CX287013
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287013 vs. ExPASy Swiss-Prot
Match: SODF_SOYBN (Superoxide dismutase [Fe], chloroplastic OS=Glycine max GN=SODB PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.874e-33 Identity = 70/101 (69.31%), Postives = 76/101 (75.25%), Query Frame = -2 Query: 254 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWD-YSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKAPAT 553 QFGSGWAWL Y+ P P E D L+V+K+PNAVNPLVW Y PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSW++VS RLE AKA T Sbjct: 147 QFGSGWAWLAYRARKFDGENVANPPSPDE-DNKLVVLKSPNAVNPLVWGGYYPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWDAVSSRLEQAKALIT 246
BLAST of CX287013 vs. ExPASy Swiss-Prot
Match: SODF_NICPL (Superoxide dismutase [Fe], chloroplastic (Fragment) OS=Nicotiana plumbaginifolia GN=SODB PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 8.653e-30 Identity = 63/97 (64.95%), Postives = 72/97 (74.23%), Query Frame = -2 Query: 263 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 553 QFGSGWAWL YK ++K L +VKTPNA NPLV Y+PLLTIDVWEHAYYLDFQNRRPDYIS+FM+KLVSWE+VS RL++A A Sbjct: 122 QFGSGWAWLAYKP----------------EEKKLALVKTPNAENPLVLGYTPLLTIDVWEHAYYLDFQNRRPDYISIFMEKLVSWEAVSSRLKAATA 202
BLAST of CX287013 vs. ExPASy Swiss-Prot
Match: SODF_ARATH (Superoxide dismutase [Fe], chloroplastic OS=Arabidopsis thaliana GN=SODB PE=1 SV=4) HSP 1 Score: 120.168 bits (300), Expect = 6.856e-27 Identity = 61/97 (62.89%), Postives = 66/97 (68.04%), Query Frame = -2 Query: 263 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 553 QFG+GWAWL Y ++ L VVKTPNAVNPLV PLLTIDVWEHAYYLDFQNRRPDYI FM LVSWE+VS RLE+AKA Sbjct: 131 QFGAGWAWLAYS------------------NEKLKVVKTPNAVNPLVLGSFPLLTIDVWEHAYYLDFQNRRPDYIKTFMTNLVSWEAVSARLEAAKA 209
BLAST of CX287013 vs. ExPASy Swiss-Prot
Match: SODF_PLEBO (Superoxide dismutase [Fe] OS=Plectonema boryanum GN=sodB PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19 Identity = 48/92 (52.17%), Postives = 57/92 (61.96%), Query Frame = -2 Query: 278 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 553 QFGSGWAWLV + +L V KTPNA NPLV PLLT+DVWEHAYYLDFQN RP +I F+D LV+W+ V++ L Sbjct: 124 QFGSGWAWLV------------------DDGGTLKVTKTPNAENPLVHGQKPLLTLDVWEHAYYLDFQNARPAFIKNFLDNLVNWDFVAQNL 197
BLAST of CX287013 vs. ExPASy Swiss-Prot
Match: SODF_SYNY3 (Superoxide dismutase [Fe] OS=Synechocystis sp. (strain PCC 6803) GN=sodB PE=1 SV=3) HSP 1 Score: 95.5153 bits (236), Expect = 1.808e-19 Identity = 48/95 (50.53%), Postives = 60/95 (63.16%), Query Frame = -2 Query: 269 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 553 QFGSGWAWLV + +L V KT NA NP+ +PLLT+DVWEHAYYLD+QNRRPDYI+ F+ KLV+W+ V+ L +A Sbjct: 123 QFGSGWAWLVLD------------------NGTLKVTKTGNAENPMTAGQTPLLTMDVWEHAYYLDYQNRRPDYIADFLGKLVNWDFVAANLAAA 199
BLAST of CX287013 vs. ExPASy Swiss-Prot
Match: SODF_SYNE7 (Superoxide dismutase [Fe] OS=Synechococcus elongatus (strain PCC 7942) GN=sodB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.872e-19 Identity = 47/97 (48.45%), Postives = 58/97 (59.79%), Query Frame = -2 Query: 263 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 553 QFGSGWAWLV + +L + KT NA P+ +PLLTIDVWEHAYYLD+QNRRPDYIS F++KL +W+ S +A A Sbjct: 123 QFGSGWAWLVLD------------------NGTLKITKTGNADTPIAHGQTPLLTIDVWEHAYYLDYQNRRPDYISTFVEKLANWDFASANYAAAIA 201
BLAST of CX287013 vs. ExPASy Swiss-Prot
Match: SODF_RHOCA (Superoxide dismutase [Fe] OS=Rhodobacter capsulatus GN=sodB PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.975e-19 Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = -2 Query: 278 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 553 QFGSGWAWLV + D +L + KT N VNPL + + LL DVWEH+YY+DF+N+RP Y++ F+DKLV+WE+V+ R+ Sbjct: 126 QFGSGWAWLV-----------------KDSDGALKITKTENGVNPLCFGQTALLGCDVWEHSYYIDFRNKRPAYLTNFLDKLVNWENVASRM 200
BLAST of CX287013 vs. ExPASy Swiss-Prot
Match: SODF_RICCN (Superoxide dismutase [Mn/Fe] OS=Rickettsia conorii GN=sodB PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.771e-17 Identity = 38/92 (41.30%), Postives = 53/92 (57.61%), Query Frame = -2 Query: 278 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 553 QFGSGWAWL+Y D L ++KT NA P+ PLL DVWEHAYY+D++N+RPDY+ +F+ +++W+ V L Sbjct: 134 QFGSGWAWLIYH------------------DNRLQIIKTANAGTPIAHGMKPLLACDVWEHAYYIDYRNKRPDYVDIFIKHMINWKFVEDNL 207
BLAST of CX287013 vs. ExPASy Swiss-Prot
Match: SODF_RICBR (Superoxide dismutase [Mn/Fe] OS=Rickettsia bellii (strain RML369-C) GN=sodB PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.771e-17 Identity = 40/92 (43.48%), Postives = 53/92 (57.61%), Query Frame = -2 Query: 278 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 553 QFGSGWAWLVY + L +VKT NA P+ PLL DVWEHAYY+D++N+RPDY+ +F+ +++WE V L Sbjct: 134 QFGSGWAWLVYH------------------NNRLQIVKTANAGTPIANGMQPLLACDVWEHAYYIDYRNKRPDYVDIFIKHMINWEFVENNL 207
BLAST of CX287013 vs. ExPASy Swiss-Prot
Match: SODF_RHIME (Superoxide dismutase [Mn] OS=Rhizobium meliloti GN=sodB PE=1 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 3.771e-17 Identity = 41/95 (43.16%), Postives = 57/95 (60.00%), Query Frame = -2 Query: 269 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 553 QFGSGWAWL S K+ L + KTPN NPLV +P+L +DVWEH+YY+D++N RP Y+ F+D L++W+ V + E+A Sbjct: 122 QFGSGWAWL------------------SVKNGKLEISKTPNGENPLVHGATPILGVDVWEHSYYIDYRNARPKYLEAFVDNLINWDYVLELYEAA 198 The following BLAST results are available for this feature:
BLAST of CX287013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287013 ID=CX287013; Name=CX287013; organism=Citrus clementina; type=EST; length=554bpback to top |