CX286980
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RABD1_ARATH (Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 1.787e-88 Identity = 159/180 (88.33%), Postives = 172/180 (95.56%), Query Frame = 3 Query: 84 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTAN 623 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADD+Y+DSYISTIGVDFKIRT+E DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYD TEMESFNNVKQWL+EIDRYAN+SVCKLL+GNK D+VE+KVV T+T +A ADELGIPFLETSAKD+INVEQAFLT+AGEIKKKMG+Q AN Sbjct: 1 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNAN 180
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 306.605 bits (784), Expect = 6.576e-83 Identity = 149/180 (82.78%), Postives = 164/180 (91.11%), Query Frame = 3 Query: 84 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTAN 623 M+ EYDYLFKLLLIGDS VGKSCLLLRFADDSY++SYISTIGVDFKIRTVE DGKTIKLQIWDTAGQERFRTITSSYYRGAHGII+VYDVT+ ESFNNVKQWLNEIDRYA+++V KLLVGNKCDL EN+VV + KA ADE+GIPFLETSAKDA NVE+AF+TMAGEIK +M +QP N Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATN 180
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: YPTM2_MAIZE (GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 7.271e-82 Identity = 150/179 (83.80%), Postives = 163/179 (91.06%), Query Frame = 3 Query: 84 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTA 620 M+ EYDYLFKLLLIGDS VGKSCLLLRFADDSY+DSYISTIGVDFKIRTVE DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVT+ ESFNNVKQWLNEIDRYA+D+V KLLVGNK DL NKVV T+TAKAFADE+GIPF+ETSAK+A NV+QAF+ MA IK +M +QP A Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAA 179
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 303.138 bits (775), Expect = 7.271e-82 Identity = 149/177 (84.18%), Postives = 165/177 (93.22%), Query Frame = 3 Query: 84 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKK-KMGNQ 611 MSNE+DYLFKLLLIGDSSVGKSC LLRFADDSYVDSYISTIGVDFKIRTVE++GKT+KLQIWDTAGQERFRTITSSYYRGAHGIIIVYD+T+MESFNNVKQWL+EIDRYANDSV KLLVGNKCDL EN+ VDT A+A+A E+GIPFLETSAK++INVE+AFL M+ IKK K G+Q Sbjct: 1 MSNEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQ 177
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB1_DISOM (Ras-related protein ORAB-1 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 8.039e-81 Identity = 148/179 (82.68%), Postives = 161/179 (89.94%), Query Frame = 3 Query: 84 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTA 620 M+ EYDYLFKLLLIGDS VGKSCLLLRFADD+Y +SYISTIGVDFKIRT+ELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGII+VYDVT+ ESFNNVKQWL EIDRYA+++V KLLVGNKCDL KVVD TAK FAD LGIPFLETSAK+A NVEQAF+TMA EIKK+MG T+ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATS 179
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB1A_RAT (Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3) HSP 1 Score: 299.671 bits (766), Expect = 8.039e-81 Identity = 148/179 (82.68%), Postives = 161/179 (89.94%), Query Frame = 3 Query: 84 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTA 620 M+ EYDYLFKLLLIGDS VGKSCLLLRFADD+Y +SYISTIGVDFKIRT+ELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGII+VYDVT+ ESFNNVKQWL EIDRYA+++V KLLVGNKCDL KVVD TAK FAD LGIPFLETSAK+A NVEQ+F+TMA EIKK+MG TA Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATA 182
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB1A_MOUSE (Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3) HSP 1 Score: 299.671 bits (766), Expect = 8.039e-81 Identity = 148/179 (82.68%), Postives = 161/179 (89.94%), Query Frame = 3 Query: 84 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTA 620 M+ EYDYLFKLLLIGDS VGKSCLLLRFADD+Y +SYISTIGVDFKIRT+ELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGII+VYDVT+ ESFNNVKQWL EIDRYA+++V KLLVGNKCDL KVVD TAK FAD LGIPFLETSAK+A NVEQ+F+TMA EIKK+MG TA Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATA 182
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB1A_HUMAN (Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3) HSP 1 Score: 299.671 bits (766), Expect = 8.039e-81 Identity = 148/179 (82.68%), Postives = 161/179 (89.94%), Query Frame = 3 Query: 84 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTA 620 M+ EYDYLFKLLLIGDS VGKSCLLLRFADD+Y +SYISTIGVDFKIRT+ELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGII+VYDVT+ ESFNNVKQWL EIDRYA+++V KLLVGNKCDL KVVD TAK FAD LGIPFLETSAK+A NVEQ+F+TMA EIKK+MG TA Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATA 182
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RAB1A_CANFA (Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3) HSP 1 Score: 299.671 bits (766), Expect = 8.039e-81 Identity = 148/179 (82.68%), Postives = 161/179 (89.94%), Query Frame = 3 Query: 84 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTA 620 M+ EYDYLFKLLLIGDS VGKSCLLLRFADD+Y +SYISTIGVDFKIRT+ELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGII+VYDVT+ ESFNNVKQWL EIDRYA+++V KLLVGNKCDL KVVD TAK FAD LGIPFLETSAK+A NVEQ+F+TMA EIKK+MG TA Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATA 182
BLAST of CX286980 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3) HSP 1 Score: 299.286 bits (765), Expect = 1.050e-80 Identity = 146/180 (81.11%), Postives = 163/180 (90.56%), Query Frame = 3 Query: 84 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTAN 623 M+ EYDYLFKLLLIGDS VGKSCLLLRF+DDSYV+SYISTIGVDFKIRTVE DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVT+ ESFNNVKQWL+EIDRYA+D+V KLLVGNK DL EN+ + +TAKAFADE+GIPF+ETSAKDA NVEQAF+ M+ IK++M +QP N Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGN 180 The following BLAST results are available for this feature:
BLAST of CX286980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286980 ID=CX286980; Name=CX286980; organism=Citrus clementina; type=EST; length=625bpback to top |