CX286978

Overview
NameCX286978
Unique NameCX286978
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286978 vs. ExPASy Swiss-Prot
Match: MDARP_ARATH (Monodehydroascorbate reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g63940 PE=2 SV=3)

HSP 1 Score: 363.614 bits (932), Expect = 5.037e-100
Identity = 176/216 (81.48%), Postives = 195/216 (90.28%), Query Frame = 1
Query:   10 ERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLTTNSGKLLKYGSLIVATGCTASRFPDKIGGNLPGVHYIRDVADADALISSLEKAKKXXXXXXXYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 657
            ERPALTK YLFP +KKPARLPGFHTCVG GGERQTP+WYKEKGIE+IY+DPV   D EKQTLTT++GK LKYGSLI+ATGCTASRFPDKIGG+LPGVHYIR+VADAD+LI+SL KAKK       YIGMEVAAAAV W LDTTI+FPE+ LLQRLFTPSLAQ+YE+LY+QNGVKFVKGASI NLEAGSDGRV+AVKL DGSTI+ADT+VIGIGAKP
Sbjct:  101 ERPALTKAYLFPPEKKPARLPGFHTCVGGGGERQTPDWYKEKGIEVIYEDPVAGADFEKQTLTTDAGKQLKYGSLIIATGCTASRFPDKIGGHLPGVHYIREVADADSLIASLGKAKKIVIVGGGYIGMEVAAAAVAWNLDTTIVFPEDQLLQRLFTPSLAQKYEELYRQNGVKFVKGASINNLEAGSDGRVSAVKLADGSTIEADTVVIGIGAKP 316          
BLAST of CX286978 vs. ExPASy Swiss-Prot
Match: MDAR2_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 2 OS=Arabidopsis thaliana GN=At3g27820 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.302e-47
Identity = 96/220 (43.64%), Postives = 143/220 (65.00%), Query Frame = 1
Query:   10 ERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLTTNSGKLLKYGSLIVATGCTASRFPD--KIGGNLPGVHYIRDVADADALISSLEKAKKXXXXXXX--YIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 657
            ERPAL+KG+L P  + PARLP FHTCVG+  E+ TP+WYK+ GIE++    V S+D+ ++TL +++G+ + Y  LI+ATG  A +  +    G +   V Y+RD+ADA+ L + ++ +           YIGME AA+ V  K++ T++FPE H + RLFTP +A  YE  Y+  GVKF+KG  + + E  S+ +V AV L+DGS + AD +V+GIG +P
Sbjct:   45 ERPALSKGFLLP--EAPARLPSFHTCVGANDEKLTPKWYKDHGIELVLGTRVKSVDVRRKTLLSSTGETISYKFLIIATGARALKLEEFGVEGSDAENVCYLRDLADANRLATVIQSSSNGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASLYEDYYRAKGVKFIKGTVLTSFEFDSNKKVTAVNLKDGSHLPADLVVVGIGIRP 262          
BLAST of CX286978 vs. ExPASy Swiss-Prot
Match: MDAR_PEA (Monodehydroascorbate reductase OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.206e-46
Identity = 94/220 (42.73%), Postives = 132/220 (60.00%), Query Frame = 1
Query:   10 ERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLTTNSGKLLKYGSLIVATGCTASRFPD--KIGGNLPGVHYIRDVADADALISSLEKAK--KXXXXXXXYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 657
            ERPAL+K YLFP  + PARLPGFHTCVGSGGER  PEWY EKGI++     + S D+  + L + +G+   Y +L++ATG    R  D   IG N   + Y+R+V DAD L  ++++ K  K       YIG+E++A      LD T+++PE   + RLFT  +A  YE  Y   G+  +KG       A SDG V  VKL+DG  ++AD +++G+G +P
Sbjct:   45 ERPALSKAYLFP--ESPARLPGFHTCVGSGGERLLPEWYSEKGIQLYLSTEIVSADLAAKFLKSANGEHFDYQTLVIATGSAVIRLTDFGVIGANAKNIFYLREVDDADKLYEAIKRKKNAKRVVVGGGYIGLELSAVLKLNDLDVTMVYPEPWCMPRLFTSEIAAFYEGYYANKGINIIKGTVAVGFTANSDGEVKEVKLKDGRVLEADIVIVGVGGRP 262          
BLAST of CX286978 vs. ExPASy Swiss-Prot
Match: MDARS_CUCSA (Monodehydroascorbate reductase, seedling isozyme OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 9.329e-46
Identity = 95/221 (42.99%), Postives = 134/221 (60.63%), Query Frame = 1
Query:   10 ERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLTTNSGKLLKYGSLIVATGCTASRFPD--KIGGNLPGVHYIRDVADADALISSLEKAK---KXXXXXXXYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 657
            ERPAL+K YLFP  + PARLPGFH CVGSGGER  P+WYKEKGIE+I    +   D+  + L +  GK+  Y +LI+ATG T  +  D    G +   + Y+R++ DAD L+ ++ KAK   K       YIG+E+ AA      D ++++PE   + RLFTP +A  YE  Y Q G+  +KG         ++G V  VKL+DG  ++AD +V+G+GA+P
Sbjct:   46 ERPALSKAYLFP--ESPARLPGFHVCVGSGGERLLPDWYKEKGIELILSTEIVEADLPAKRLRSAHGKIYNYQTLIIATGSTVIKLSDFGVQGADAKNIFYLREIDDADQLVEAI-KAKENGKVVVVGGGYIGLELGAALRINNFDVSMVYPEPWCMPRLFTPEIAAFYEGYYAQKGITIIKGTVAVGFTVDTNGEVKEVKLKDGRVLEADIVVVGVGARP 263          
BLAST of CX286978 vs. ExPASy Swiss-Prot
Match: MDAR3_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 3 OS=Arabidopsis thaliana GN=At3g52880 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.545e-45
Identity = 95/220 (43.18%), Postives = 135/220 (61.36%), Query Frame = 1
Query:   10 ERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLTTNSGKLLKYGSLIVATGCTASRFPD--KIGGNLPGVHYIRDVADADALISSLEKAK--KXXXXXXXYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 657
            ERPAL+KGYLFP  +  ARLPGFH CVGSGGE+  PE YK+KGIE+I    +   D+  ++L + +G + KY +LI+ATG T  R  D    G +   + Y+R++ DAD L+ +++  K  K       YIG+E++A      LD T++FPE   + RLFT  +A  YE  Y   GVK +KG       A  +G V  V+L+DG T++AD +++G+GAKP
Sbjct:   46 ERPALSKGYLFP--EGAARLPGFHCCVGSGGEKLLPESYKQKGIELILSTEIVKADLSAKSLVSATGDVFKYQTLIIATGSTVLRLTDFGVKGADSKNILYLREIDDADKLVEAIKAKKGGKAVVVGGGYIGLELSAVLRINNLDVTMVFPEPWCMPRLFTADIAAFYETYYTNKGVKIIKGTVASGFTAQPNGEVKEVQLKDGRTLEADIVIVGVGAKP 263          
BLAST of CX286978 vs. ExPASy Swiss-Prot
Match: MDAR_SOLLC (Monodehydroascorbate reductase OS=Solanum lycopersicum GN=AFRR PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.119e-44
Identity = 90/220 (40.91%), Postives = 132/220 (60.00%), Query Frame = 1
Query:   10 ERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLTTNSGKLLKYGSLIVATGCTASRFPD--KIGGNLPGVHYIRDVADADALISSLEKAK--KXXXXXXXYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 657
            ERPAL+K YLFP  +  ARLPGFH CVGSGGERQ PEWY EKGI +I    +   D+  +TL + +G+  KY +L++ATG T  +  D    G +   + Y+R++ DAD L+ +L+  K  K       YIG+E++A      ++  +++PE   + RLFT  +A  YE  Y+  GV  +KG      +   +G V  VKL+DG  ++AD +V+G+GA+P
Sbjct:   46 ERPALSKAYLFP--EGAARLPGFHVCVGSGGERQLPEWYAEKGISLILSTEIVKADLASKTLVSAAGESFKYQTLVIATGTTVLKLSDFGVQGADSKNIFYLREIDDADQLVEALKAKKNGKAVVVGGGYIGLELSAVLRLNNIEVNMVYPEPWCMPRLFTEGIAAFYEGYYKNKGVNIIKGTVAVGFDTHPNGEVKEVKLKDGRVLEADIVVVGVGARP 263          
BLAST of CX286978 vs. ExPASy Swiss-Prot
Match: MDAR4_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 4 OS=Arabidopsis thaliana GN=At5g03630 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.056e-41
Identity = 87/220 (39.55%), Postives = 128/220 (58.18%), Query Frame = 1
Query:   10 ERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLTTNSGKLLKYGSLIVATGCTASRFPD--KIGGNLPGVHYIRDVADADALISSLEKAKKXXXXXXX--YIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 657
            ERPAL+KGY+   +K  A LP F+   G GGERQ P+WYKEKGIE+I    +   D+  +TL + +G++ KY +L+ ATG +  R  D    G +   + Y+R++ DAD L  ++E  +K         YIG+E+ AA     LD T+++PE   + RLFT  +A  YE  Y   G+  VKG         S+G V  VKL+DG T++AD +++G+G +P
Sbjct:   47 ERPALSKGYIHLENK--ATLPNFYVAAGIGGERQFPQWYKEKGIELILGTEIVKADLAAKTLVSGTGQVFKYQTLLAATGSSVIRLSDFGVPGADAKNIFYLRELEDADYLAYAMETKEKGKAVVVGGGYIGLELGAALKANNLDVTMVYPEPWCMPRLFTAGIASFYEGYYANKGINIVKGTVASGFTTNSNGEVTEVKLKDGRTLEADIVIVGVGGRP 264          
BLAST of CX286978 vs. ExPASy Swiss-Prot
Match: MDAR1_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 1 OS=Arabidopsis thaliana GN=At3g09940 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.034e-36
Identity = 81/222 (36.49%), Postives = 127/222 (57.21%), Query Frame = 1
Query:   10 ERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLTTNSGKLLKYGSLIVATGCTASRFPDKIG---GNLPGVHYIRDVADADALISSLE---KAKKXXXXXXXYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 657
            ERP LTK Y+  L+  P  L   + C G+G  +Q P WYKEKGI++I    +   D+  +TL ++ GK+ KY +L++ATG T  R  + IG    ++  + Y+R++ D+D L  ++E   +  K       ++G+E+++A      + T++FPE  L+ R FT  +A  YE  Y   G+K +KG         SDG V  VKLEDG T++A+ +V G+GA+P
Sbjct:   47 ERPELTKVYI-DLEVNPT-LANIYVCAGTGEAKQYPNWYKEKGIDLIVGTEIVKADLASKTLVSDDGKIYKYQTLLIATGSTNIRLSE-IGVQEADVKNIFYLREIEDSDELALAMELYVQRGKAVIIGGGFLGLEISSALRANNHEVTMVFPEPWLVHRFFTAEIASFYESYYANKGIKIIKGTVATGFSTNSDGEVTEVKLEDGRTLEANIVVAGVGARP 265          
BLAST of CX286978 vs. ExPASy Swiss-Prot
Match: THCD_RHOER (Rhodocoxin reductase OS=Rhodococcus erythropolis GN=thcD PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.959e-19
Identity = 64/217 (29.49%), Postives = 102/217 (47.00%), Query Frame = 1
Query:   10 ERPALTKGYLFP-LDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLTTNSGKLLKYGSLIVATGCTASRFPDKIGGNLPGVHYIRDVADADALISSLEKAKKXXXXXXXYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 657
            +RP L+K YL    D++   L             +  +++ +  I +    PV  ID + Q +       ++Y  LI+ATG      P   G NLPGVHY+R   +A++L SS+            +IG+EVAAAA    LD T++   +  + R  +  ++  +   + ++GV       +K + A +DGR A V    G  I AD +V+GIG  P
Sbjct:   40 QRPPLSKAYLHSDPDRESLAL-------------RPAQYFDDHRITLTCGKPVVRIDRDAQRVELIDATAIEYDHLILATGARNRLLPVP-GANLPGVHYLRTAGEAESLTSSMASCSSLVVIGAGFIGLEVAAAARKKGLDVTVVEAMDRPMARALSSVMSGYFSTAHTEHGVHMRLSTGVKTINA-ADGRAAGVTTNSGDVIHADAVVVGIGVVP 241          
BLAST of CX286978 vs. ExPASy Swiss-Prot
Match: RURE_PSEOL (Rubredoxin-NAD(+) reductase OS=Pseudomonas oleovorans GN=alkT PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.444e-19
Identity = 65/219 (29.68%), Postives = 104/219 (47.49%), Query Frame = 1
Query:    4 RGERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE-WYKEKGIEMIYQDPVTSIDIEKQTLTTNSGKLLKYGSLIVATGCTASRFPDKIGGNLPGVHYIRDVADADALISSLEKAKKXXXXXXXYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 657
            +GE    ++  + P  + P       + +        PE +Y    I +    P+ SID+ ++ +++  GK   Y  LI+AT  +A R   + G  L GV Y+R + DA  L   L ++          IG+EVA+AAVG     T+I     ++ R+ TP+ A       +  G++F   A + +++ G +G V    LE G  I AD IV+GIGA P
Sbjct:   25 KGEIRIFSRESVAPYQRPPLSKAFLTSEIAESAVPLKPEGFYTNNNITISLNTPIVSIDVGRKIVSSKDGKEYAYEKLILATPASARRLTCE-GSELSGVCYLRSMEDAKNLRRKLVESASVVVLGGGVIGLEVASAAVGLGKRVTVIEATPRVMARVVTPAAANLVRARLEAEGIEFKLNAKLTSIK-GRNGHVEQCVLESGEEIQADLIVVGIGAIP 241          
The following BLAST results are available for this feature:
BLAST of CX286978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
MDARP_ARATH5.037e-10081.48Monodehydroascorbate reductase, chloroplastic OS=A... [more]
MDAR2_ARATH1.302e-4743.64Probable monodehydroascorbate reductase, cytoplasm... [more]
MDAR_PEA3.206e-4642.73Monodehydroascorbate reductase OS=Pisum sativum PE... [more]
MDARS_CUCSA9.329e-4642.99Monodehydroascorbate reductase, seedling isozyme O... [more]
MDAR3_ARATH3.545e-4543.18Probable monodehydroascorbate reductase, cytoplasm... [more]
MDAR_SOLLC5.119e-4440.91Monodehydroascorbate reductase OS=Solanum lycopers... [more]
MDAR4_ARATH4.056e-4139.55Probable monodehydroascorbate reductase, cytoplasm... [more]
MDAR1_ARATH1.034e-3636.49Probable monodehydroascorbate reductase, cytoplasm... [more]
THCD_RHOER1.959e-1929.49Rhodocoxin reductase OS=Rhodococcus erythropolis G... [more]
RURE_PSEOL7.444e-1929.68Rubredoxin-NAD(+) reductase OS=Pseudomonas oleovor... [more]

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Properties
Property NameValue
Genbank descriptionC01003C01SK Veg1 Citrus clementina cDNA clone C01003C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286978 ID=CX286978; Name=CX286978; organism=Citrus clementina; type=EST; length=658bp
GCACGAGGTGAGCGTCCGGCTTTGACAAAAGGTTACTTGTTTCCCCTTGA
CAAAAAGCCGGCGCGTTTACCTGGTTTTCATACTTGTGTTGGATCTGGTG
GCGAGAGACAAACACCTGAGTGGTACAAAGAGAAAGGAATAGAGATGATT
TATCAAGATCCTGTGACAAGCATTGACATTGAAAAGCAAACGTTAACAAC
AAATTCAGGCAAACTGCTTAAGTATGGATCCCTTATAGTGGCTACTGGAT
GCACAGCCTCAAGATTTCCAGATAAAATCGGAGGGAACCTACCTGGAGTC
CACTATATTCGAGATGTGGCAGATGCTGACGCACTGATATCGTCTTTGGA
GAAAGCAAAGAAGGTGGTTGTTGTTGGTGGTGGTTATATTGGCATGGAAG
TTGCTGCGGCAGCAGTCGGTTGGAAACTTGATACAACGATTATATTCCCA
GAGAATCACCTGTTGCAAAGATTGTTTACTCCTTCACTTGCTCAGAGATA
TGAACAATTATACCAACAGAATGGTGTCAAATTTGTTAAGGGTGCCTCCA
TAAAAAACTTAGAAGCTGGTTCTGACGGACGTGTAGCTGCTGTTAAACTT
GAAGATGGATCAACCATAGATGCAGACACAATTGTTATTGGTATTGGAGC
AAAACCTA
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