CX287147

Overview
NameCX287147
Unique NameCX287147
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15493 contig Ccv1_Contig15493:377..1086. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287147 vs. ExPASy Swiss-Prot
Match: GALK1_ARATH (Galactokinase OS=Arabidopsis thaliana GN=GAL1 PE=2 SV=2)

HSP 1 Score: 393.275 bits (1009), Expect = 6.888e-109
Identity = 188/234 (80.34%), Postives = 216/234 (92.31%), Query Frame = 3
Query:    9 TYPAEPDQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNPIRATDVQLPAGGTFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQEAISKVKTLSDVEGLCVAFAGKNGSDDPFLAVKEFLHEEPYMAKDIEKIIEEKL 710
            TYPA+PDQE+DLK+H+WGHYFIC YKGF+EY K+KG+++G PVGLD+LVDGIVPTGSGLSSSAAFVCS+TIA+MA FG    KKE+AQLTCECER+IG QSGGMDQAISIMAK+GFAELIDFNP+RATDV+LP GG+FVIAHSLAES KAVTAA NYNNRVVECRLA+I+LG+KLGM+P+EAISKVKTLSDVEGLCV+FAG  GS DP LAVKE+L EEPY A++IEKI+EEKL
Sbjct:  106 TYPADPDQEIDLKNHKWGHYFICAYKGFHEYAKSKGVNLGSPVGLDVLVDGIVPTGSGLSSSAAFVCSATIAIMAVFGHNFEKKELAQLTCECERHIGTQSGGMDQAISIMAKTGFAELIDFNPVRATDVKLPDGGSFVIAHSLAESQKAVTAAKNYNNRVVECRLASIILGVKLGMEPKEAISKVKTLSDVEGLCVSFAGDRGSSDPLLAVKEYLKEEPYTAEEIEKILEEKL 339          
BLAST of CX287147 vs. ExPASy Swiss-Prot
Match: GALK_DICDI (Galactokinase OS=Dictyostelium discoideum GN=galK PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.674e-38
Identity = 87/188 (46.28%), Postives = 128/188 (68.09%), Query Frame = 3
Query:   27 DQELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNP-IRATDVQLPAGGTFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQEAISKVKTLSDVE 587
            D E+D+K H W +Y +  +KG  + ++ KG   G    +++L  G VP G+G+SSS+A VC ST+A+     + + K+E+AQL+ + ERY+G +SGGMDQ+IS +A+   A+LI+F+P ++  DVQLP G +FVI +SL +SLK VT ATNYN RVVECRLAA++L    G+    +  KV+ L DV+
Sbjct:  113 DIEIDMKRHHWTNYVLAAWKGVSQAME-KG---GKLKSVNLLYSGNVPMGAGVSSSSALVCVSTLAISYCNNLILNKEELAQLSIKSERYVGVESGGMDQSISFLAEQNTAKLIEFHPSLKTFDVQLPKGVSFVICNSLVDSLKVVTGATNYNLRVVECRLAAVLLAFHCGL----SWEKVRRLRDVQ 292          
BLAST of CX287147 vs. ExPASy Swiss-Prot
Match: GALK2_RAT (N-acetylgalactosamine kinase OS=Rattus norvegicus GN=Galk2 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.729e-38
Identity = 89/221 (40.27%), Postives = 138/221 (62.44%), Query Frame = 3
Query:   36 LDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNPIRATDVQLPAGGTFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQEAISKVKTLSDVEGLCVAFAGKNGSDDPFLAVKEFLHEEPYMAKDIEKII 698
            +D     W +YF+CG+KG  E+    GL   P  G++ LVDG +P  SGLSSS+A VC + +  +   G+ + K E+A++  + ERYIG + GGMDQ+IS +A+ G A+LI+F+P+RATDV+LP+G  FVIA+S  E  KA T  +++N RV+ECRLAA VL    G++  + +   +  S++ G+ +        ++  L  ++ LH EPY  ++I K +
Sbjct:  100 IDKTQPLWHNYFLCGFKGIQEHF---GLTQLP--GMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGMRLSKVELAEICAKSERYIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAAT--SHFNVRVMECRLAAKVLAKHKGLQWDKVLRLEEVQSEL-GISL--------EEMLLVTEDALHAEPYSREEICKCL 304          
BLAST of CX287147 vs. ExPASy Swiss-Prot
Match: GALK2_MOUSE (N-acetylgalactosamine kinase OS=Mus musculus GN=Galk2 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.385e-37
Identity = 85/210 (40.48%), Postives = 134/210 (63.81%), Query Frame = 3
Query:   57 WGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNPIRATDVQLPAGGTFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQEAISKVKTLSDVEGLCVAFAGKNGSDDPFLAVKEFLHEEPYMAKDI 686
            W +YF+CG+KG  E+    GL   P  G++ LVDG +P  SGLSSS+A VC + +  +   G+ + K E+A++  + ERYIG + GGMDQ+IS +A+ G A+LI+F+P+RAT+V+LP+G  FVIA+S  E  KA T  +++N RV+ECRLAA VL    G++  + + +++ +    G+ +        ++  L  ++ LH EPY  ++I
Sbjct:  107 WHNYFLCGFKGIQEHF---GLSKLP--GMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGLRLSKVELAEICAKSERYIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATNVKLPSGAVFVIANSCMEMNKAAT--SHFNVRVMECRLAAKVLAKHKGLQ-WDNVLRLEEVQSKLGISL--------EEMLLVTEDALHPEPYSREEI 300          
BLAST of CX287147 vs. ExPASy Swiss-Prot
Match: GALK2_PONAB (N-acetylgalactosamine kinase OS=Pongo abelii GN=GALK2 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.559e-36
Identity = 84/218 (38.53%), Postives = 131/218 (60.09%), Query Frame = 3
Query:   33 ELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNPIRATDVQLPAGGTFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQEAISKVKTLSDVEGLCVAFAGKNGSDDPFLAVKEFLHEEPYMAKDI 686
            ++D     W +YF+CG KG  E+     L      G++ LVDG +P  SGLSSS+A VC + +  +   G  + K E+A++  + ERYIG + GGMDQ+IS +A+ G A+LI+F+P+RATDV+LP+G  FVIA+S  E  KA T  +++N RV+ECRLAA +L  K      + + +++ +    G+ +        ++  L  ++ LH EPY  ++I
Sbjct:   99 QIDKTKPLWHNYFLCGLKGIQEHFGVSNL-----TGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAEICAKSERYIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAAT--SHFNIRVMECRLAAKLLA-KYKSLQWDKVLRLEEVQAKLGISL--------EEMLLVTEDALHPEPYNPEEI 300          
BLAST of CX287147 vs. ExPASy Swiss-Prot
Match: GALK2_HUMAN (N-acetylgalactosamine kinase OS=Homo sapiens GN=GALK2 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.954e-36
Identity = 84/218 (38.53%), Postives = 131/218 (60.09%), Query Frame = 3
Query:   33 ELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVEVPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNPIRATDVQLPAGGTFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQEAISKVKTLSDVEGLCVAFAGKNGSDDPFLAVKEFLHEEPYMAKDI 686
            ++D     W +YF+CG KG  E+     L      G++ LVDG +P  SGLSSS+A VC + +  +   G  + K E+A++  + ERYIG + GGMDQ+IS +A+ G A+LI+F+P+RATDV+LP+G  FVIA+S  E  KA T  +++N RV+ECRLAA +L  K      + + +++ +    G+ +        ++  L  ++ LH EPY  ++I
Sbjct:   99 QIDKTKPLWHNYFLCGLKGIQEHFGLSNL-----TGMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAEICAKSERYIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAAT--SHFNIRVMECRLAAKLLA-KYKSLQWDKVLRLEEVQAKLGISL--------EEMLLVTEDALHPEPYNPEEI 300          
BLAST of CX287147 vs. ExPASy Swiss-Prot
Match: GAL1_CANPA (Galactokinase OS=Candida parapsilosis GN=GAL1 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.268e-27
Identity = 79/203 (38.92%), Postives = 117/203 (57.64%), Query Frame = 3
Query:   36 LDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVE-VPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNP-IRATDVQLPAGG-TFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQEAI---SKVKTLS---DVEGLCVAFAGKN 617
            +D +HH W +YF CG     ++++ K +      G++I   G VPTG GLSSSAAF  +ST+A++ A GVE + K ++ ++T   E Y+G  +GGMDQ  S+  + G A  I F P ++ T  + P    TFVI +SL  S K  TA  +YN RVVE  +A  +L  KL ++ +E I   S V T S    ++G C A+ G++
Sbjct:  106 IDREHHTWANYFKCGLIVASKFLQEKAMT--KLKGMNITFSGTVPTGGGLSSSAAFCVASTLAVLYANGVEDISKADLTRITVVSEHYLGLNNGGMDQCASVYGEQGKALFIQFKPQLKGTPFEFPVKNLTFVITNSLQVSNKYETAPIHYNLRVVEMAIAGDLLAKKLNVEGKEGIVKDSNVDTYSLRGVMDGYCGAWDGED 306          
BLAST of CX287147 vs. ExPASy Swiss-Prot
Match: GAL1_CANAL (Galactokinase OS=Candida albicans GN=GAL1 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.295e-26
Identity = 72/172 (41.86%), Postives = 99/172 (57.56%), Query Frame = 3
Query:   33 ELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGV-EVPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNP-IRATDVQLPAGG-TFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGM 539
            E+D +HH W +YF C       Y+  + L  G   G+ +  DG VPTG GLSSSAAF  +ST+A++ A GV ++ K ++ ++T  CE Y+G  +GGMDQ  S+  +   A LI F P +     + P    TFVI +SL  S K  TA  +YN RVVE  +AA VL  KL +
Sbjct:  109 EIDSQHHSWANYFKCALIVANNYLTEQNLK-GQLKGMKLTFDGNVPTGGGLSSSAAFCVASTLAILHANGVKDITKADLTRITVVCEHYVGVNTGGMDQCASVYGEPDKALLIQFKPKLIGKPFKFPVENLTFVITNSLQVSNKHETAPIHYNLRVVEMAIAADVLVKKLNL 279          
BLAST of CX287147 vs. ExPASy Swiss-Prot
Match: GAL1_SCHPO (Galactokinase OS=Schizosaccharomyces pombe GN=gal1 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.772e-25
Identity = 71/193 (36.79%), Postives = 111/193 (57.51%), Query Frame = 3
Query:   33 ELDLKHHQWGHYFICGYKGFYEYVKAKGLDV-----GPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALMAAFGVE-VPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNP-IRATDVQLPA----GGTFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMK-PQEAISKVKTL 575
            E++  HH WG+YF C     ++Y+  K  ++      P  GL ++ DG VPTG GLSSSAAF  +S +A++ A G+  + K+++ +++   E Y+G  +GGMDQ  SI  +   A L+ F P + AT  ++P        F+I+++L E+ K  TA TNYN RVVE  +A+  L  K  ++ P+E+     TL
Sbjct:  107 EINKTHHTWGNYFRCSMIVAHKYILEKYPELVSGGKKPLKGLKLIFDGNVPTGGGLSSSAAFCVASILAILKANGINTITKEDLVKISVVSEHYVGVNTGGMDQCASIYGEQNKALLVQFKPKLMATPFKMPVLKPHDMVFLISNTLVEANKQETALTNYNLRVVEMAVASEFLAKKFNLELPKESNLHTGTL 299          
BLAST of CX287147 vs. ExPASy Swiss-Prot
Match: GAL1_KLULA (Galactokinase OS=Kluyveromyces lactis GN=GAL1 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.772e-25
Identity = 69/178 (38.76%), Postives = 102/178 (57.30%), Query Frame = 3
Query:   33 ELDLKHHQWGHYFICGYKGFYEYVKAKGLDVGPPVGLDILVDGIVPTGSGLSSSAAFVCSSTIALM---AAFGVEVPKKEIAQLTCECERYIGAQSGGMDQAISIMAKSGFAELIDFNP-IRATDVQLPAG--GTFVIAHSLAESLKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQ 548
            E+D     W +YF CG     ++++ K    GP  G++I V G +P+G GLSSSAAF+C+ ++A++      G  + K E+ + T   E ++G  +GGMDQA SI    G A  ++F P ++AT  + P     +F+IA++L  S KA T   NYN RVVE  +AA VL  K G+  Q
Sbjct:  106 EIDPSVSDWSNYFKCGLLVAQQFLQEKYNFKGPVHGMEIYVKGDIPSGGGLSSSAAFICAVSLAIIYSNVPAGTPILKDELTKTTAVAEHHVGVNNGGMDQAASICGIEGHALYVEFKPELKATPFKFPEDLPISFLIANTLVVSNKAETGPVNYNLRVVEVTVAANVLAQKFGVTLQ 283          
The following BLAST results are available for this feature:
BLAST of CX287147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
GALK1_ARATH6.888e-10980.34Galactokinase OS=Arabidopsis thaliana GN=GAL1 PE=2... [more]
GALK_DICDI1.674e-3846.28Galactokinase OS=Dictyostelium discoideum GN=galK ... [more]
GALK2_RAT3.729e-3840.27N-acetylgalactosamine kinase OS=Rattus norvegicus ... [more]
GALK2_MOUSE5.385e-3740.48N-acetylgalactosamine kinase OS=Mus musculus GN=Ga... [more]
GALK2_PONAB4.559e-3638.53N-acetylgalactosamine kinase OS=Pongo abelii GN=GA... [more]
GALK2_HUMAN5.954e-3638.53N-acetylgalactosamine kinase OS=Homo sapiens GN=GA... [more]
GAL1_CANPA2.268e-2738.92Galactokinase OS=Candida parapsilosis GN=GAL1 PE=3... [more]
GAL1_CANAL7.295e-2641.86Galactokinase OS=Candida albicans GN=GAL1 PE=3 SV=... [more]
GAL1_SCHPO2.772e-2536.79Galactokinase OS=Schizosaccharomyces pombe GN=gal1... [more]
GAL1_KLULA2.772e-2538.76Galactokinase OS=Kluyveromyces lactis GN=GAL1 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionC01005C01SK Veg1 Citrus clementina cDNA clone C01005C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287147 ID=CX287147; Name=CX287147; organism=Citrus clementina; type=EST; length=710bp
CACGAGGTACTTATCCTGCTGAACCTGATCAGGAACTTGACTTGAAGCAT
CATCAATGGGGCCATTATTTCATTTGTGGATATAAAGGTTTTTATGAATA
TGTGAAAGCTAAAGGATTGGATGTTGGTCCACCAGTTGGACTTGATATTC
TTGTTGATGGAATAGTTCCAACAGGTTCTGGGCTATCCAGCTCTGCAGCA
TTTGTTTGCTCTTCGACCATTGCTCTTATGGCTGCTTTTGGTGTGGAAGT
CCCAAAGAAAGAAATTGCGCAACTTACATGTGAATGCGAACGATATATTG
GAGCGCAGTCTGGTGGAATGGACCAGGCAATCTCTATCATGGCCAAATCT
GGGTTTGCAGAACTGATTGATTTCAATCCCATTCGTGCAACTGATGTGCA
ACTTCCTGCTGGCGGAACTTTTGTGATAGCCCATTCTTTGGCGGAATCTC
TGAAGGCAGTTACTGCTGCTACAAATTACAATAACAGAGTTGTTGAATGT
CGACTGGCTGCTATTGTACTGGGTATAAAGCTTGGAATGAAACCACAAGA
GGCGATATCTAAAGTCAAAACTCTTTCTGATGTTGAAGGGTTGTGTGTAG
CATTTGCTGGGAAAAATGGTTCTGATGATCCTTTCCTTGCAGTTAAGGAA
TTTTTGCACGAGGAACCATATATGGCTAAAGACATCGAGAAAATCATAGA
GGAAAAGCTA
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