Ciclev10025311m.g, Ciclev10025311m.g (gene) Citrus clementina

Gene Overview


Name	Ciclev10025311m.g
Unique Name	Ciclev10025311m.g
Type	gene
Organism	Citrus clementina (Clementine)
Sequence length	3245

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
Citrus clementina genome v1.0 (JGI)	2012-12-20

Publications


Year	Publication
2022	Mattia MR, Du D, Yu Q, Kahn T, Roose M, Hiraoka Y, Wang Y, Munoz P, Gmitter FG. Genome-Wide Association Study of Healthful Flavonoids among Diverse Mandarin Accessions.. Plants (Basel, Switzerland). 2022 Jan 25; 11(3).

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
Ciclev10025311m	PAC:20799988	Citrus clementina	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
gene from alignment at scaffold_7:1492717..1495961+

gene sequence

>Ciclev10025311m.g ID=Ciclev10025311m.g; Name=Ciclev10025311m.g; organism=Citrus clementina; type=gene; length=3245bp
ATGGCCTTAGACTTGGTGAATGAAATTCTTCCATGGTTTTTTATTTTGAC
GAACGGAGACTGGTTATTCACAAGATCGGCCTTCGTCACAGTTGCAGCGG
CAGCAATACTAGTGGCGGGAGTGTTGGGCTACCTGTATGGGCCTTACTGC
AAAGTTAGGAGGGTTCCTGGCCCTCCACCAATCCCTCTAGTAGGACACAT
TCCCCTTTTGGCTAGGTATGGCCCTGAAGTGTTTTCAGTTCTTGCCAAAC
GATACGGCCCCATTTTCAGGTTAGTTTTTGCAGTTTTTGTTCATTCATGT
TCATTATTTAGACTTATCAACGGTGTGCCGTGTGCTTTCTTTTTCTTCTT
TAATAATATCAGAAAGTAATATCTGTCCATAATATTTTAATTTCCAGAAT
AACTAGTACATCGAAAGTCTGAATACATCTGGATGTATATACATGTCCGA
AAAGTACTATTGTAACATGCTATGCCCATATATGTTAACTGATAAATTAT
ACGGTACCGAATAAATCAATTTATAAGGTATGCTTAGCAATCAAGCAATG
AACAATAATCCAAACGTCTGTATTACGTGTTAATCTTTTTTTTTTTTTTT
ATAGTAATTCTATTCTGTAAATATATGATCTTCAGTGTTTTTTTAAAACA
TTTGATTAAATGAAAATAAGATAAACGTGTGTTTAAGTTTGAAAGCGAAC
AACTACTTAGTGTCATTTGGATTGATAATGTATTAATCTAGTAGATATGA
TCCACTTCTGATTGAAACATTTCTCATATATATATATACACAGACACACA
TACATCCAATAGCAGTGTGAAAGCACTTTCAATTAATTCTCCAGTTAATT
TAGAAAACATATTTATTTCTTATTTACGTATTAAAGCACTTTCTATGAAA
TATCCGATAACGATTTGTTATAGCATGATTCTTTAGTTCTCCGAAAAGCA
TATTTGTGATTCTTTAGCTTTCTAAAGAGCATATTTTTATGATTTGTTGC
AAGCGGGGTGTTTGTGTATTAACTAATACGAATGAAATAAGATAATTTAT
ACAATTAAACCTAACTATATTTAATAACTGCTGTCAAATTAAATTCACTA
AATATTACGTTATCTTAAAATCATAAGTTGTGTAAAACAATCATGTGTGC
TGCCAAACTCAAGCTATTAAGTATTCACCAAACACTTTGGCAGCACAGTT
GACAAACAGCACCAAAATAAAGAGAGGCTAAGCATTGGCGAGGTAGTGGT
GAAATATAATGACTGGCCTTGTAATTTTCATGAAGCAGGTTTCATATGGG
TAGACAACCTCTGATAATTGTGGCCGATCCGGAGCTTTGCAGAGAAGTTG
GAATAAAAAAGTTCAAAGACATTCCAAACAGAAGCGTTCCTTCTCCCATT
GCAGCTTCTCCTCTCCATCAGAAGGGTCTTTTTTTCACAAGGTATTTTCA
AATAATCATGCAAAATTTCTTCACAACAAAGAGGAAGTTGCGGATACCTC
TGTTGTTGCAGTGTAATCATTCAGTACTATTATATATGCGTTTATGTTCG
GTGCTTGTGAAATTGCAGGGATGGGAGGTGGTCCGCAATGCGAAACACAA
TATTGTCATTCTATCAGCCCACTCATCTGGCTAGTCTAGTGCCCACCATG
CAGTCCATCATTGAATCTGCAACACAGAATATTGAGTCCTCCAATGTACA
AAACATCACTTTCTCTAATCTGGCTCTCACGTTGGCCACTGATACTATCG
GACAAGCTGCTTTTGGAGTCAACTTTGGCCTTTCATCAAAACCTGAGTCC
ATCACTGATTCAATTGGCATTGCTGATAACCAAAGAGATGGAAATGCAGT
CTTGGACTTCATCAATCAGCACATCTACTCTACCACCCAACTTAAGATGG
ATCTATCAGGCTCTCTCTCGATCATATTAGGCCTACTCATCCCCATAATT
CAGGAGCCATTTAGACAGATTCTTAAGAGAATACCTGGCACCATGGACTG
GAAAGTTGAAAGGACTAATCAGAAATTGAGCGGCCGGCTTGATGAAATTG
TATTCAAAAGAATGAAAGAGAGCAAACAAGGATCCAAGGACTTGTTGTCA
CTCATTGTGAAGGCAAGGGAATTGGAGACAGAGTCCAAGAATGTCTTTAC
TCCTGACTACATCAGTGCAGTAACTTACGAGCACCTGCTTGCTGGATCAG
CAACCACATCTTTTGCGTTATCTTCGATTGTATACTTAGTAGCTGCACAT
CCAGAAGTTGAGAACAAGCTGCTTGCAGAGATTGATGGGTTTGGTCGTAG
GGAACTTGTGCCAACCGCTCTTGATCTTCAACAGAAATTTCCCTATCTTG
ATCAGGCAAGGCTTATTTTATTTTCAATTTATGAGCAATTAATAAAATAA
TGGAAAAGCCATAAATTCTTTAATGGCCTGTTTACATTTCATTTACAGGT
GATAAAAGAAGCCATGAGGATTTATCTAGTATCCCCATTAGTTGCTAGAG
AAACAGCAAAAGAAGTGGAGATAGGTGGTTACCGTCTCCCCAAGGTATTG
TTGTCAATGTCACATATATAATGAAGGATAAAACTAAAGTAACGGTTGTG
CCGTAACTAGTGATACTAATTAAACTTTATGACTCCGGGTGGGCAGGGGA
CATGGGTGTGGCTAGCACTAGGTGTAGTGGCAAAAGATTCAAAGAACTTC
CCAGAACCAGACAAGTTCAAGCCAGAGAGGTTCGATCCAAATTGTGAAGA
AGCGAAGCAGAGGCATCCTTGTGCATACCTACCGTTTGGAATTGGACCCC
GAGCATGCATTGGGCAGAAATTCGCCATGCAAGAAATAAAGCTCTCGCTG
ATACATTTATACAGGAATTATGTATTTCGACATTCTCCTGACATGGAAAA
TCCTTTGGAACTTGAGTTCGGCATAATCCTCAACTTCAAGCACGGGGTCA
AGCTCCGTGTCCTGAGCCGAACTTCAAGGCTCTAATATCGCCTTTGACTT
TTCTTAACTTCTTCGATATCTTGCGTACAATAAGCCGTTTGTGAAATAAT
TCCGTTCACAGAGCAATGAATCTACATTAAACTTATATATGAGAACATTG
TTCTGGGCTGCTGGCATGTAATGAACTCTCTAGTTTATCCAAAGCAAGTA
AGCTACTTCTAAAACTTGTCATGATGTTGAACTAAAATCCAGGGATTTAC
TAAAGACTCATTTTGGTTAACTCAGAAACGAGAGGCCAATTTTGT

gene from alignment at scaffold_7:1492717..1495961+

Legend: mRNAgenetic_marker

Hold the cursor over a type above to highlight its positions in the sequence below.

> ID=; Name=; organism= ; type=; length=3245bp; location=Sequence derived from: scaffold_7:1492717..1495961+ (Citrus clementina
ATGGCCTTAGACTTGGTGAATGAAATTCTTCCATGGTTTTTTATTTTGAC
GAACGGAGACTGGTTATTCACAAGATCGGCCTTCGTCACAGTTGCAGCGG
CAGCAATACTAGTGGCGGGAGTGTTGGGCTACCTGTATGGGCCTTACTGC
AAAGTTAGGAGGGTTCCTGGCCCTCCACCAATCCCTCTAGTAGGACACAT
TCCCCTTTTGGCTAGGTATGGCCCTGAAGTGTTTTCAGTTCTTGCCAAAC
GATACGGCCCCATTTTCAGGTTAGTTTTTGCAGTTTTTGTTCATTCATGT
TCATTATTTAGACTTATCAACGGTGTGCCGTGTGCTTTCTTTTTCTTCTT
TAATAATATCAGAAAGTAATATCTGTCCATAATATTTTAATTTCCAGAAT
AACTAGTACATCGAAAGTCTGAATACATCTGGATGTATATACATGTCCGA
AAAGTACTATTGTAACATGCTATGCCCATATATGTTAACTGATAAATTAT
ACGGTACCGAATAAATCAATTTATAAGGTATGCTTAGCAATCAAGCAATG
AACAATAATCCAAACGTCTGTATTACGTGTTAATCTTTTTTTTTTTTTTT
ATAGTAATTCTATTCTGTAAATATATGATCTTCAGTGTTTTTTTAAAACA
TTTGATTAAATGAAAATAAGATAAACGTGTGTTTAAGTTTGAAAGCGAAC
AACTACTTAGTGTCATTTGGATTGATAATGTATTAATCTAGTAGATATGA
TCCACTTCTGATTGAAACATTTCTCATATATATATATACACAGACACACA
TACATCCAATAGCAGTGTGAAAGCACTTTCAATTAATTCTCCAGTTAATT
TAGAAAACATATTTATTTCTTATTTACGTATTAAAGCACTTTCTATGAAA
TATCCGATAACGATTTGTTATAGCATGATTCTTTAGTTCTCCGAAAAGCA
TATTTGTGATTCTTTAGCTTTCTAAAGAGCATATTTTTATGATTTGTTGC
AAGCGGGGTGTTTGTGTATTAACTAATACGAATGAAATAAGATAATTTAT
ACAATTAAACCTAACTATATTTAATAACTGCTGTCAAATTAAATTCACTA
AATATTACGTTATCTTAAAATCATAAGTTGTGTAAAACAATCATGTGTGC
TGCCAAACTCAAGCTATTAAGTATTCACCAAACACTTTGGCAGCACAGTT
GACAAACAGCACCAAAATAAAGAGAGGCTAAGCATTGGCGAGGTAGTGGT
GAAATATAATGACTGGCCTTGTAATTTTCATGAAGCAGGTTTCATATGGG
TAGACAACCTCTGATAATTGTGGCCGATCCGGAGCTTTGCAGAGAAGTTG
GAATAAAAAAGTTCAAAGACATTCCAAACAGAAGCGTTCCTTCTCCCATT
GCAGCTTCTCCTCTCCATCAGAAGGGTCTTTTTTTCACAAGGTATTTTCA
AATAATCATGCAAAATTTCTTCACAACAAAGAGGAAGTTGCGGATACCTC
TGTTGTTGCAGTGTAATCATTCAGTACTATTATATATGCGTTTATGTTCG
GTGCTTGTGAAATTGCAGGGATGGGAGGTGGTCCGCAATGCGAAACACAA
TATTGTCATTCTATCAGCCCACTCATCTGGCTAGTCTAGTGCCCACCATG
CAGTCCATCATTGAATCTGCAACACAGAATATTGAGTCCTCCAATGTACA
AAACATCACTTTCTCTAATCTGGCTCTCACGTTGGCCACTGATACTATCG
GACAAGCTGCTTTTGGAGTCAACTTTGGCCTTTCATCAAAACCTGAGTCC
ATCACTGATTCAATTGGCATTGCTGATAACCAAAGAGATGGAAATGCAGT
CTTGGACTTCATCAATCAGCACATCTACTCTACCACCCAACTTAAGATGG
ATCTATCAGGCTCTCTCTCGATCATATTAGGCCTACTCATCCCCATAATT
CAGGAGCCATTTAGACAGATTCTTAAGAGAATACCTGGCACCATGGACTG
GAAAGTTGAAAGGACTAATCAGAAATTGAGCGGCCGGCTTGATGAAATTG
TATTCAAAAGAATGAAAGAGAGCAAACAAGGATCCAAGGACTTGTTGTCA
CTCATTGTGAAGGCAAGGGAATTGGAGACAGAGTCCAAGAATGTCTTTAC
TCCTGACTACATCAGTGCAGTAACTTACGAGCACCTGCTTGCTGGATCAG
CAACCACATCTTTTGCGTTATCTTCGATTGTATACTTAGTAGCTGCACAT
CCAGAAGTTGAGAACAAGCTGCTTGCAGAGATTGATGGGTTTGGTCGTAG
GGAACTTGTGCCAACCGCTCTTGATCTTCAACAGAAATTTCCCTATCTTG
ATCAGGCAAGGCTTATTTTATTTTCAATTTATGAGCAATTAATAAAATAA
TGGAAAAGCCATAAATTCTTTAATGGCCTGTTTACATTTCATTTACAGGT
GATAAAAGAAGCCATGAGGATTTATCTAGTATCCCCATTAGTTGCTAGAG
AAACAGCAAAAGAAGTGGAGATAGGTGGTTACCGTCTCCCCAAGGTATTG
TTGTCAATGTCACATATATAATGAAGGATAAAACTAAAGTAACGGTTGTG
CCGTAACTAGTGATACTAATTAAACTTTATGACTCCGGGTGGGCAGGGGA
CATGGGTGTGGCTAGCACTAGGTGTAGTGGCAAAAGATTCAAAGAACTTC
CCAGAACCAGACAAGTTCAAGCCAGAGAGGTTCGATCCAAATTGTGAAGA
AGCGAAGCAGAGGCATCCTTGTGCATACCTACCGTTTGGAATTGGACCCC
GAGCATGCATTGGGCAGAAATTCGCCATGCAAGAAATAAAGCTCTCGCTG
ATACATTTATACAGGAATTATGTATTTCGACATTCTCCTGACATGGAAAA
TCCTTTGGAACTTGAGTTCGGCATAATCCTCAACTTCAAGCACGGGGTCA
AGCTCCGTGTCCTGAGCCGAACTTCAAGGCTCTAATATCGCCTTTGACTT
TTCTTAACTTCTTCGATATCTTGCGTACAATAAGCCGTTTGTGAAATAAT
TCCGTTCACAGAGCAATGAATCTACATTAAACTTATATATGAGAACATTG
TTCTGGGCTGCTGGCATGTAATGAACTCTCTAGTTTATCCAAAGCAAGTA
AGCTACTTCTAAAACTTGTCATGATGTTGAACTAAAATCCAGGGATTTAC
TAAAGACTCATTTTGGTTAACTCAGAAACGAGAGGCCAATTTTGT