EY756765

Overview
NameEY756765
Unique NameEY756765
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length538
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY756765 vs. ExPASy Swiss-Prot
Match: FB248_ARATH (F-box protein At4g35930 OS=Arabidopsis thaliana GN=At4g35930 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.434e-26
Identity = 63/95 (66.32%), Postives = 73/95 (76.84%), Query Frame = 3 
Query:    6 RPPFVSKGEGRGVLMPSPHTPKAPKHGPRPPSRMKITEMRQIAAVLFQD-SAFPSRCMVPSVLPKP-LCKSLASN--RVLFYEDELCQAVAQNKL 278
            R PF  +G+G   ++ SPHTPKAPKH PRPPSR K+ EM+QI AVLFQD + FPSRC+VPSVL +P L K +A    RVLFYEDELCQAVAQN L
Sbjct:  227 RWPF-RRGDGNPTMVSSPHTPKAPKHAPRPPSRTKLAEMKQITAVLFQDQTPFPSRCIVPSVLQRPTLFKPMAPKHPRVLFYEDELCQAVAQNNL 320
The following BLAST results are available for this feature:
BLAST of EY756765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FB248_ARATH5.434e-2666.32F-box protein At4g35930 OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-D08-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756765 ID=EY756765; Name=EY756765; organism=Citrus sinensis; type=EST; length=538bp
CCACGCGTCCGCCTTTTGTGAGCAAGGGTGAAGGAAGGGGTGTATTGATG
CCAAGTCCCCATACTCCAAAAGCCCCAAAGCATGGTCCCCGGCCACCTTC
TCGCATGAAAATCACTGAGATGCGACAAATTGCTGCAGTCCTTTTCCAAG
ATTCCGCATTCCCTTCGAGGTGTATGGTACCATCTGTTCTGCCAAAGCCC
CTTTGCAAATCTTTGGCCTCTAATCGAGTTCTATTCTATGAGGACGAGTT
ATGCCAGGCTGTTGCTCAGAATAAGCTACGTTGATTTCATCCTGTGGCAA
CCGTCTCATTGCCTCGACTTTATGTGTATAGTTTGGTTCCTATAGTATTA
TGGTTTTAGTTAGTTAGAATAGGGGGCATGCAATTTTGTAGCAGTGCTGG
GAGTGCTAGGTCATAAGAAACTCCAGGTTTGCAATAGGAGTTTGATCAAT
TTAGATAATGCATGTGGGAATAATGTATTCGGAACTGGTTATCTGTATAT
TTTTCACATAAGTTAAAGAATGTCTAGTTTTTTAAAAA
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