CX287151

Overview
NameCX287151
Unique NameCX287151
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287151 vs. ExPASy Swiss-Prot
Match: PLCD2_ARATH (Phosphoinositide phospholipase C 2 OS=Arabidopsis thaliana GN=PLC2 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.141e-23
Identity = 50/63 (79.37%), Postives = 57/63 (90.48%), Query Frame = 1
Query:  160 SVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDHKGERYKSVKLLMRFEFI 348
            +VPELALLR+EVHEYDMSEKDDFGGQTCLPV EL +GIRA PLH  KGE+YKSVKLL++ EF+
Sbjct:  519 TVPELALLRLEVHEYDMSEKDDFGGQTCLPVWELSEGIRAFPLHSRKGEKYKSVKLLVKVEFV 581          
BLAST of CX287151 vs. ExPASy Swiss-Prot
Match: PLCD4_ARATH (Phosphoinositide phospholipase C 4 OS=Arabidopsis thaliana GN=PLC4 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 3.473e-22
Identity = 47/63 (74.60%), Postives = 58/63 (92.06%), Query Frame = 1
Query:  160 SVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDHKGERYKSVKLLMRFEFI 348
            +VPELALLR+EVHE+D++EKDDFGGQTCLPVSE++QGIRAVPL + KG +Y S +LLMRFEF+
Sbjct:  535 AVPELALLRVEVHEHDVNEKDDFGGQTCLPVSEIRQGIRAVPLFNRKGVKYSSTRLLMRFEFV 597          
BLAST of CX287151 vs. ExPASy Swiss-Prot
Match: PLCD6_ARATH (Phosphoinositide phospholipase C 6 OS=Arabidopsis thaliana GN=PLC6 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 4.535e-22
Identity = 50/62 (80.65%), Postives = 57/62 (91.94%), Query Frame = 1
Query:  160 SVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDHKGERYKSVKLLMRFEF 345
            +VPELALLRIEV EYDMSEKDDFGGQTCLPV+EL+ GIR+VPL+D KGE+ KSV+LLMRF F
Sbjct:  551 TVPELALLRIEVREYDMSEKDDFGGQTCLPVAELRPGIRSVPLYDKKGEKMKSVRLLMRFIF 612          
BLAST of CX287151 vs. ExPASy Swiss-Prot
Match: PLCD5_ARATH (Phosphoinositide phospholipase C 5 OS=Arabidopsis thaliana GN=PLC5 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.010e-21
Identity = 49/63 (77.78%), Postives = 56/63 (88.89%), Query Frame = 1
Query:  160 SVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDHKGERYKSVKLLMRFEFI 348
            +VPELALLRIEVH+Y+M EKDDF GQTCLPVSEL+QGIR+VPL+D KGER  SV LLMRF F+
Sbjct:  516 TVPELALLRIEVHDYNMPEKDDFSGQTCLPVSELRQGIRSVPLYDRKGERLVSVTLLMRFHFL 578          
BLAST of CX287151 vs. ExPASy Swiss-Prot
Match: PLCD7_ARATH (Phosphoinositide phospholipase C 7 OS=Arabidopsis thaliana GN=PLC7 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.117e-20
Identity = 48/63 (76.19%), Postives = 55/63 (87.30%), Query Frame = 1
Query:  160 SVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDHKGERYKSVKLLMRFEFI 348
            +VPELALLRIEVHEYDMSEKDDFGGQ CLPV EL+QGIRAVPL +  G + +SVKLL+R EF+
Sbjct:  522 TVPELALLRIEVHEYDMSEKDDFGGQICLPVWELRQGIRAVPLRNQDGVKCRSVKLLVRLEFV 584          
BLAST of CX287151 vs. ExPASy Swiss-Prot
Match: PLCD1_ARATH (Phosphoinositide phospholipase C 1 OS=Arabidopsis thaliana GN=PLC1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.546e-14
Identity = 37/59 (62.71%), Postives = 46/59 (77.97%), Query Frame = 1
Query:  163 VPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDHKGERYKSVKLLMRF 339
            VPEL+LL I V +YD + ++DF GQTC P+SE++ GIRAV LHD  GE YK V+LLMRF
Sbjct:  498 VPELSLLCITVKDYDSNTQNDFAGQTCFPLSEVRPGIRAVRLHDRAGEVYKHVRLLMRF 556          
BLAST of CX287151 vs. ExPASy Swiss-Prot
Match: PLCD3_ARATH (Phosphoinositide phospholipase C 3 OS=Arabidopsis thaliana GN=PLC3 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.727e-13
Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 1
Query:  160 SVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDHKGERYKSVKLLMRF 339
            SVPELALL  +V +YD   ++DF GQTCLP+ ELK G+RAV LHD  G+ YK+ +LL+ F
Sbjct:  496 SVPELALLWFKVQDYDNDTQNDFAGQTCLPLPELKSGVRAVRLHDRTGKAYKNTRLLVSF 555          
BLAST of CX287151 vs. ExPASy Swiss-Prot
Match: PLCD8_ARATH (Phosphoinositide phospholipase C 8 OS=Arabidopsis thaliana GN=PLC8 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.910e-12
Identity = 34/60 (56.67%), Postives = 46/60 (76.67%), Query Frame = 1
Query:  166 PELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDHKGERYKSVKLLMRFEF 345
            P+LAL+  EV++Y++S  D F GQTCLPVSEL +GIRAVPL+D +G+   S  LL RF++
Sbjct:  471 PDLALISFEVYDYEVSTADAFCGQTCLPVSELIEGIRAVPLYDERGKACSSTMLLTRFKW 530          
BLAST of CX287151 vs. ExPASy Swiss-Prot
Match: PLCD9_ARATH (Phosphoinositide phospholipase C 9 OS=Arabidopsis thaliana GN=PLC9 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.494e-12
Identity = 34/60 (56.67%), Postives = 46/60 (76.67%), Query Frame = 1
Query:  166 PELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDHKGERYKSVKLLMRFEF 345
            P+LAL+  EV++Y++S  D F GQTCLPVSEL +GIRAVPL+D +G+   S  LL RF++
Sbjct:  471 PDLALISFEVYDYEVSTPDYFCGQTCLPVSELIEGIRAVPLYDERGKACSSTMLLTRFKW 530          
The following BLAST results are available for this feature:
BLAST of CX287151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
PLCD2_ARATH3.141e-2379.37Phosphoinositide phospholipase C 2 OS=Arabidopsis ... [more]
PLCD4_ARATH3.473e-2274.60Phosphoinositide phospholipase C 4 OS=Arabidopsis ... [more]
PLCD6_ARATH4.535e-2280.65Phosphoinositide phospholipase C 6 OS=Arabidopsis ... [more]
PLCD5_ARATH1.010e-2177.78Phosphoinositide phospholipase C 5 OS=Arabidopsis ... [more]
PLCD7_ARATH1.117e-2076.19Phosphoinositide phospholipase C 7 OS=Arabidopsis ... [more]
PLCD1_ARATH4.546e-1462.71Phosphoinositide phospholipase C 1 OS=Arabidopsis ... [more]
PLCD3_ARATH1.727e-1358.33Phosphoinositide phospholipase C 3 OS=Arabidopsis ... [more]
PLCD8_ARATH1.910e-1256.67Phosphoinositide phospholipase C 8 OS=Arabidopsis ... [more]
PLCD9_ARATH2.494e-1256.67Phosphoinositide phospholipase C 9 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionC01005C05SK Veg1 Citrus clementina cDNA clone C01005C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287151 ID=CX287151; Name=CX287151; organism=Citrus clementina; type=EST; length=683bp
GTCACTCAAACGTTGGGAGAAATCCTGTTTACCCCTGGCTCAGAATGCTT
AAAGGAATTCCCCTCCCCGGAATCACTGAAGAGACGGATCATCATTTCAA
CCAAACCGCCAAAGGAATACCTTGAGGCCAAAGAAGAAAAGGAATTTGAG
TTCCCGCTCTCTGTTCCAGAACTTGCTCTGCTACGAATTGAAGTTCATGA
GTACGACATGTCTGAAAAGGATGACTTTGGAGGTCAAACATGCTTACCTG
TTTCTGAACTAAAACAAGGGATTCGTGCAGTTCCACTCCATGACCACAAA
GGAGAGAGATACAAGTCTGTAAAGCTTCTTATGCGCTTCGAATTCATTTA
AGGCCATTATCACTTCCAGGCTGTGTTCTCTCGGAGAGATGTATAAATTT
GTGAAGGCTATTTGATTTTGTTTTTGTTTGTGTGAGCTTGAGTGTAGTTG
TGTTGATATGTTTTGTCGTGTGGTGTGATACATAATACCACTGCTTCCGT
TGGTGTAATATATCCAGTGTGAGAATCTAATACTTCTCTTCAGTTGCAAG
TAGCAACCGTTCTTTTGCTGCATTTGATATACAGCAACTGGACTAGATGT
GCCTGTGGCGGCTACTTGTATTCCAAGTGTCGACTTGTAAATAGTGGAGA
ACCTATACCCTTATTTGATATAAACGTGAAAAC
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