CX287154
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287154 vs. ExPASy Swiss-Prot
Match: PUM2_MOUSE (Pumilio homolog 2 OS=Mus musculus GN=Pum2 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.019e-15 Identity = 38/74 (51.35%), Postives = 55/74 (74.32%), Query Frame = -2 Query: 364 ERQLLVDEMLGSTD-ENEPLQAMMKDQFANYVVQKVLETCEDQQRELILSRIKVHLNALKKYTYGKHIVARVEK 582 ER LL+DE+ D + L MMKDQ+ANYVVQK+++ E QR++I+ +I+ H+ L+KYTYGKHI+A++EK Sbjct: 973 ERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1046
BLAST of CX287154 vs. ExPASy Swiss-Prot
Match: PUM2_HUMAN (Pumilio homolog 2 OS=Homo sapiens GN=PUM2 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.019e-15 Identity = 38/74 (51.35%), Postives = 55/74 (74.32%), Query Frame = -2 Query: 364 ERQLLVDEMLGSTD-ENEPLQAMMKDQFANYVVQKVLETCEDQQRELILSRIKVHLNALKKYTYGKHIVARVEK 582 ER LL+DE+ D + L MMKDQ+ANYVVQK+++ E QR++I+ +I+ H+ L+KYTYGKHI+A++EK Sbjct: 973 ERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1046
BLAST of CX287154 vs. ExPASy Swiss-Prot
Match: PUM1_CHICK (Pumilio homolog 1 OS=Gallus gallus GN=PUM1 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.783e-15 Identity = 36/74 (48.65%), Postives = 55/74 (74.32%), Query Frame = -2 Query: 364 ERQLLVDEMLGSTD-ENEPLQAMMKDQFANYVVQKVLETCEDQQRELILSRIKVHLNALKKYTYGKHIVARVEK 582 ER +L+DE+ D + L MMKDQ+ANYVVQK+++ E QR++++ +I+ H+ L+KYTYGKHI+A++EK Sbjct: 1096 ERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 1169
BLAST of CX287154 vs. ExPASy Swiss-Prot
Match: PUM1_PONAB (Pumilio homolog 1 OS=Pongo abelii GN=PUM1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.498e-14 Identity = 36/74 (48.65%), Postives = 55/74 (74.32%), Query Frame = -2 Query: 364 ERQLLVDEMLGSTD-ENEPLQAMMKDQFANYVVQKVLETCEDQQRELILSRIKVHLNALKKYTYGKHIVARVEK 582 ER +L+DE+ D + L MMKDQ+ANYVVQK+++ E QR++++ +I+ H+ L+KYTYGKHI+A++EK Sbjct: 1093 ERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 1166
BLAST of CX287154 vs. ExPASy Swiss-Prot
Match: PUM1_MOUSE (Pumilio homolog 1 OS=Mus musculus GN=Pum1 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.498e-14 Identity = 36/74 (48.65%), Postives = 55/74 (74.32%), Query Frame = -2 Query: 364 ERQLLVDEMLGSTD-ENEPLQAMMKDQFANYVVQKVLETCEDQQRELILSRIKVHLNALKKYTYGKHIVARVEK 582 ER +L+DE+ D + L MMKDQ+ANYVVQK+++ E QR++++ +I+ H+ L+KYTYGKHI+A++EK Sbjct: 1096 ERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 1169
BLAST of CX287154 vs. ExPASy Swiss-Prot
Match: PUM1_HUMAN (Pumilio homolog 1 OS=Homo sapiens GN=PUM1 PE=1 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 1.498e-14 Identity = 36/74 (48.65%), Postives = 55/74 (74.32%), Query Frame = -2 Query: 364 ERQLLVDEMLGSTD-ENEPLQAMMKDQFANYVVQKVLETCEDQQRELILSRIKVHLNALKKYTYGKHIVARVEK 582 ER +L+DE+ D + L MMKDQ+ANYVVQK+++ E QR++++ +I+ H+ L+KYTYGKHI+A++EK Sbjct: 1093 ERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 1166
BLAST of CX287154 vs. ExPASy Swiss-Prot
Match: PUM_DROME (Maternal protein pumilio OS=Drosophila melanogaster GN=pum PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 8.220e-13 Identity = 36/73 (49.32%), Postives = 53/73 (72.60%), Query Frame = -2 Query: 364 ERQLLVDEMLGSTDENEPLQAMMKDQFANYVVQKVLETCEDQQRELILSRIKVHLNALKKYTYGKHIVARVEK 582 ER L+DE+ T + L MMKDQ+ANYVVQK+++ E Q + ++++I+ H+ AL+KYTYGKHI A++EK Sbjct: 1356 ERTGLIDEVC--TFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYGKHINAKLEK 1426
BLAST of CX287154 vs. ExPASy Swiss-Prot
Match: PUF3_SCHPO (mRNA-binding protein puf3 OS=Schizosaccharomyces pombe GN=puf3 PE=2 SV=4) HSP 1 Score: 70.0922 bits (170), Expect = 9.088e-12 Identity = 30/74 (40.54%), Postives = 55/74 (74.32%), Query Frame = -2 Query: 364 ERQLLVDEMLGSTDEN-EPLQAMMKDQFANYVVQKVLETCEDQQRELILSRIKVHLNALKKYTYGKHIVARVEK 582 +R+ ++++++ EN L MMKD++ANYV+QK+L+ +++R+L++S I H++ LKK+TYGKH++ VE+ Sbjct: 641 DRRRILNKIISEKAENCSILMLMMKDKYANYVIQKLLDASPEEERDLLISYIYPHISVLKKFTYGKHLIMSVER 714 The following BLAST results are available for this feature:
BLAST of CX287154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287154 ID=CX287154; Name=CX287154; organism=Citrus clementina; type=EST; length=583bpback to top |