CX287167

Overview
NameCX287167
Unique NameCX287167
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15160 contig Ccv1_Contig15160:267..964. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX287167 vs. ExPASy Swiss-Prot
Match: METE_MESCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mesembryanthemum crystallinum GN=METE PE=2 SV=1)

HSP 1 Score: 437.573 bits (1124), Expect = 3.081e-122
Identity = 212/232 (91.38%), Postives = 222/232 (95.69%), Query Frame = 3 
Query:    3 IGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSMAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITNCGVQDTTQVHTHMCYSNFNDIIHSIMDMDADVI 698
            IGSFPQT++LRRVRRE+KAKKISE++YVK IKEEI+ VVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAF+ NGWVQSYGSRCVKPPIIYGDVSRP  MTVFWSSMAQSMT RPMKGMLTGPVTILNWSFVRNDQPR ETCYQIALAIK+EVEDLEKAGI VIQIDEAALREGLPLRKSE DFYLKWAVHSFRITN GVQDTTQ+HTHMCYSNFNDIIHSI+DMDADVI
Sbjct:  437 IGSFPQTVELRRVRREYKAKKISEEEYVKAIKEEISKVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFSANGWVQSYGSRCVKPPIIYGDVSRPNPMTVFWSSMAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKNEVEDLEKAGINVIQIDEAALREGLPLRKSEHDFYLKWAVHSFRITNVGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVI 668
[Close]
BLAST of CX287167 vs. ExPASy Swiss-Prot
Match: METE_SOLSC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Solenostemon scutellarioides GN=MET PE=1 SV=2)

HSP 1 Score: 435.261 bits (1118), Expect = 1.529e-121
Identity = 211/232 (90.95%), Postives = 221/232 (95.26%), Query Frame = 3 
Query:    3 IGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSMAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITNCGVQDTTQVHTHMCYSNFNDIIHSIMDMDADVI 698
            IGSFPQT++LRRVRREFK  +ISE++YVK IKEEIN VVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFT NGWVQSYGSRCVKPPIIYGDVSRPK MTVFWS+ AQSMT+RPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSE  FYL WAVHSFRITN GVQDTTQ+HTHMCYSNFNDIIHSI++MDADVI
Sbjct:  436 IGSFPQTVELRRVRREFKPTRISEEEYVKAIKEEINKVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTAAQSMTQRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNVGVQDTTQIHTHMCYSNFNDIIHSIINMDADVI 667
[Close]
BLAST of CX287167 vs. ExPASy Swiss-Prot
Match: METE_ARATH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Arabidopsis thaliana GN=CIMS PE=1 SV=1)

HSP 1 Score: 434.876 bits (1117), Expect = 1.997e-121
Identity = 209/232 (90.09%), Postives = 220/232 (94.83%), Query Frame = 3 
Query:    3 IGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSMAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITNCGVQDTTQVHTHMCYSNFNDIIHSIMDMDADVI 698
            IGSFPQT++LRRVRRE+KAKK+SE+DYVK IKEEI  VV LQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFT NGWVQSYGSRCVKPP+IYGDVSRPKAMTVFWS+MAQSMT RPMKGMLTGPVTILNWSFVRNDQPR ETCYQIALAIKDEVEDLEK GI VIQIDEAALREGLPLRKSE  FYL WAVHSFRITNCGVQD+TQ+HTHMCYS+FNDIIHSI+DMDADVI
Sbjct:  437 IGSFPQTVELRRVRREYKAKKVSEEDYVKAIKEEIKKVVDLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPVIYGDVSRPKAMTVFWSAMAQSMTSRPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDSTQIHTHMCYSHFNDIIHSIIDMDADVI 668
[Close]
BLAST of CX287167 vs. ExPASy Swiss-Prot
Match: METE_CATRO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Catharanthus roseus GN=METE PE=2 SV=1)

HSP 1 Score: 433.721 bits (1114), Expect = 4.449e-121
Identity = 210/232 (90.52%), Postives = 219/232 (94.40%), Query Frame = 3 
Query:    3 IGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSMAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITNCGVQDTTQVHTHMCYSNFNDIIHSIMDMDADVI 698
            IGSFPQT++LRRVRRE+KAKKISEDDYVK IKEEI+ VVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFT NGWVQSYGSRCVKPPIIYGDVSRP  MTVFWS  AQSMTKRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGI VIQIDEAALREGLPLRK+E  FYL WAVHSFRITN  +QDTTQ+HTHMCYSNFNDIIHSI+DMDADV+
Sbjct:  437 IGSFPQTLELRRVRREYKAKKISEDDYVKAIKEEISKVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPNPMTVFWSQTAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKAEHAFYLDWAVHSFRITNLPLQDTTQIHTHMCYSNFNDIIHSIIDMDADVM 668
[Close]
BLAST of CX287167 vs. ExPASy Swiss-Prot
Match: METE_BURA4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia ambifaria (strain MC40-6) GN=metE PE=3 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 3.550e-94
Identity = 166/232 (71.55%), Postives = 194/232 (83.62%), Query Frame = 3 
Query:    3 IGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSMAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITNCGVQDTTQVHTHMCYSNFNDIIHSIMDMDADVI 698
            IGSFPQT D+R+ RR+FK+  + E  Y   ++ EI   V+ QE L++DVLVHGE ERNDMVEYFGEQL G+AF+  GWVQSYGSRCVKPPI++GD+SRPKAMTV W + AQS+T +PMKGMLTGPVTILNWSFVR+DQPR  +CYQ+ALAI+DEV DLEKAG+ VIQIDEAALREGLPLR+++   YLKWAV +FRIT  GVQD TQ+HTHMCYS FNDII SI DMDADVI
Sbjct:  440 IGSFPQTADIRQARRQFKSGALDEAGYRAAMQAEIERSVREQESLELDVLVHGEAERNDMVEYFGEQLDGYAFSQFGWVQSYGSRCVKPPILFGDISRPKAMTVEWITYAQSLTNKPMKGMLTGPVTILNWSFVRDDQPRSVSCYQLALAIRDEVLDLEKAGVRVIQIDEAALREGLPLRRAQWGEYLKWAVEAFRITANGVQDDTQIHTHMCYSEFNDIIASIADMDADVI 671
[Close]
BLAST of CX287167 vs. ExPASy Swiss-Prot
Match: METE_BURCC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cenocepacia (strain MC0-3) GN=metE PE=3 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 4.636e-94
Identity = 166/232 (71.55%), Postives = 194/232 (83.62%), Query Frame = 3 
Query:    3 IGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSMAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITNCGVQDTTQVHTHMCYSNFNDIIHSIMDMDADVI 698
            IGSFPQT ++R+ R  FKA  + E  Y K ++ EI   V+ QE L++DVLVHGE ERNDMVEYFGEQL G+AF+  GWVQSYGSRCVKPPI++GD+SRPKAMTV W + AQS+T++PMKGMLTGPVTILNWSFVR+DQPR  +CYQ+ALAI++EV DLEKAG+ VIQIDEAALREGLPLR+++   YLKWAV SFRIT  GVQD TQ+HTHMCYS FNDII SI DMDADVI
Sbjct:  440 IGSFPQTAEIRQARSRFKAGALDEAGYRKAMQAEIERSVREQESLELDVLVHGEAERNDMVEYFGEQLDGYAFSQFGWVQSYGSRCVKPPILFGDISRPKAMTVEWIAYAQSLTRKPMKGMLTGPVTILNWSFVRDDQPRAVSCYQLALAIREEVLDLEKAGVRVIQIDEAALREGLPLRRAQWSEYLKWAVESFRITANGVQDDTQIHTHMCYSEFNDIIASIADMDADVI 671
[Close]
BLAST of CX287167 vs. ExPASy Swiss-Prot
Match: METE_BURS3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia sp. (strain 383) GN=metE PE=3 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 1.033e-93
Identity = 166/232 (71.55%), Postives = 194/232 (83.62%), Query Frame = 3 
Query:    3 IGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSMAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITNCGVQDTTQVHTHMCYSNFNDIIHSIMDMDADVI 698
            IGSFPQT ++R+ R +FKA  + E  Y K ++ EI   V+ QE L++DVLVHGE ERNDMVEYFGEQL G+AF+  GWVQSYGSRCVKPPI++GD+SRPKAMTV W + AQS+T +PMKGMLTGPVTILNWSFVR+DQPR  +CYQ+ALAI++EV DLEKAG+ VIQIDEAALREGLPLR+++   YLKWAV SFRIT  GVQD TQ+HTHMCYS FNDII SI DMDADVI
Sbjct:  440 IGSFPQTGEIRQARSQFKAGTLDEAGYRKAMQAEIERSVREQESLELDVLVHGEAERNDMVEYFGEQLDGYAFSQFGWVQSYGSRCVKPPILFGDISRPKAMTVEWITYAQSLTNKPMKGMLTGPVTILNWSFVRDDQPRSVSCYQLALAIREEVLDLEKAGVRVIQIDEAALREGLPLRRAQWGEYLKWAVESFRITANGVQDDTQIHTHMCYSEFNDIIASIADMDADVI 671
[Close]
BLAST of CX287167 vs. ExPASy Swiss-Prot
Match: METE_BURCM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=metE PE=3 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 2.301e-93
Identity = 166/232 (71.55%), Postives = 191/232 (82.33%), Query Frame = 3 
Query:    3 IGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSMAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITNCGVQDTTQVHTHMCYSNFNDIIHSIMDMDADVI 698
            IGSFPQT D+R  R +FKA  + E  Y   ++ EI   V+ QE L +DVLVHGE ERNDMVEYFGEQL G+AF+  GWVQSYGSRCVKPPI++GD+SRPKAMTV W + AQS+T +PMKGMLTGPVTILNWSFVR+DQPR  +CYQ+ALAI+DEV DLEKAG+ VIQIDEAALREGLPLR+++   YLKWAV +FRIT  GVQD TQ+HTHMCYS FNDII SI DMDADVI
Sbjct:  440 IGSFPQTADIRHARSQFKAGALDEAGYRAAMQAEIERSVREQESLGLDVLVHGEAERNDMVEYFGEQLDGYAFSQFGWVQSYGSRCVKPPILFGDISRPKAMTVEWITYAQSLTNKPMKGMLTGPVTILNWSFVRDDQPRSVSCYQLALAIRDEVLDLEKAGVRVIQIDEAALREGLPLRRAQWGEYLKWAVEAFRITANGVQDDTQIHTHMCYSEFNDIIASIADMDADVI 671
[Close]
BLAST of CX287167 vs. ExPASy Swiss-Prot
Match: METE_BURCJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=metE PE=3 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 3.925e-93
Identity = 165/232 (71.12%), Postives = 192/232 (82.76%), Query Frame = 3 
Query:    3 IGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSMAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITNCGVQDTTQVHTHMCYSNFNDIIHSIMDMDADVI 698
            IGSFPQT ++R+ R  FKA  + E  Y   ++ EI   V+ QE L++DVLVHGE ERNDMVEYFGEQL G+AF+  GWVQSYGSRCVKPPI++GD+SRPKAMTV W + AQS+T +PMKGMLTGPVTILNWSFVR+DQPR  +CYQ+ALAI+DEV DLE+AG+ VIQIDEAALREGLPLR+++   YLKWAV SFRIT  GVQD TQ+HTHMCYS FNDII SI DMDADVI
Sbjct:  440 IGSFPQTAEIRQARSRFKAGTLDEAGYRTAMQAEIERSVREQESLELDVLVHGEAERNDMVEYFGEQLDGYAFSQFGWVQSYGSRCVKPPILFGDISRPKAMTVEWITYAQSLTNKPMKGMLTGPVTILNWSFVRDDQPRSVSCYQLALAIRDEVLDLEQAGVRVIQIDEAALREGLPLRRAQWSEYLKWAVESFRITANGVQDDTQIHTHMCYSEFNDIIASIADMDADVI 671
[Close]
BLAST of CX287167 vs. ExPASy Swiss-Prot
Match: METE_BURCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cenocepacia (strain HI2424) GN=metE PE=3 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 3.925e-93
Identity = 164/232 (70.69%), Postives = 193/232 (83.19%), Query Frame = 3 
Query:    3 IGSFPQTMDLRRVRREFKAKKISEDDYVKTIKEEINNVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSMAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITNCGVQDTTQVHTHMCYSNFNDIIHSIMDMDADVI 698
            IGSFPQT ++R+ R  F+A  + E  Y   ++ EI   V+ QE L++DVLVHGE ERNDMVEYFGEQL G+AF+  GWVQSYGSRCVKPPI++GD+SRPKAMTV W + AQS+T++PMKGMLTGPVTILNWSFVR+DQPR  +CYQ+ALAI++EV DLEKAG+ VIQIDEAALREGLPLR+++   YLKWAV SFRIT  GVQD TQ+HTHMCYS FNDII SI DMDADVI
Sbjct:  440 IGSFPQTAEIRQARSRFRAGALDEAGYRTAMRAEIERSVREQESLELDVLVHGEAERNDMVEYFGEQLDGYAFSQFGWVQSYGSRCVKPPILFGDISRPKAMTVEWIAYAQSLTRKPMKGMLTGPVTILNWSFVRDDQPRAVSCYQLALAIREEVLDLEKAGVRVIQIDEAALREGLPLRRAQWSEYLKWAVESFRITANGVQDDTQIHTHMCYSEFNDIIASIADMDADVI 671
The following BLAST results are available for this feature:
BLAST of CX287167 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
METE_MESCR3.081e-12291.385-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SOLSC1.529e-12190.955-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ARATH1.997e-12190.095-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CATRO4.449e-12190.525-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURA43.550e-9471.555-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCC4.636e-9471.555-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURS31.033e-9371.555-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCM2.301e-9371.555-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCJ3.925e-9371.125-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCH3.925e-9370.695-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC01005D09SK Veg1 Citrus clementina cDNA clone C01005D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287167 ID=CX287167; Name=CX287167; organism=Citrus clementina; type=EST; length=698bp
CCATTGGATCTTTCCCACAAACGATGGATCTCCGAAGAGTCCGACGTGAA
TTCAAGGCCAAGAAAATCTCTGAGGATGACTATGTCAAGACTATCAAGGA
GGAAATCAACAACGTTGTCAAGCTCCAGGAAGAACTTGACATTGATGTTT
TGGTGCATGGAGAACCAGAGAGGAATGATATGGTTGAGTACTTCGGTGAG
CAATTATCTGGTTTTGCCTTCACTGTGAATGGGTGGGTTCAATCTTATGG
CTCCCGCTGTGTCAAGCCTCCTATCATCTATGGTGATGTGAGCCGCCCCA
AGGCCATGACTGTCTTCTGGTCTTCAATGGCACAGAGTATGACCAAGCGA
CCAATGAAGGGAATGCTCACTGGCCCTGTCACCATTTTGAACTGGTCATT
TGTTCGAAATGATCAGCCCAGATTCGAGACCTGCTATCAGATTGCATTGG
CAATCAAGGATGAAGTTGAGGATCTTGAGAAAGCTGGTATCACTGTCATC
CAGATTGATGAGGCTGCTTTACGAGAGGGATTACCACTCAGGAAGTCTGA
GCAGGACTTTTATCTGAAATGGGCTGTGCACTCCTTTAGGATTACTAACT
GTGGTGTTCAAGACACTACCCAGGTCCATACCCACATGTGCTATTCAAAC
TTCAACGATATCATCCACTCAATTATGGACATGGACGCAGATGTGATC
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