CX287239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB86_ARATH (Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.103e-51 Identity = 85/118 (72.03%), Postives = 104/118 (88.14%), Query Frame = 3 Query: 72 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRK 425 MG HSCC +QK+++GLWSPEEDEKL+ YIT HG+GCWS VP+ AGLQRCGKSCRLRWINYLRPD++RG F+ +EE LII LH+ +GNRW+ IA+ LPGRTDNEIKN+WNS +KKK+R+ Sbjct: 1 MGRHSCCFKQKLRKGLWSPEEDEKLLNYITRHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFWNSCLKKKLRR 118
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB46_ARATH (Transcription factor MYB46 OS=Arabidopsis thaliana GN=MYB46 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 7.655e-45 Identity = 75/109 (68.81%), Postives = 97/109 (88.99%), Query Frame = 3 Query: 99 QKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRK 425 +K+K+GLWSPEED KL++Y+ ++G GCWS+V + AGLQRCGKSCRLRWINYLRPD++RG F+P+EE LII HS++GNRW+ IA+ LPGRTDNEIKN+WNS IKK+++K Sbjct: 16 KKMKKGLWSPEEDSKLMQYMLSNGQGCWSDVAKNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEDLIIRFHSILGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKK 124
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB3_HORVU (Myb-related protein Hv33 OS=Hordeum vulgare GN=MYB2 PE=2 SV=3) HSP 1 Score: 178.333 bits (451), Expect = 1.705e-44 Identity = 77/110 (70.00%), Postives = 92/110 (83.64%), Query Frame = 3 Query: 96 QQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRK 425 Q KV++GLWSPEEDEKL +I HG GCWS VP A L RCGKSCRLRWINYLRPD++RG F+ +EE I++LH ++GNRW+ IASHLPGRTDNEIKN+WNS IKKK+R+ Sbjct: 11 QPKVRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCFSQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQ 120
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB32_ARATH (Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 6.481e-44 Identity = 74/116 (63.79%), Postives = 91/116 (78.45%), Query Frame = 3 Query: 72 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 MG CC + +G W+ EED+KLI YI HG GCW +P AGLQRCGKSCRLRWINYLRPD++RG FT EE+ LII LHS++GN+W+ IA+ LPGRTDNEIKNYWN+ +K+K+ Sbjct: 1 MGRSPCCEKDHTNKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINYLRPDLKRGNFTLEEDDLIIKLHSLLGNKWSLIATRLPGRTDNEIKNYWNTHVKRKL 116
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB4_ARATH (Transcription repressor MYB4 OS=Arabidopsis thaliana GN=MYB4 PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 5.486e-43 Identity = 72/116 (62.07%), Postives = 91/116 (78.45%), Query Frame = 3 Query: 72 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 MG CC + +G W+ EEDE+L+ YI HG GCW +P+ AGL RCGKSCRLRWINYLRPD++RG FT EE++LII LHS++GN+W+ IA LPGRTDNEIKNYWN+ I++K+ Sbjct: 1 MGRSPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKL 116
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB3_ARATH (Transcription factor MYB3 OS=Arabidopsis thaliana GN=MYB3 PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 9.358e-43 Identity = 72/116 (62.07%), Postives = 91/116 (78.45%), Query Frame = 3 Query: 72 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 MG CC + + +G W+ EED+ L+ YI HG GCW +P AGLQRCGKSCRLRW+NYLRPD++RG FT EE++LII LHS++GN+W+ IA LPGRTDNEIKNYWN+ IK+K+ Sbjct: 1 MGRSPCCEKAHMNKGAWTKEEDQLLVDYIRKHGEGCWRSLPRAAGLQRCGKSCRLRWMNYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 116
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB30_ANTMA (Myb-related protein 330 OS=Antirrhinum majus GN=MYB330 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 9.358e-43 Identity = 72/116 (62.07%), Postives = 91/116 (78.45%), Query Frame = 3 Query: 72 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 MG CC + +G W+ EED++LI YI HG GCW +P+ AGL RCGKSCRLRWINYLRPD++RG FT EE+++II LHS++GN+W+ IA LPGRTDNEIKNYWN+ IK+K+ Sbjct: 1 MGRSPCCEKAHTNKGAWTKEEDQRLINYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDEIIIKLHSLLGNKWSLIAGALPGRTDNEIKNYWNTHIKRKL 116
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB38_MAIZE (Myb-related protein Zm38 OS=Zea mays PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.222e-42 Identity = 70/116 (60.34%), Postives = 91/116 (78.45%), Query Frame = 3 Query: 72 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 MG CC + RG W+ EEDE+L+ YI HG GCW +P+ AGL RCGKSCRLRWINYLRPD++RG FT +E+ LI+ LHS++GN+W+ IA+ LPGRTDNEIKNYWN+ +++K+ Sbjct: 1 MGRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKL 116
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB08_ANTMA (Myb-related protein 308 OS=Antirrhinum majus GN=MYB308 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.222e-42 Identity = 71/116 (61.21%), Postives = 91/116 (78.45%), Query Frame = 3 Query: 72 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 MG CC + +G W+ EED++L+ YI HG GCW +P+ AGL RCGKSCRLRWINYLRPD++RG FT EE++LII LHS++GN+W+ IA LPGRTDNEIKNYWN+ I++K+ Sbjct: 1 MGRSPCCEKAHTNKGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKL 116
BLAST of CX287239 vs. ExPASy Swiss-Prot
Match: MYB6_ARATH (Transcription repressor MYB6 OS=Arabidopsis thaliana GN=MYB6 PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.085e-42 Identity = 70/116 (60.34%), Postives = 91/116 (78.45%), Query Frame = 3 Query: 72 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKI 419 MG CC + +G W+ EED++L+ YI HG GCW +P+ AGL RCGKSCRLRWINYLRPD++RG FT +E+++II LHS++GN+W+ IA LPGRTDNEIKNYWN+ IK+K+ Sbjct: 1 MGRSPCCEKAHTNKGAWTKEEDQRLVDYIRNHGEGCWRSLPKSAGLLRCGKSCRLRWINYLRPDLKRGNFTDDEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 116 The following BLAST results are available for this feature:
BLAST of CX287239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287239 ID=CX287239; Name=CX287239; organism=Citrus clementina; type=EST; length=503bpback to top |