CX287017
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287017 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 3.150e-41 Identity = 64/84 (76.19%), Postives = 75/84 (89.29%), Query Frame = 2 Query: 2 TKPPAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKP 253 T PP VCDNYY+CP+S TCCC++EYG C+AWGCCPLE ATCCDDHYSCCPH+YPICNV+ GTCLM+KD+PL V+AL+RT AKP Sbjct: 361 TPPPTVCDNYYTCPDSTTCCCIYEYGKYCYAWGCCPLEGATCCDDHYSCCPHEYPICNVQQGTCLMAKDSPLAVKALKRTLAKP 444
BLAST of CX287017 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 4.115e-41 Identity = 62/90 (68.89%), Postives = 78/90 (86.67%), Query Frame = 2 Query: 5 KPPAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQ 274 KPP CD+YY+CPESNTCCC+FEYG CFAWGCCPLEAATCCDD+YSCCPH+YP+C++ GTCL+SK++P V+AL+R PA P+W+ G + Sbjct: 370 KPPTQCDSYYTCPESNTCCCLFEYGKYCFAWGCCPLEAATCCDDNYSCCPHEYPVCDLDQGTCLLSKNSPFSVKALKRKPATPFWSQGRK 459
BLAST of CX287017 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.370e-36 Identity = 60/91 (65.93%), Postives = 69/91 (75.82%), Query Frame = 2 Query: 5 KPPAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQG 277 KPP CD Y C TCCC+ ++ SCF+WGCCPLE ATCC+DHYSCCPHDYPICNVR GTC MSK NPLGV+A++R A+P A GN G Sbjct: 251 KPPTECDEYSQCAVGTTCCCILQFRRSCFSWGCCPLEGATCCEDHYSCCPHDYPICNVRQGTCSMSKGNPLGVKAMKRILAQPIGAFGNGG 341
BLAST of CX287017 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 5.574e-30 Identity = 51/81 (62.96%), Postives = 61/81 (75.31%), Query Frame = 2 Query: 8 PPAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAK 250 P VCD+ +SCP +TCCC F + N C WGCCP+E ATCC DH SCCP DYP+CN RAGTC SK++PL V+AL+RT AK Sbjct: 382 PDHVCDDNFSCPAGSTCCCAFGFRNLCLVWGCCPVEGATCCKDHASCCPPDYPVCNTRAGTCSASKNSPLSVKALKRTLAK 462
BLAST of CX287017 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 5.969e-24 Identity = 42/86 (48.84%), Postives = 52/86 (60.47%), Query Frame = 2 Query: 8 PPAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRA----LRRTPAKP 253 PP CD Y CP TCCC + N C WGCCP+E ATCC DH +CCP +YP+CN +A TC SK++P +R R P +P Sbjct: 391 PPQQCDRYSKCPAGTTCCCNYGIRNHCIVWGCCPVEGATCCKDHSTCCPKEYPVCNAKARTCSKSKNSPYNIRTPAAMARSVPEQP 476 The following BLAST results are available for this feature:
BLAST of CX287017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287017 ID=CX287017; Name=CX287017; organism=Citrus clementina; type=EST; length=514bpback to top |