CX287144

Overview
NameCX287144
Unique NameCX287144
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11517 contig Ccv1_Contig11517:445..1121. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287144 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 396.356 bits (1017), Expect = 7.409e-110
Identity = 184/222 (82.88%), Postives = 204/222 (91.89%), Query Frame = 3
Query:   12 RLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 677
            +L LN+FAD +W+EFQR++LGAAQNCSAT KG+HK+T   +P+TKDWRE GIVSPVK+QGHCGSCWTFSTTG+LEAAYHQAFGKGISLSEQQLVDCA  FNN GC+GGLPSQAFEYIKYNGGLDTEEAYPYTGKDG CKFS++N+GVQV DSVNITLGAEDEL+HAVGLVRPVSVAFEVV  FRFYK GV++S  CGNTPMDVNHAV+AVGYGVED VPYWL
Sbjct:  101 KLSLNQFADLTWQEFQRYKLGAAQNCSATLKGSHKITEATVPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGGCKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVRPVSVAFEVVHEFRFYKKGVFTSNTCGNTPMDVNHAVLAVGYGVEDDVPYWL 322          
BLAST of CX287144 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 395.586 bits (1015), Expect = 1.264e-109
Identity = 185/222 (83.33%), Postives = 204/222 (91.89%), Query Frame = 3
Query:   12 RLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 677
            +LG+N+FAD +W+EFQR +LGAAQNCSAT KG+HK+T   LPETKDWRE GIVSPVKDQG CGSCWTFSTTG+LEAAYHQAFGKGISLSEQQLVDCA AFNN GCNGGLPSQAFEYIK NGGLDTE+AYPYTGKD  CKFS+ENVGVQVL+SVNITLGAEDEL+HAVGLVRPVS+AFEV+  FR YKSGVY+ + CG+TPMDVNHAV+AVGYGVEDGVPYWL
Sbjct:  101 KLGVNQFADLTWQEFQRTKLGAAQNCSATLKGSHKVTEAALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGLDTEKAYPYTGKDETCKFSAENVGVQVLNSVNITLGAEDELKHAVGLVRPVSIAFEVIHSFRLYKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDGVPYWL 322          
BLAST of CX287144 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 4.207e-105
Identity = 178/222 (80.18%), Postives = 203/222 (91.44%), Query Frame = 3
Query:   12 RLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 677
            +LG+N+F D +W+EF++H+LGA+QNCSATTKGN KLT  VLPETKDWR+ GIVSPVK QG CGSCWTFSTTG+LEAAY QAFGKGISLSEQQLVDCA AFNN GCNGGLPSQAFEYIK+NGGLDTEEAYPYTGK+G+CKFS  N+GV+V+ SVNITLGAE EL++AV LVRPVSVAFEVV GF+ YKSGVY+ST+CG+TPMDVNHAV+AVGYGVE+G PYWL
Sbjct:   99 KLGINEFTDLTWDEFRKHKLGASQNCSATTKGNLKLTNVVLPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTGKNGICKFSQANIGVKVISSVNITLGAEYELKYAVALVRPVSVAFEVVKGFKQYKSGVYASTECGDTPMDVNHAVLAVGYGVENGTPYWL 320          
BLAST of CX287144 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 380.178 bits (975), Expect = 5.494e-105
Identity = 180/223 (80.72%), Postives = 200/223 (89.69%), Query Frame = 3
Query:   12 RLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLT-ADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 677
            RLG+N+FAD SWEEFQ  RLGAAQNCSAT  GNH++  A  LPETKDWRE GIVSPVKDQGHCGSCWTFSTTGSLEAAY QA GK +SLSEQQLVDCA A+NN GC+GGLPSQAFEYIKYNGGLDTEEAYPYTG +G+C +  ENVGV+VLDSVNITLGAEDEL++AVGLVRPVSVAF+V++GFR YKSGVY+S  CG +PMDVNHAV+AVGYGVE+GVPYWL
Sbjct:  104 RLGINRFADMSWEEFQASRLGAAQNCSATLAGNHRMRDAAALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNGICHYKPENVGVKVLDSVNITLGAEDELKNAVGLVRPVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVENGVPYWL 326          
BLAST of CX287144 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 379.793 bits (974), Expect = 7.176e-105
Identity = 182/224 (81.25%), Postives = 198/224 (88.39%), Query Frame = 3
Query:   12 RLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV--LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 677
            RLG+N+FAD SWEEF+  RLGAAQNCSAT  GNH++ A    LPETKDWRE GIVSPVK+QGHCGSCWTFSTTG+LEAAY QA GK ISLSEQQLVDC  AFNN GCNGGLPSQAFEYIKYNGGLDTEE+YPY G +G+CKF +ENVGV+VLDSVNITLGAEDEL+ AVGLVRPVSVAFEV+ GFR YKSGVY+S  CG TPMDVNHAV+AVGYGVEDGVPYWL
Sbjct:  101 RLGINRFADMSWEEFRATRLGAAQNCSATLTGNHRMRAAAVALPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAFNNFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVNGICKFKNENVGVKVLDSVNITLGAEDELKDAVGLVRPVSVAFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVPYWL 324          
BLAST of CX287144 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 363.229 bits (931), Expect = 6.951e-100
Identity = 174/223 (78.03%), Postives = 192/223 (86.10%), Query Frame = 3
Query:   12 RLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLT-ADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 677
            RLG+N+F+D SWEEFQ  RLGAAQ CSAT  GNH +  A  LPETKDWRE GIVSPVK+Q HCGSCWTFSTTG+LEAAY QA GK ISLSEQQLVDCA  FNN GCNGGLPSQAFEYIKYNGG+DTEE+YPY G +GVC + +EN  VQVLDSVNITL AEDEL++AVGLVRPVSVAF+V+DGFR YKSGVY+S  CG TP DVNHAV+AVGYGVE+GVPYWL
Sbjct:  103 RLGINRFSDMSWEEFQATRLGAAQTCSATLAGNHLMRDAAALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVNGVCHYKAENAAVQVLDSVNITLNAEDELKNAVGLVRPVSVAFQVIDGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVENGVPYWL 325          
BLAST of CX287144 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 5.939e-67
Identity = 127/224 (56.70%), Postives = 157/224 (70.09%), Query Frame = 3
Query:   12 RLGLNKFADWSWEEFQRHRLGAA-QNCSATTKGNHKLTADVLPETKDWRESG-IVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 677
            +LGLN+F+D S++E +   L +  QNCSAT KGN+       P + DWR+ G  VSPVK+QG CGSCWTFSTTG+LE+A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQAFEYI+YN G+  E+ YPY G+D  CKF  +     V D  NIT+  E+ +  AV L  PVS AFEV + F  Y+ G+YSST C  TP  VNHAV+AVGYG E+G+PYW+
Sbjct:   76 KLGLNQFSDMSFDEIRHKYLWSEPQNCSAT-KGNYLRGTGPYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQDDHCKFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENGIPYWI 298          
BLAST of CX287144 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 4.256e-65
Identity = 127/224 (56.70%), Postives = 157/224 (70.09%), Query Frame = 3
Query:   12 RLGLNKFADWSWEEFQRHRLGAA-QNCSATTKGNHKLTADVLPETKDWRESG-IVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 677
            ++GLN+F+D S+ E +   L +  QNCSAT K N+       P + DWR+ G +VSPVK+QG CGSCWTFSTTG+LE+A   A GK ++L+EQQLVDCAQ FNN GC GGLPSQAFEYI YN G+  E++YPY GK+G CKF+ E     V + VNITL  E  +  AV L  PVS AFEV + F  YKSGVYSS  C  TP  VNHAV+AVGYG ++G+ YW+
Sbjct:   74 KMGLNQFSDMSFAEIKHKYLWSEPQNCSAT-KSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLLYWI 296          
BLAST of CX287144 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.238e-64
Identity = 125/224 (55.80%), Postives = 153/224 (68.30%), Query Frame = 3
Query:   12 RLGLNKFADWSWEEFQRHRLGAA-QNCSATTKGNHKLTADVLPETKDWRESG-IVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 677
            ++GLN+F+D S++E +R  L +  QNCSAT K N+       P + DWR+ G  V+PVK+QG CGSCWTFSTTG+LE+A   A GK   L+EQQLVDCAQ FNN GC GGLPSQAFEYI+YN G+  E+ YPY G+DG CK+        V D  NITL  E+ +  AV L  PVS AFEV   F  Y+ G+YSST C  TP  VNHAV+AVGYG E G+PYW+
Sbjct:   76 KMGLNQFSDMSFDELKRKYLWSEPQNCSAT-KSNYLRGTGPYPPSMDWRKKGNFVTPVKNQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYRGQDGDCKYQPSKAIAFVKDVANITLNDEEAMVEAVALHNPVSFAFEVTADFMMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEEKGIPYWI 298          
BLAST of CX287144 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 244.973 bits (624), Expect = 2.759e-64
Identity = 125/224 (55.80%), Postives = 153/224 (68.30%), Query Frame = 3
Query:   12 RLGLNKFADWSWEEFQRHRLGAA-QNCSATTKGNHKLTADVLPETKDWRESG-IVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWL 677
            ++ LN+F+D S+ E +   L +  QNCSAT K N+       P + DWR+ G  VSPVK+QG CGSCWTFSTTG+LE+A   A GK +SL+EQQLVDCAQ FNN GC GGLPSQAFEYI YN G+  E+ YPY GKDG CKF        V D  NIT+  E+ +  AV L  PVS AFEV   F  Y++G+YSST C  TP  VNHAV+AVGYG ++G+PYW+
Sbjct:   76 KMALNQFSDMSFAEIKHKYLWSEPQNCSAT-KSNYLRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWI 298          
The following BLAST results are available for this feature:
BLAST of CX287144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 166
Match NameE-valueIdentityDescription
ALEUL_ARATH7.409e-11082.88Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
ALEU_ARATH1.264e-10983.33Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
CYSP3_SOLLC4.207e-10580.18Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
ORYC_ORYSJ5.494e-10580.72Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CYSP2_MAIZE7.176e-10581.25Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
ALEU_HORVU6.951e-10078.03Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CATH_PIG5.939e-6756.70Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CATH_RAT4.256e-6556.70Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CATH_BOVIN1.238e-6455.80Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
CATH_HUMAN2.759e-6455.80Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]

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Properties
Property NameValue
Genbank descriptionC01005B10SK Veg1 Citrus clementina cDNA clone C01005B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287144 ID=CX287144; Name=CX287144; organism=Citrus clementina; type=EST; length=677bp
CGGCACGAGGCAGGCTCGGGTTGAACAAGTTTGCTGACTGGAGCTGGGAA
GAGTTCCAAAGGCACAGGTTGGGAGCTGCGCAAAACTGCTCTGCCACTAC
AAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGACT
GGAGGGAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGTCACTGTGGA
TCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACCACCA
GGCCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGTAGACTGTG
CCCAAGCTTTCAACAACCAGGGATGCAATGGTGGGTTGCCATCCCAAGCC
TTTGAATACATCAAGTACAATGGTGGCCTTGATACTGAGGAAGCATATCC
CTACACCGGAAAAGATGGTGTCTGCAAATTCTCATCTGAAAATGTTGGCG
TCCAAGTCCTGGACTCAGTCAACATTACCTTGGGTGCTGAAGATGAATTA
CAGCATGCAGTTGGTCTTGTTCGACCTGTGAGTGTGGCATTTGAAGTAGT
AGATGGATTCCGATTTTACAAGAGTGGAGTTTACAGCAGCACTAAATGTG
GAAATACTCCCATGGATGTGAACCATGCCGTCGTTGCTGTTGGGTACGGA
GTTGAAGATGGTGTTCCATATTGGCTG
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