CX287140
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287140 vs. ExPASy Swiss-Prot
Match: G3PB_PEA (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2) HSP 1 Score: 310.842 bits (795), Expect = 3.391e-84 Identity = 153/198 (77.27%), Postives = 177/198 (89.39%), Query Frame = 2 Query: 17 MASHSALAPSRIPAITRIPSKTTHSFPTQCSTKRLDVAEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 610 MA+H+ALA +RIP TR PSKT+HSFP+QC++KRL+V EF+GL++ + +Y ARD+SF+D V AQLT K A GS VK TVAKLKVAINGFGRIGRNFLRCWHGRKDSPL+V+VVNDSGGVKNASHLLKYDS+LGTFKA+VKI++NETI+VDGK IKVVS+RDPL+LPWAELGIDIVIEGTGVFVDGPGAGKHIQ Sbjct: 1 MATHAALASTRIPTNTRFPSKTSHSFPSQCASKRLEVGEFSGLKSTSCISYVHSARDSSFYDVVAAQLTSK-ANGSTAVKGVTVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKNASHLLKYDSMLGTFKAEVKILNNETITVDGKPIKVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 197
BLAST of CX287140 vs. ExPASy Swiss-Prot
Match: G3PB_ARATH (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Arabidopsis thaliana GN=GAPB PE=1 SV=2) HSP 1 Score: 306.99 bits (785), Expect = 4.896e-83 Identity = 156/199 (78.39%), Postives = 173/199 (86.93%), Query Frame = 2 Query: 17 MASHSALAPSRIPAITRIPSKTT-HSFPTQCSTKRLDVAEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 610 MA+H+ALA SRIP R+ SK+ HSFP QCS+KRL+VAEF+GLR ++ +ASFFDAV AQ+ PK S PV+ ETVAKLKVAINGFGRIGRNFLRCWHGRKDSPL+VVV+NDSGGVKNASHLLKYDS+LGTFKA+VKIVDNETISVDGKLIKVVSNRDPL+LPWAELGIDIVIEGTGVFVDGPGAGKHIQ Sbjct: 1 MATHAALAVSRIPVTQRLQSKSAIHSFPAQCSSKRLEVAEFSGLRMSSIGG------EASFFDAVAAQIIPKAVTTSTPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVLNDSGGVKNASHLLKYDSMLGTFKAEVKIVDNETISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 193
BLAST of CX287140 vs. ExPASy Swiss-Prot
Match: G3PB_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Spinacia oleracea GN=GAPB PE=1 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 8.352e-83 Identity = 156/200 (78.00%), Postives = 175/200 (87.50%), Query Frame = 2 Query: 17 MASHSALAPSRIPAITRIPSKTT--HSFPTQCSTKRLDVAEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 610 MASH+ALAPSRIPA TR+ SK + +SF TQCS KRLDVA+F+GLR++ T+ R+ASF D + AQLT K G+ PV+ ETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVK+A+HLLKYDS+LGTFKADVKI+DNET S+DGK IKVVSNRDPL+LPWAELGIDIVIEGTGVFVDGPGAGKHIQ Sbjct: 1 MASHAALAPSRIPASTRLASKASQQYSFLTQCSFKRLDVADFSGLRSSNSVTFT---REASFHDVIAAQLTTK-PTGAAPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKSATHLLKYDSILGTFKADVKIIDNETFSIDGKPIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 196
BLAST of CX287140 vs. ExPASy Swiss-Prot
Match: G3PB_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPB PE=2 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 7.087e-74 Identity = 139/169 (82.25%), Postives = 153/169 (90.53%), Query Frame = 2 Query: 104 CSTKRLDVAEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 610 C +K+ +VAEFAGLR++ T++ +++SFFD V+AQLTPK S PVK ETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDS+LGTFKADVKIVDNETISVDGK IKVVS+RDPL+LPWAELGIDIVIEGTGVFVDGPGAGKHIQ Sbjct: 1 CLSKKFEVAEFAGLRSSGCVTFSN--KESSFFDVVSAQLTPKTTR-STPVKGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSMLGTFKADVKIVDNETISVDGKHIKVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 166
BLAST of CX287140 vs. ExPASy Swiss-Prot
Match: G3PA_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Zea mays GN=GAPA PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 3.784e-51 Identity = 105/163 (64.42%), Postives = 121/163 (74.23%), Query Frame = 2 Query: 125 VAEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKD-SPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 610 ++EF+GLR++A A F AV+ + T V P + T AKLKVAINGFGRIGRNFLRCWHGR D SPLDV+ +ND+GGVK ASHLLKYDS LG F ADVK V + ISVDGK+IKVVS+R+P LPW ELGID+VIEGTGVFVD GAGKHIQ Sbjct: 19 LSEFSGLRSSASLPMRRNATSDDFMSAVSFR-THAVGTSGGPRRAPTEAKLKVAINGFGRIGRNFLRCWHGRGDASPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDREGAGKHIQ 180
BLAST of CX287140 vs. ExPASy Swiss-Prot
Match: G3PA_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPA PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.590e-49 Identity = 102/162 (62.96%), Postives = 122/162 (75.31%), Query Frame = 2 Query: 128 AEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETV-AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 610 +EF+GLR ++ + D +V A T + G+ K+ V AKLKVAINGFGRIGRNFLRCWHGRKDSPLDV+ +ND+GGVK ASHLLKYDS LG F ADVK V + ISVDGK+I+VVS+R+P+ LPW +LGID+VIEGTGVFVD GAGKHIQ Sbjct: 12 SEFSGLRTSSAIPFGRKTNDDLL--SVVAFQTSVIGGGNS--KRGVVEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGTDGISVDGKVIQVVSDRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQ 169
BLAST of CX287140 vs. ExPASy Swiss-Prot
Match: G3PA_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Spinacia oleracea GN=GAPA PE=1 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 2.076e-49 Identity = 102/161 (63.35%), Postives = 120/161 (74.53%), Query Frame = 2 Query: 128 AEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 610 +EF+GL ++ G+ D F V+ Q T V AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVV+ND+GGVK ASHLLKYDS+LGTF ADVK + ISVDGK+IKVVS+R+P+ LPW ++GID+VIEGTGVFVD GAGKH+Q Sbjct: 21 SEFSGLHTSSLPFGRKGSDDLMAF--VSFQ-TNAVGGKRSSQNGVVEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQ 178
BLAST of CX287140 vs. ExPASy Swiss-Prot
Match: G3PA_ARATH (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Arabidopsis thaliana GN=GAPA PE=1 SV=3) HSP 1 Score: 194.897 bits (494), Expect = 2.712e-49 Identity = 99/160 (61.88%), Postives = 118/160 (73.75%), Query Frame = 2 Query: 131 EFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 610 EF+GLR+++ + + F ++ + T + + K T AKLKVAINGFGRIGRNFLRCWHGRKDSPLD++ +ND+GGVK ASHLLKYDS LG F ADVK ISVDGK+I+VVSNR+P LPW ELGIDIVIEGTGVFVD GAGKHI+ Sbjct: 14 EFSGLRSSSASLPFGKKLSSDEFVSIVSFQTSAMGSSGGYRKGVTEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTGGVKQASHLLKYDSTLGIFDADVKPSGETAISVDGKIIQVVSNRNPSLLPWKELGIDIVIEGTGVFVDREGAGKHIE 173
BLAST of CX287140 vs. ExPASy Swiss-Prot
Match: G3PA_PEA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Pisum sativum GN=GAPA PE=2 SV=2) HSP 1 Score: 190.66 bits (483), Expect = 5.114e-48 Identity = 100/161 (62.11%), Postives = 116/161 (72.05%), Query Frame = 2 Query: 128 AEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAK-LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHI 607 +EF+GLR ++ + F VT Q ++G AK LKVAINGFGRIGRNFLRCWHGRKDSPLDV+ +ND+GGVK ASHLLKYDS LG F ADVK V + ISVDGK+IKVVS+R+P LPW ELGID+VIEGTGVFVD GAG+HI Sbjct: 21 SEFSGLRNSSRHLPFSRKSSDDFHSLVTFQTNAVGSSGGHKKSLVVEAKQLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGTDGISVDGKVIKVVSDRNPANLPWKELGIDLVIEGTGVFVDREGAGRHI 181
BLAST of CX287140 vs. ExPASy Swiss-Prot
Match: G3PA_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Chlamydomonas reinhardtii GN=GAPA PE=1 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 5.114e-48 Identity = 94/128 (73.44%), Postives = 107/128 (83.59%), Query Frame = 2 Query: 227 KVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 610 K A V V+ E K++VAINGFGRIGRNFLRCWHGR+++ LDVV +NDSGGVK ASHLLKYDS LGTF ADVKIVD+ ISVDGK IK+VS+RDPLQLPW E+ ID+VIEGTGVF+D GAGKHIQ Sbjct: 24 KAARAVVDVRAEK--KIRVAINGFGRIGRNFLRCWHGRQNTLLDVVAINDSGGVKQASHLLKYDSTLGTFAADVKIVDDSHISVDGKQIKIVSSRDPLQLPWKEMNIDLVIEGTGVFIDKVGAGKHIQ 149 The following BLAST results are available for this feature:
BLAST of CX287140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287140 ID=CX287140; Name=CX287140; organism=Citrus clementina; type=EST; length=612bpback to top |