CX287014
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287014 vs. ExPASy Swiss-Prot
Match: DME_ARATH (Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME PE=1 SV=2) HSP 1 Score: 259.225 bits (661), Expect = 1.343e-68 Identity = 131/213 (61.50%), Postives = 155/213 (72.77%), Query Frame = 1 Query: 25 LPLPLTH--ATDLPVGKLEIAVNNCXXXXXXXXXXXXXRVQVSENDIEDTFC-EDPEEIPTIKLNMKEFTQTLQNYMQENLELQEGDMSKALVALTAGAASIPAPKLKNVSRLRTEHQVYELPDSHPLLRGMEKREPDDPGRYLLAIWTPGETANSIQPPESRCSSQEHGKMCDEKTCFSCNSVRESEFQIVRGTILIPCRTAMRGSFPLNGT 654 LPLPL A+ P + NC +++E+DIED + EDP+EIPTIKLN+++F TL+ +M+ N+ELQEGDMSKALVAL SIP PKLKN+SRLRTEHQVYELPDSH LL GM+KREPDDP YLLAIWTPGETANS QPPE +C + GKMC ++TC CNS+RE+ Q VRGT+LIPCRTAMRGSFPLNGT Sbjct: 1689 LPLPLEKSLASGAPSNR-----ENCEPIIEEPASPGQECTEITESDIEDAYYNEDPDEIPTIKLNIEQFGMTLREHMERNMELQEGDMSKALVALHPTTTSIPTPKLKNISRLRTEHQVYELPDSHRLLDGMDKREPDDPSPYLLAIWTPGETANSAQPPEQKCGGKASGKMCFDETCSECNSLREANSQTVRGTLLIPCRTAMRGSFPLNGT 1896
BLAST of CX287014 vs. ExPASy Swiss-Prot
Match: ROS1_ARATH (Protein ROS1 OS=Arabidopsis thaliana GN=ROS1 PE=1 SV=2) HSP 1 Score: 255.758 bits (652), Expect = 1.485e-67 Identity = 123/172 (71.51%), Postives = 142/172 (82.56%), Query Frame = 1 Query: 139 QVSENDIEDTFCEDPEEIPTIKLNMKEFTQTLQNYMQENLELQEGDMSKALVALTAGAASIPAPKLKNVSRLRTEHQVYELPDSHPLLRGMEKREPDDPGRYLLAIWTPGETANSIQPPESRCSSQEHGKMCDEKTCFSCNSVRESEFQIVRGTILIPCRTAMRGSFPLNGT 654 +VS DIE+ F EDPEEIPTI+LNM FT L+ M+ N ELQ+G+MS ALVALTA AS+P PKLKN+S+LRTEH+VYELPD HPLL +EKREPDDP YLLAIWTPGETA+SIQP S C Q +G +CDE+TCFSCNS++E+ QIVRGTILIPCRTAMRGSFPLNGT Sbjct: 1128 EVSIADIEEAFFEDPEEIPTIRLNMDAFTSNLKKIMEHNKELQDGNMSSALVALTAETASLPMPKLKNISQLRTEHRVYELPDEHPLLAQLEKREPDDPCSYLLAIWTPGETADSIQPSVSTCIFQANGMLCDEETCFSCNSIKETRSQIVRGTILIPCRTAMRGSFPLNGT 1299
BLAST of CX287014 vs. ExPASy Swiss-Prot
Match: DML2_ARATH (DEMETER-like protein 2 OS=Arabidopsis thaliana GN=DML2 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 9.074e-41 Identity = 95/182 (52.20%), Postives = 113/182 (62.09%), Query Frame = 1 Query: 148 ENDIEDT--------FCEDPEE----IPTIKLNMKEFTQTLQNYMQENLELQEGDMSKALVALTAGAASIPAPKLKNVSRLRTEHQVYELPDSHPLLRGMEKREPDDPGRYLLAIWTPGETANSIQPPESRCS-SQEHGKMCDEKTCFSCNSVRESEFQIVRGTILIPCRTAMRGSFPLNGT 654 E+DIED EDP E IPTI LN + T + + +E S LV L+ AA+IP KLK +LRTEH V+ELPD H +L G E+RE +D YLLAIWTPGET NSIQPP+ RC+ + + +C+E CF CN RE E Q VRGTILIPCRTAMRG FPLNGT Sbjct: 1040 EHDIEDYPRDKNNVGTSEDPWENKDVIPTIILNKEAGTS------HDLVVNKEAGTSHDLVVLSTYAAAIPRRKLKIKEKLRTEHHVFELPDHHSILEGFERREAEDIVPYLLAIWTPGETVNSIQPPKQRCALFESNNTLCNENKCFQCNKTREEESQTVRGTILIPCRTAMRGGFPLNGT 1215
BLAST of CX287014 vs. ExPASy Swiss-Prot
Match: DML3_ARATH (DEMETER-like protein 3 OS=Arabidopsis thaliana GN=DML3 PE=2 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.658e-34 Identity = 83/184 (45.11%), Postives = 113/184 (61.41%), Query Frame = 1 Query: 133 RVQVSEN-DIEDT----FCEDPEEIPTIKLNMKEFTQTLQNYMQENLELQEGD--MSKALVALTAGAASIPAP---KLKNVSRLRTEHQVYELPDSHPLLRGMEKREPDDPGRYLLAIWTPGETANSIQPPESRCSSQEHGKMCDEKTCFSCNSVRESEFQIVRGTILIPCRTAMRGSFPLNGT 654 R ++ E+ DIED + +P I ++ +++++ + + + D +SKALV T A IP K+K +RLRTEH VY LPD+H LL E+R+ DDP YLLAIW PGET++S PP+ +CSS + K+C K C C ++RE I RGTILIPCRTAMRG+FPLNGT Sbjct: 766 RAEIPESTDIEDVPFMNLYQSYASVPKIDFDLDALKKSVEDALVISGRMSSSDEEISKALVIPTPENACIPIKPPRKMKYYNRLRTEHVVYVLPDNHELLHDFERRKLDDPSPYLLAIWQPGETSSSFVPPKKKCSS-DGSKLCKIKNCSYCWTIREQNSNIFRGTILIPCRTAMRGAFPLNGT 948 The following BLAST results are available for this feature:
BLAST of CX287014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287014 ID=CX287014; Name=CX287014; organism=Citrus clementina; type=EST; length=654bpback to top |