CX287126

Overview
NameCX287126
Unique NameCX287126
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length570
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13920 contig Ccv1_Contig13920:495..1064. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 340.117 bits (871), Expect = 4.557e-93
Identity = 160/190 (84.21%), Postives = 169/190 (88.95%), Query Frame = 1
Query:    1 EALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWG 570
            EALP+SVDWR KGAVAE+KDQG CGSCWAFS IAAVEGIN+IVTG LISLSEQELVDCDTSYNEGCNGGLMDYAF+FII+NGGIDTEDDYPYK  D  CD  RKNAKVVTID YEDV  N E +LQKAVANQPVSVAIE GG AFQLY SGIFTG+CGT+LDHGV AVGYGTENG DYWIV+NSWG SWG
Sbjct:  127 EALPESVDWRTKGAVAEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQPVSVAIEAGGRAFQLYSSGIFTGKCGTALDHGVAAVGYGTENGKDYWIVRNSWGKSWG 316          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 1.123e-91
Identity = 153/190 (80.53%), Postives = 169/190 (88.95%), Query Frame = 1
Query:    1 EALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWG 570
            + LP+S+DWRKKGAVAEVKDQG CGSCWAFSTI AVEGIN+IVTG LI+LSEQELVDCDTSYNEGCNGGLMDYAFEFII NGGIDT+ DYPYK +DG+CD  RKNAKVVTID YEDVP   E++L+KAVA+QP+S+AIE GG AFQLY+SGIF G CGT LDHGV AVGYGTENG DYWIV+NSWG SWG
Sbjct:  135 DELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQLYDSGIFDGSCGTQLDHGVVAVGYGTENGKDYWIVRNSWGKSWG 324          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 313.153 bits (801), Expect = 5.966e-85
Identity = 141/188 (75.00%), Postives = 166/188 (88.30%), Query Frame = 1
Query:    1 EALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSS 564
            ++LP+S+DWR+KG +  VKDQGSCGSCWAFS +AA+E IN IVTG+LISLSEQELVDCD SYNEGC+GGLMDYAFEF+I NGGIDTE+DYPYK  +G CD YRKNAKVV ID YEDVP+N+EKALQKAVA+QPVS+A+E GG  FQ Y+SGIFTG+CGT++DHGV   GYGTENG DYWIV+NSWG++
Sbjct:   16 DSLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDRSYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPYKERNGVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAHQPVSIALEAGGRDFQHYKSGIFTGKCGTAVDHGVVIAGYGTENGMDYWIVRNSWGAN 203          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 311.227 bits (796), Expect = 2.267e-84
Identity = 143/191 (74.87%), Postives = 165/191 (86.39%), Query Frame = 1
Query:    1 EALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTS-YNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWG 570
            E LP+SVDWR+KGAVA VK+QG CGSCWAFS ++ VE IN++VTG +I+LSEQELV+C T+  N GCNGGLMD AF+FII NGGIDTEDDYPYKA+DG CD  R+NAKVV+ID +EDVP NDEK+LQKAVA+QPVSVAIE GG  FQLY SG+F+GRCGTSLDHGV AVGYGT+NG DYWIV+NSWG  WG
Sbjct:  139 EELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGRCGTSLDHGVVAVGYGTDNGKDYWIVRNSWGPKWG 329          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 303.908 bits (777), Expect = 3.619e-82
Identity = 136/188 (72.34%), Postives = 161/188 (85.64%), Query Frame = 1
Query:    7 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWG 570
            +P++VDWR+KGAV  +KDQG+CGSCWAFST AAVEGINKIVTG LISLSEQELVDCD SYN+GCNGGLMDYAF+FI+ NGG++TE DYPY+   G C+++ KN++VV+ID YEDVP  DE AL+KA++ QPVSVAIE GG  FQ Y+SGIFTG CGT+LDH V AVGYG+ENG DYWIV+NSWG  WG
Sbjct:  145 VPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRVVSIDGYEDVPTKDETALKKAISYQPVSVAIEAGGRIFQHYQSGIFTGSCGTNLDHAVVAVGYGSENGVDYWIVRNSWGPRWG 332          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 1.375e-81
Identity = 135/190 (71.05%), Postives = 163/190 (85.79%), Query Frame = 1
Query:    1 EALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWG 570
            + +P +VDWR+KGAV  +KDQG+CGSCWAFST AAVEGINKIVTG L+SLSEQELVDCD SYN+GCNGGLMDYAF+FI+ NGG++TE DYPY   +G C++  KN++VVTID YEDVP  DE AL++AV+ QPVSVAI+ GG AFQ Y+SGIFTG+CGT++DH V AVGYG+ENG DYWIV+NSWG+ WG
Sbjct:   98 DEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGKCNSLLKNSRVVTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFTGKCGTNMDHAVVAVGYGSENGVDYWIVRNSWGTRWG 287          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 289.271 bits (739), Expect = 9.225e-78
Identity = 129/190 (67.89%), Postives = 157/190 (82.63%), Query Frame = 1
Query:    1 EALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWG 570
            EA+P SVDWRKKGAVAEVK+QGSCGSCWAFST+AAVEGINKIVTG+L +LSEQEL+DCDT+YN GCNGGLMDYAFE+I+ NGG+  E+DYPY   +G+C+  +  ++ VTI+ ++DVP NDEK+L KA+A+QP+SVAI+  G  FQ Y  G+F GRCG  LDHGV AVGYG+  G+DY IVKNSWG  WG
Sbjct:  136 EAVPKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDTTYNNGCNGGLMDYAFEYIVKNGGLRKEEDYPYSMEEGTCEMQKDESETVTINGHQDVPTNDEKSLLKALAHQPLSVAIDASGREFQFYSGGVFDGRCGVDLDHGVAAVGYGSSKGSDYIIVKNSWGPKWG 325          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 285.419 bits (729), Expect = 1.332e-76
Identity = 137/194 (70.62%), Postives = 160/194 (82.47%), Query Frame = 1
Query:    1 EALPDSVDWRKKGAV-AEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTS-YNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTE--NGADYWIVKNSWGSSWG 570
            EALPDSVDWR KGAV A VK+QG CGSCWAFS +AAVEGINKIVTG L+SLSEQELV+C  +  N GCNGG+MD AF FI  NGG+DTE+DYPY A+DG C+  +++ KVV+ID +EDVP NDE +LQKAVA+QPVSVAI+ GG  FQLY+SG+FTGRCGT+LDHGV AVGYGT+   GA YW V+NSWG  WG
Sbjct:  153 EALPDSVDWRDKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECARNGQNSGCNGGIMDDAFAFIARNGGLDTEEDYPYTAMDGKCNLAKRSRKVVSIDGFEDVPENDELSLQKAVAHQPVSVAIDAGGREFQLYDSGVFTGRCGTNLDHGVVAVGYGTDAATGAAYWTVRNSWGPDWG 346          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 3.876e-76
Identity = 133/191 (69.63%), Postives = 149/191 (78.01%), Query Frame = 1
Query:    1 EALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTE-NGADYWIVKNSWGSSWG 570
            + +P SVDWRKKGAV  VKDQG CGSCWAFSTI AVEGIN+I T  L+SLSEQELVDCDT  N+GCNGGLMDYAFEFI   GGI TE +YPY+A DG+CD  ++NA  V+ID +E+VP NDE AL KAVANQPVSVAI+ GG  FQ Y  G+FTG CGT LDHGV  VGYGT  +G  YW VKNSWG  WG
Sbjct:  124 DTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWG 314          
BLAST of CX287126 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 7.310e-75
Identity = 127/188 (67.55%), Postives = 151/188 (80.32%), Query Frame = 1
Query:    7 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWG 570
            LP SVDWRKKGAVA VKDQG CGSCWAFST+AAVEGIN+I TG+L SLSEQEL+DCDT++N GCNGGLMDYAF++II  GG+  EDDYPY   +G C   +++ + VTI  YEDVP ND+++L KA+A+QPVSVAIE  G  FQ Y+ G+F G+CGT LDHGV AVGYG+  G+DY IVKNSWG  WG
Sbjct:  137 LPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCDTTFNSGCNGGLMDYAFQYIISTGGLHKEDDYPYLMEEGICQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRDFQFYKGGVFNGKCGTDLDHGVAAVGYGSSKGSDYVIVKNSWGPRWG 324          
The following BLAST results are available for this feature:
BLAST of CX287126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 179
Match NameE-valueIdentityDescription
ORYA_ORYSJ4.557e-9384.21Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
RD21A_ARATH1.123e-9180.53Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
CYSPL_SOLLC5.966e-8575.00Low-temperature-induced cysteine proteinase (Fragm... [more]
ORYB_ORYSJ2.267e-8474.87Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
GCP1_ARATH3.619e-8272.34Germination-specific cysteine protease 1 OS=Arabid... [more]
CYSP4_BRANA1.375e-8171.05Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
XCP2_ARATH9.225e-7867.89Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
CYSP1_ORYSJ1.332e-7670.62Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CYSEP_RICCO3.876e-7669.63Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
XCP1_ARATH7.310e-7567.55Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionC01005A03SK Veg1 Citrus clementina cDNA clone C01005A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287126 ID=CX287126; Name=CX287126; organism=Citrus clementina; type=EST; length=570bp
GAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGA
AGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACCATTG
CTGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCACTA
TCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAATGAAGGATGTAA
TGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGATAATGGAGGTA
TTGACACAGAAGATGATTACCCCTACAAAGCCATTGATGGTAGCTGTGAC
ACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGACTATGAAGATGT
TCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTGCAAATCAACCCG
TGAGTGTTGCGATTGAAGGAGGTGGCATGGCATTCCAGTTATATGAATCG
GGTATATTTACGGGAAGATGTGGGACATCTCTGGACCATGGTGTTACTGC
TGTTGGATATGGCACAGAAAATGGAGCTGATTACTGGATTGTGAAGAATT
CATGGGGCAGTAGCTGGGGA
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