CX287173
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287173 vs. ExPASy Swiss-Prot
Match: RUBB_ARATH (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Arabidopsis thaliana GN=At1g55490 PE=1 SV=3) HSP 1 Score: 268.855 bits (686), Expect = 1.413e-71 Identity = 134/182 (73.63%), Postives = 159/182 (87.36%), Query Frame = 3 Query: 3 QKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEGIVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVLSNDDPRYGYNAARNRYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVNIKESEPVPRRKLMPSS 548 +K LNERIA+LSGG+A++QVGAQT ELK+K+LR+EDALNATKAA+EEGIVVGGGC+LLRL++KV+ IK LDN+E+K+GA+I KRALSYP KLIAKNAGVNG+ V ++VLSND+ ++GYNAA +YEDLMAAGIIDPTKVVRCCLEHAASVAKTFL SD VVV IKE EPVP M +S Sbjct: 415 EKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKATLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNVKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPVGNPMDNS 596
BLAST of CX287173 vs. ExPASy Swiss-Prot
Match: RUBB_BRANA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 1.846e-71 Identity = 132/174 (75.86%), Postives = 156/174 (89.66%), Query Frame = 3 Query: 3 QKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEGIVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVLSNDDPRYGYNAARNRYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVNIKESEPVP 524 +K LNERIA+LSGG+A++QVGAQT ELK+K+LR+EDALNATKAA+EEGIVVGGGC+LLRL++KV+ IK LDN+E+K+GA+I KRALSYP KLIAKNAGVNG+ V ++VLSND+ ++GYNAA +YEDLMAAGIIDPTKVVRCCLEHAASVAKTFL SD VVV IKE EPVP Sbjct: 415 EKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKAALDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNVKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVP 588
BLAST of CX287173 vs. ExPASy Swiss-Prot
Match: RUBB_SECCE (RuBisCO large subunit-binding protein subunit beta, chloroplastic (Fragment) OS=Secale cereale GN=CPN60 PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 1.197e-70 Identity = 132/182 (72.53%), Postives = 158/182 (86.81%), Query Frame = 3 Query: 3 QKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEGIVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVLSNDDPRYGYNAARNRYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVNIKESEPVPRRKLMPSS 548 +K LNERIA+L+GG+A++QVGAQT ELK+K+LR+EDALNATKAA+EEGIVVGGGC+LLRL+AKV+ IK+ L+N+EQK+GAEI +RAL YP KLIAKNAGVNG+ V ++VLSND+ ++GYNAA +YEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSD VVV IKE E P M +S Sbjct: 314 EKEKLNERIAKLAGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKVDAIKDTLENDEQKVGAEIVRRALCYPLKLIAKNAGVNGSVVTEKVLSNDNFKFGYNAATGQYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVEIKEPEAAPLANPMDNS 495
BLAST of CX287173 vs. ExPASy Swiss-Prot
Match: RUBB_PEA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 262.307 bits (669), Expect = 1.323e-69 Identity = 130/182 (71.43%), Postives = 158/182 (86.81%), Query Frame = 3 Query: 3 QKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEGIVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVLSNDDPRYGYNAARNRYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVNIKESEPVPRRKLMPSS 548 +K L+ERIA+LSGG+A++QVGAQT ELK+K+LR+EDALNATKAA+EEGIVVGGGC+LLRL++KV+ IK+ L N+E+K+GA+I KRALSYP KLIAKNAGVNG+ V ++VLS+D+P+YGYNAA +YEDLMAAGIIDPTKVVRCCLEHA+SVAKTFL SD VVV IKE E P M +S Sbjct: 409 EKEKLSERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKDTLANDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPESAPVGNPMDNS 590
BLAST of CX287173 vs. ExPASy Swiss-Prot
Match: RUBC_CHLRE (RuBisCO large subunit-binding protein subunit beta-2 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 6.359e-64 Identity = 124/175 (70.86%), Postives = 144/175 (82.29%), Query Frame = 3 Query: 3 QKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEGIVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVLSN-DDPRYGYNAARNRYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVNIKESEPVP 524 +K LNERIARLSGG+AI+QVGAQT ELK+K+LR+EDALNATKAA+EEGIV+GGGC+LLRLS KV+ IKE L NEEQK+GA+I KRALSYP KLIA NAG NG+ V+ +V+ N D P YGYNAA + +EDLM AGIIDPTKVVRC LE+A SVAKTFL +D VV I E E P Sbjct: 76 EKEKLNERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVIGGGCTLLRLSQKVDSIKETLSNEEQKMGADIIKRALSYPIKLIANNAGTNGSVVMQRVMDNIDQPYYGYNAATDTFEDLMEAGIIDPTKVVRCSLENAVSVAKTFLLADVVVTEIPEKEKAP 250
BLAST of CX287173 vs. ExPASy Swiss-Prot
Match: RUBB_CHLRE (RuBisCO large subunit-binding protein subunit beta-1 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 9.834e-57 Identity = 110/172 (63.95%), Postives = 141/172 (81.98%), Query Frame = 3 Query: 3 QKNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEGIVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVLSN-DDPRYGYNAARNRYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVNIKESE 515 ++ L ERIARLSGG+AI+QVGAQT ELK+K+LR+EDALNAT+AA+EEG+V GGGC+LLRLS KV+ IK + + EQ++GA+I KRAL YP KLIA+NAGVNG+ V+++V+ N D P YGYNAA + +E+LM GIIDP+KVVRC +E+A SVAKTFL +D VV +KE E Sbjct: 245 EREKLQERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNATRAAVEEGVVPGGGCTLLRLSEKVDVIKRRMTDPEQQMGADIIKRALCYPIKLIAQNAGVNGSVVMNEVMKNLDRPHYGYNAATDSFENLMETGIIDPSKVVRCSMENAVSVAKTFLLADVVVTELKEIE 416
BLAST of CX287173 vs. ExPASy Swiss-Prot
Match: CH601_TRIEI (60 kDa chaperonin 1 OS=Trichodesmium erythraeum (strain IMS101) GN=groL1 PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 2.968e-45 Identity = 96/170 (56.47%), Postives = 125/170 (73.53%), Query Frame = 3 Query: 6 KNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEGIVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVLSNDDPRYGYNAARNRYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVNIKESE 515 K L ERIA+L+GG+A+++VGA T ELKD++LRIEDALNATKAA+EEGIV GGG +L+ LS KVE +K L+NEE+KIGA+I +RAL P IA N+GV G+ +V++V S D GYN YEDL+AAGI+DP VVR L++A S+A LT++AVVV E + Sbjct: 360 KEKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVEEGIVPGGGTTLIHLSTKVEELKGSLNNEEEKIGADIVRRALEAPLNQIANNSGVEGSVIVEKVRSTDF-SVGYNVITGEYEDLIAAGILDPAMVVRSALQNAGSIAGMVLTTEAVVVEKPEKK 528
BLAST of CX287173 vs. ExPASy Swiss-Prot
Match: CH602_ANAVT (60 kDa chaperonin 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL2 PE=3 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 4.285e-44 Identity = 97/167 (58.08%), Postives = 127/167 (76.05%), Query Frame = 3 Query: 15 LNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEGIVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVLSNDDPRYGYNAARNRYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVNIKESE 515 L ERIA+L+GGIA+++VGA T ELKD++LRIEDALNATKAA+ EGIV GGG +L+ L++KV+ IK+ D EE+KIGA+I KRAL P + IA NAGV G+ +V +V + D GYNAA +EDL+AAGIIDP KVVR L++AAS+A LT++A+VV E + Sbjct: 363 LQERIAKLAGGIAVIKVGAATETELKDRKLRIEDALNATKAAVAEGIVPGGGKTLIYLASKVDEIKKNFD-EEEKIGADIVKRALEAPLRQIADNAGVEGSVIVSRV-KDSDFNTGYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEAIVVEKPEKK 527
BLAST of CX287173 vs. ExPASy Swiss-Prot
Match: CH602_ANASP (60 kDa chaperonin 2 OS=Anabaena sp. (strain PCC 7120) GN=groL2 PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 9.547e-44 Identity = 96/167 (57.49%), Postives = 126/167 (75.45%), Query Frame = 3 Query: 15 LNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEGIVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVLSNDDPRYGYNAARNRYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVNIKESE 515 L ERIA+L+GGIA+++VGA T ELKD++LRIEDALNATKAA+ EGIV GGG +L+ L++KV+ IK+ D EE+KIGA+I KRAL P + IA NAG G+ +V +V + D GYNAA +EDL+AAGIIDP KVVR L++AAS+A LT++A+VV E + Sbjct: 363 LQERIAKLAGGIAVIKVGAATETELKDRKLRIEDALNATKAAVAEGIVPGGGKTLIYLASKVDEIKKNFD-EEEKIGADIVKRALEAPLRQIADNAGAEGSVIVSRV-KDSDFNIGYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEAIVVEKPEKK 527
BLAST of CX287173 vs. ExPASy Swiss-Prot
Match: CH602_SYNY3 (60 kDa chaperonin 2 OS=Synechocystis sp. (strain PCC 6803) GN=groL2 PE=1 SV=4) HSP 1 Score: 173.326 bits (438), Expect = 8.082e-43 Identity = 91/179 (50.84%), Postives = 125/179 (69.83%), Query Frame = 3 Query: 6 KNILNERIARLSGGIAILQVGAQTVVELKDKQLRIEDALNATKAAIEEGIVVGGGCSLLRLSAKVEGIKELLDNEEQKIGAEIFKRALSYPTKLIAKNAGVNGNFVVDQVLSNDDPRYGYNAARNRYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVNIKESEPVPRRKLMP 542 K + ERIA+L+GG+A+++VGA T ELKD++LRIEDALNATKAA+EEGIV GGG +L+RL+ K+E K L N+E+++ A+I +AL P +A NAGV G+ +V++V GYN + EDL+AAGIIDP KVVR L++AAS+A LT++A+VV +P P MP Sbjct: 362 KEKIQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVEEGIVPGGGTTLIRLAGKIESFKAQLSNDEERVAADIIAKALEAPLHQLASNAGVEGSVIVEKV-KEATGNQGYNVITGKIEDLIAAGIIDPAKVVRSALQNAASIAGMVLTTEALVV----EKPEPAAPAMP 535 The following BLAST results are available for this feature:
BLAST of CX287173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287173 ID=CX287173; Name=CX287173; organism=Citrus clementina; type=EST; length=601bpback to top |