
Query:   13 LDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 150
            LDEMRK  AEE +ATTGEGLDWGVLFGFGPGLTVETVVL SVPIKA
Sbjct:  348 LDEMRKNCAEEGRATTGEGLDWGVLFGFGPGLTVETVVLRSVPIKA 393          
The following BLAST results are available for this feature:
BLAST of EY756906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
CHS2_CITSI2.571e-1997.83Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=... [more]
CHSY_PETCR3.143e-1795.35Chalcone synthase OS=Petroselinum crispum GN=CHS P... [more]
CHS4_SORBI4.105e-1790.91Chalcone synthase 4 OS=Sorghum bicolor GN=CHS4 PE=... [more]
CHS2_MAIZE4.105e-1790.91Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1[more]
CHSY_ORYSJ5.361e-1786.96Chalcone synthase OS=Oryza sativa subsp. japonica ... [more]
CHSY_ORYSI5.361e-1786.96Chalcone synthase OS=Oryza sativa subsp. indica GN... [more]
CHS7_SORBI5.361e-1790.91Chalcone synthase 7 OS=Sorghum bicolor GN=CHS7 PE=... [more]
CHS2_RUTGR7.001e-1789.13Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=... [more]
CHS2_DAUCA7.001e-1793.02Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 ... [more]
CHS1_RUTGR7.001e-1789.13Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-015-A04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756906 ID=EY756906; Name=EY756906; organism=Citrus sinensis; type=EST; length=413bp
CCACGCGTCCGCCTTGACGAGATGAGAAAGAAGTCTGCTGAGGAAGCGAA
AGCCACCACCGGCGAAGGGCTAGATTGGGGTGTGCTGTTCGGGTTCGGGC
CGGGGCTCACCGTCGAGACCGTTGTGCTGCACAGTGTCCCCATCAAAGCT
TGAAGTGAGAACTCCATCAGTATGTTTAGTAGTTCAGTAACTTTATGTTG
TATGCTTTCACTCTTGAATTATTGGTTGATCGTGTGAAGGTTTAGTTTTG
TCAATTGAATTTAAGGCATCGTACCTTTTCTCTTATGACGTCATCAAACC
TGGGCAACGCTTTGTGTTTATGCATAAATTCTTGGGAATTTGAGAAAGCA
ATAAATTTGTAACNGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAANNNNNA
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