CX286905

Overview
NameCX286905
Unique NameCX286905
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length577
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286905 vs. ExPASy Swiss-Prot
Match: FA63A_RAT (Protein FAM63A OS=Rattus norvegicus GN=Fam63a PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.114e-29
Identity = 61/126 (48.41%), Postives = 84/126 (66.67%), Query Frame = 1
Query:  199 KAIQFLGRTTPIILQNDNGPCPLLAICNVLLLRNNLTLSPDTGEISQEKLLSLVAERLIDSNSNVNNKDAGYVENQQQNIADAIDLLPRLATGIDVNIKFRRIDDFEFTPECAIFDLLDIPLYHGW 576
            K I + G  TPII Q+ NGPCPLLAI N+L L+  + L P    I+ ++LL+ +   L+        K  G   N QQN+ DA+ +LP+LATG+DVN++F  + DFE+TPEC++FDLL +PLYHGW
Sbjct:  131 KWIPWKGERTPIITQSSNGPCPLLAIMNILFLQWKVKLPPQKEVITSDELLTHLGNCLLSIKPQ--EKSEGLQLNFQQNVGDAMTVLPKLATGLDVNVRFTGVSDFEYTPECSVFDLLGVPLYHGW 254          
BLAST of CX286905 vs. ExPASy Swiss-Prot
Match: FA63A_MOUSE (Protein FAM63A OS=Mus musculus GN=Fam63a PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 7.985e-29
Identity = 63/126 (50.00%), Postives = 84/126 (66.67%), Query Frame = 1
Query:  199 KAIQFLGRTTPIILQNDNGPCPLLAICNVLLLRNNLTLSPDTGEISQEKLLSLVAERLIDSNSNVNNKDAGYVENQQQNIADAIDLLPRLATGIDVNIKFRRIDDFEFTPECAIFDLLDIPLYHGW 576
            K I + G  TPII Q+ NGPCPLLAI N+L L+  + L P    I+ ++LL+ +   L+        K  G   N QQN+ DA+ +LP+LATG+DVN++F  + DFE+TPEC+IFDLL IPLYHGW
Sbjct:  117 KWIPWKGERTPIITQSTNGPCPLLAIMNILFLQWKVKLPPQKEVITSDELLTHLGNCLLSIKPQ--EKSEGLQLNFQQNVDDAMTVLPKLATGLDVNVRFTGVSDFEYTPECSIFDLLGIPLYHGW 240          
BLAST of CX286905 vs. ExPASy Swiss-Prot
Match: FA63A_HUMAN (Protein FAM63A OS=Homo sapiens GN=FAM63A PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.779e-28
Identity = 61/126 (48.41%), Postives = 84/126 (66.67%), Query Frame = 1
Query:  199 KAIQFLGRTTPIILQNDNGPCPLLAICNVLLLRNNLTLSPDTGEISQEKLLSLVAERLIDSNSNVNNKDAGYVENQQQNIADAIDLLPRLATGIDVNIKFRRIDDFEFTPECAIFDLLDIPLYHGW 576
            K I + G  TPII Q+ NGPCPLLAI N+L L+  + L P    I+ ++L++ +   L+        K  G   N QQN+ DA+ +LP+LATG+DVN++F  + DFE+TPEC++FDLL IPLYHGW
Sbjct:  117 KWIPWKGEQTPIITQSTNGPCPLLAIMNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQ--EKSEGLQLNFQQNVDDAMTVLPKLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGW 240          
BLAST of CX286905 vs. ExPASy Swiss-Prot
Match: FA63A_BOVIN (Protein FAM63A OS=Bos taurus GN=FAM63A PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.779e-28
Identity = 60/126 (47.62%), Postives = 85/126 (67.46%), Query Frame = 1
Query:  199 KAIQFLGRTTPIILQNDNGPCPLLAICNVLLLRNNLTLSPDTGEISQEKLLSLVAERLIDSNSNVNNKDAGYVENQQQNIADAIDLLPRLATGIDVNIKFRRIDDFEFTPECAIFDLLDIPLYHGW 576
            K I + G  TPII Q+ NGPCPL+AI N+L L+  + L P    I+ ++L++ + + L+        K  G   N QQN+ DA+ +LP+LATG+DVN++F  + DFE+TPEC++FDLL IPLYHGW
Sbjct:  117 KWIPWKGEQTPIITQSANGPCPLIAIANILFLQWKVKLPPQKEVITSDELMAHLGDCLLSIKPQ--EKSEGLQLNFQQNVDDAMTVLPKLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGW 240          
BLAST of CX286905 vs. ExPASy Swiss-Prot
Match: FA63A_PONAB (Protein FAM63A OS=Pongo abelii GN=FAM63A PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.176e-28
Identity = 61/126 (48.41%), Postives = 83/126 (65.87%), Query Frame = 1
Query:  199 KAIQFLGRTTPIILQNDNGPCPLLAICNVLLLRNNLTLSPDTGEISQEKLLSLVAERLIDSNSNVNNKDAGYVENQQQNIADAIDLLPRLATGIDVNIKFRRIDDFEFTPECAIFDLLDIPLYHGW 576
            K I + G  TPII Q+ NGPCPLLAI N+L L+  + L P    I+ ++L++ +   L+        K  G   N QQN+ DA+ +LP+LATG+DVN +F  + DFE+TPEC++FDLL IPLYHGW
Sbjct:  117 KWIPWKGERTPIITQSTNGPCPLLAIMNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQ--EKSEGLQLNFQQNVDDAMTVLPKLATGLDVNARFTGVSDFEYTPECSVFDLLGIPLYHGW 240          
BLAST of CX286905 vs. ExPASy Swiss-Prot
Match: FA63B_BOVIN (Protein FAM63B OS=Bos taurus GN=FAM63B PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.153e-27
Identity = 62/134 (46.27%), Postives = 90/134 (67.16%), Query Frame = 1
Query:  181 ECMHKTKAIQFLGRTTPIILQNDNGPCPLLAICNVLLLRNNLTLSPDTGEISQEKLLSLVAERLIDSNSNVNNKDAGYVE--NQQQNIADAIDLLPRLATGIDVNIKFRRIDDFEFTPECAIFDLLDIPLYHGW 576
            + ++  K IQ+    TPII QN+NGPCPLLAI NVLLL   + L P    I+ E+L+  + + ++D+      K+   ++  N +QN++DA+ +L +L TG+DVN+KF  +  FE+TPEC +FDLLDIPLYHGW
Sbjct:  241 QSVYHIKWIQWKEENTPIITQNENGPCPLLAILNVLLLAWKVKLPPMMEIITAEQLMEYLGDYMLDTKP----KEISEIQRLNYEQNMSDAMAVLHKLQTGLDVNVKFTGVRVFEYTPECIVFDLLDIPLYHGW 370          
BLAST of CX286905 vs. ExPASy Swiss-Prot
Match: FA63B_HUMAN (Protein FAM63B OS=Homo sapiens GN=FAM63B PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 1.967e-27
Identity = 61/134 (45.52%), Postives = 90/134 (67.16%), Query Frame = 1
Query:  181 ECMHKTKAIQFLGRTTPIILQNDNGPCPLLAICNVLLLRNNLTLSPDTGEISQEKLLSLVAERLIDSNSNVNNKDAGYVE--NQQQNIADAIDLLPRLATGIDVNIKFRRIDDFEFTPECAIFDLLDIPLYHGW 576
            + ++  K IQ+    TPII QN+NGPCPLLAI NVLLL   + L P    I+ E+L+  + + ++D+      K+   ++  N +QN++DA+ +L +L TG+DVN++F  +  FE+TPEC +FDLLDIPLYHGW
Sbjct:  240 QSVYHIKWIQWKEENTPIITQNENGPCPLLAILNVLLLAWKVKLPPMMEIITAEQLMEYLGDYMLDAKP----KEISEIQRLNYEQNMSDAMAILHKLQTGLDVNVRFTGVRVFEYTPECIVFDLLDIPLYHGW 369          
BLAST of CX286905 vs. ExPASy Swiss-Prot
Match: FA63A_DANRE (Protein FAM63A OS=Danio rerio GN=fam63a PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.967e-27
Identity = 58/126 (46.03%), Postives = 86/126 (68.25%), Query Frame = 1
Query:  199 KAIQFLGRTTPIILQNDNGPCPLLAICNVLLLRNNLTLSPDTGEISQEKLLSLVAERLIDSNSNVNNKDAGYVENQQQNIADAIDLLPRLATGIDVNIKFRRIDDFEFTPECAIFDLLDIPLYHGW 576
            K I +  + T +I Q++NGPCPL+AI N+LLLR  +     T  ++ E+L++ + E ++        K  G   N QQN++DA+ +LP+L+TG+DVN++F  + DFE+TPEC +FDLLDIPLYHGW
Sbjct:  169 KWITWKEKKTAVITQSENGPCPLIAIMNILLLRWKVKFPAQTEVVTTEELMAHLGECVLSIKPR--EKAEGMELNFQQNMSDAMAVLPKLSTGLDVNVRFTGVSDFEYTPECIVFDLLDIPLYHGW 292          
BLAST of CX286905 vs. ExPASy Swiss-Prot
Match: FA63B_MOUSE (Protein FAM63B OS=Mus musculus GN=Fam63b PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.722e-27
Identity = 60/134 (44.78%), Postives = 90/134 (67.16%), Query Frame = 1
Query:  181 ECMHKTKAIQFLGRTTPIILQNDNGPCPLLAICNVLLLRNNLTLSPDTGEISQEKLLSLVAERLIDSNSNVNNKDAGYVE--NQQQNIADAIDLLPRLATGIDVNIKFRRIDDFEFTPECAIFDLLDIPLYHGW 576
            + ++  K IQ+    TPII QN+NGPCPLLAI NVLLL   + L P    I+ E+L+  + + ++++      K+   ++  N +QN++DA+ +L +L TG+DVN++F  +  FE+TPEC +FDLLDIPLYHGW
Sbjct:  218 QSVYHIKWIQWKEENTPIITQNENGPCPLLAILNVLLLAWKVKLPPMMEIITAEQLMEYLGDYMLEAKP----KEISEIQRVNYEQNMSDAMAILHKLQTGLDVNVRFTGVRVFEYTPECIVFDLLDIPLYHGW 347          
BLAST of CX286905 vs. ExPASy Swiss-Prot
Match: YP191_YEAST (Uncharacterized protein YPL191C OS=Saccharomyces cerevisiae GN=YPL191C PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.757e-13
Identity = 46/136 (33.82%), Postives = 74/136 (54.41%), Query Frame = 1
Query:  196 TKAIQFLGRTTPIILQNDNGPCPLLAICNVLLLRNNLTLSPDTGEISQEKLLSLVAERLIDSNSNVNNKDAGYV---------ENQQQNIADAIDLLPRLATGIDVNIKFRRIDDFEFTPECAIFDLLDIPLYHGW 576
            TK+++  G+   I+LQN+NGPC LLA+ N+L+      LSPD    S E +      RL++  S ++ K+   V         +    +I++ + LLPRL  G+++N +F     FE T E +IF L ++ + HGW
Sbjct:    7 TKSVKINGQNHRILLQNENGPCALLALANILI------LSPDHTRFSNELI------RLVNKGSQISLKELIEVLADIALQVTDKPSTDISELLSLLPRLHEGLNINPEFN--GSFENTKEMSIFRLFNVDVVHGW 128          
The following BLAST results are available for this feature:
BLAST of CX286905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
FA63A_RAT6.114e-2948.41Protein FAM63A OS=Rattus norvegicus GN=Fam63a PE=2... [more]
FA63A_MOUSE7.985e-2950.00Protein FAM63A OS=Mus musculus GN=Fam63a PE=1 SV=1[more]
FA63A_HUMAN1.779e-2848.41Protein FAM63A OS=Homo sapiens GN=FAM63A PE=1 SV=1[more]
FA63A_BOVIN1.779e-2847.62Protein FAM63A OS=Bos taurus GN=FAM63A PE=2 SV=1[more]
FA63A_PONAB5.176e-2848.41Protein FAM63A OS=Pongo abelii GN=FAM63A PE=2 SV=1[more]
FA63B_BOVIN1.153e-2746.27Protein FAM63B OS=Bos taurus GN=FAM63B PE=2 SV=1[more]
FA63B_HUMAN1.967e-2745.52Protein FAM63B OS=Homo sapiens GN=FAM63B PE=1 SV=2[more]
FA63A_DANRE1.967e-2746.03Protein FAM63A OS=Danio rerio GN=fam63a PE=3 SV=1[more]
FA63B_MOUSE5.722e-2744.78Protein FAM63B OS=Mus musculus GN=Fam63b PE=1 SV=1[more]
YP191_YEAST2.757e-1333.82Uncharacterized protein YPL191C OS=Saccharomyces c... [more]
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Properties
Property NameValue
Genbank descriptionC01002D07Rv Veg1 Citrus clementina cDNA clone C01002D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286905 ID=CX286905; Name=CX286905; organism=Citrus clementina; type=EST; length=577bp
CTCGTGCCGAATTCGGCACGAGGCTGGAGTCTGTTTTAAAAGCCTTCTCC
CGTGTGATCACATCCAAAATTACCAGTTTTATTCTTTATTTTTTATTTCT
TTTTTCTCTCGTAAAAAATCAAAGAAACAATGGATGAATCCAGCGAGGAA
CAGCAACAGCAACAACCAACAGCGATGAAAGAGTGCATGCACAAAACGAA
GGCTATACAGTTCTTAGGTCGAACGACACCAATTATTCTGCAAAACGACA
ATGGACCTTGTCCTCTCCTTGCCATCTGTAATGTTCTTCTGTTGAGGAAC
AATCTGACTTTGAGTCCAGATACAGGGGAAATATCACAAGAGAAATTGCT
TTCGCTGGTGGCTGAACGGCTTATTGATTCTAACAGTAATGTCAATAATA
AAGATGCTGGGTATGTTGAAAATCAGCAGCAGAATATTGCGGATGCTATT
GATTTGCTTCCGCGCCTTGCAACTGGAATTGATGTAAATATAAAATTTAG
GAGGATAGATGATTTTGAGTTTACACCAGAGTGTGCGATATTTGATCTAC
TTGACATCCCCCTCTATCATGGTTGGA
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