CX287255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287255 vs. ExPASy Swiss-Prot
Match: AIG1_ARATH (Protein AIG1 OS=Arabidopsis thaliana GN=AIG1 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.479e-35 Identity = 75/137 (54.74%), Postives = 93/137 (67.88%), Query Frame = 3 Query: 123 DDWELTSPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVF 533 D++ + P E +VLVGRTGNGKSATGNSI+ + FKS+ SSGVT C + V +G ++NVIDTPGLFD S +EF+GKEIVKC+ +A G+HAVL QEEE L +LQ LFG KI DY+IVVF Sbjct: 32 DEFSASQPHPVEN-IVLVGRTGNGKSATGNSIVRSKVFKSKTKSSGVTMECHAVKAVTPEGPILNVIDTPGLFDLSVSAEFIGKEIVKCLTLADGGLHAVLLVLSVRTRISQEEEMVLSTLQVLFGSKIVDYLIVVF 167
BLAST of CX287255 vs. ExPASy Swiss-Prot
Match: P2A03_ARATH (Putative protein PHLOEM PROTEIN 2-LIKE A3 OS=Arabidopsis thaliana GN=PP2A3 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 6.693e-31 Identity = 62/125 (49.60%), Postives = 87/125 (69.60%), Query Frame = 3 Query: 159 RTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVF 533 + +VLVGRTGNGKS+TGN++LG + FKS+ + GVT CEM R ++DG ++NVIDTPGL D + + EI+ C+ MA++GIHAVL +EEE+ +++LQ +FG +I DY IVVF Sbjct: 6 KNIVLVGRTGNGKSSTGNTLLGTKQFKSKNQAKGVTMICEMYRAAIQDGPIINVIDTPGLCDSFVPGDDISNEIINCLTMAEEGIHAVLLVLSARGRISKEEESTVNTLQCIFGSQILDYCIVVF 130
BLAST of CX287255 vs. ExPASy Swiss-Prot
Match: GIMA4_HUMAN (GTPase IMAP family member 4 OS=Homo sapiens GN=GIMAP4 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.386e-20 Identity = 51/130 (39.23%), Postives = 78/130 (60.00%), Query Frame = 3 Query: 144 PSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVF 533 P N + +VLVG+TG GKSATGNSILGR+ F S ++ +T CE + + K+ ++V V+DTPG+FD + KEI++CI + G HA+L +EE A + +FG++ +MI++F Sbjct: 26 PRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWKETELV-VVDTPGIFDTEVPNAETSKEIIRCILLTSPGPHALL-LVVPLGRYTEEEHKATEKILKMFGERARSFMILIF 153
BLAST of CX287255 vs. ExPASy Swiss-Prot
Match: GIMA4_RAT (GTPase IMAP family member 4 OS=Rattus norvegicus GN=Gimap4 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.225e-16 Identity = 48/122 (39.34%), Postives = 70/122 (57.38%), Query Frame = 3 Query: 165 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVV 530 +VL+G+TG GKS+TGNSILGR+AF S + +T CE + + DG+ + V+DTPG+FD KEI +C+ + G HA+L EE A L ++F KK +MI++ Sbjct: 33 IVLLGKTGAGKSSTGNSILGRKAFLSGICAKSITKVCE-KGVSIWDGKELVVVDTPGIFDTEVPDADTQKEITRCVALTSPGPHALLLVIPLGCYTV-EEHKATRKLLSMFEKKARRFMILL 152
BLAST of CX287255 vs. ExPASy Swiss-Prot
Match: GIMA7_HUMAN (GTPase IMAP family member 7 OS=Homo sapiens GN=GIMAP7 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.770e-15 Identity = 45/123 (36.59%), Postives = 71/123 (57.72%), Query Frame = 3 Query: 165 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVF 533 +VLVG+TG+GKSAT N+ILG F SR ++ VT C+ + G+ + V+DTPGLFD + KEI +CI + G HA++ +EE+ + ++ +FGK +M+++F Sbjct: 11 IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQ-GRDLLVVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIV-LVLLLGRYTEEEQKTVALIKAVFGKSAMKHMVILF 131
BLAST of CX287255 vs. ExPASy Swiss-Prot
Match: GIMA6_MOUSE (GTPase IMAP family member 6 OS=Mus musculus GN=Gimap6 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.311e-15 Identity = 53/123 (43.09%), Postives = 74/123 (60.16%), Query Frame = 3 Query: 165 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVF 533 ++LVG+TG+GKSATGNSILGR+AF+S+ S+ VT+T + + T +G+ + VIDTP +F E K+I C +A G HAVL E++A LQ +FG I Y I+VF Sbjct: 106 LLLVGKTGSGKSATGNSILGRQAFESKISARPVTTTFQ-KGTREFEGKELEVIDTPDIFSPQNQPEATAKKI--CDLLASPGPHAVL-LVIQVGRYTAEDQAVARCLQEIFGNTILAYTILVF 224
BLAST of CX287255 vs. ExPASy Swiss-Prot
Match: GIMA2_HUMAN (GTPase IMAP family member 2 OS=Homo sapiens GN=GIMAP2 PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 6.725e-15 Identity = 44/129 (34.11%), Postives = 74/129 (57.36%), Query Frame = 3 Query: 147 SNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVF 533 S E ++LVG+TG GKSA GNSIL ++AF+S+ S +T TC + + ++V +IDTP +F + E + KE+ +C ++ G H +L Q+++AA ++ +FG+ + IV+F Sbjct: 19 SRSELRIILVGKTGTGKSAAGNSILRKQAFESKLGSQTLTKTCSKSQGSWGNREIV-IIDTPDMFSWKDHCEALYKEVQRCYLLSAPGPHVLLLVTQLGRYTSQDQQAA-QRVKEIFGEDAMGHTIVLF 145
BLAST of CX287255 vs. ExPASy Swiss-Prot
Match: GIMA4_MOUSE (GTPase IMAP family member 4 OS=Mus musculus GN=Gimap4 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.147e-14 Identity = 44/122 (36.07%), Postives = 67/122 (54.92%), Query Frame = 3 Query: 165 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVV 530 +VL+G+TG GKS+TGNSILG + F S + +T CE +R DG+ + V+DTPG+FD +EI + + + G HA+L EE A + +FGK+ +MI++ Sbjct: 33 IVLLGKTGAGKSSTGNSILGEKVFNSGICAKSITKVCE-KRVSTWDGKELVVVDTPGIFDTEVPDADTQREITRYVALTSPGPHALLLVVPLGRYTV-EEHKATQKILDMFGKQARRFMILL 152
BLAST of CX287255 vs. ExPASy Swiss-Prot
Match: GIMA8_HUMAN (GTPase IMAP family member 8 OS=Homo sapiens GN=GIMAP8 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.498e-14 Identity = 46/126 (36.51%), Postives = 74/126 (58.73%), Query Frame = 3 Query: 156 ERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVF 533 E ++L+G+ +GKSATGN+ILG+ FKS+ S V C+ + VL++ +VV VIDTP LF A +E + I C+ ++ +HA+L ++EE A +Q +FG + ++I+VF Sbjct: 10 ELRLLLLGKCRSGKSATGNAILGKHVFKSKFSDQTVIKMCQRESWVLRERKVV-VIDTPDLFSSIACAEDKQRNIQHCLELSAPSLHALLLVIAIGHFTREDEETA-KGIQQVFGAEARRHIIIVF 133 HSP 2 Score: 70.4774 bits (171), Expect = 6.959e-12 Identity = 44/126 (34.92%), Postives = 64/126 (50.79%), Query Frame = 3 Query: 165 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPG---LFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVF 533 +VLVGR+G GKSATGNSILG F SR + VT T + R DGQ V V+DTP + D + +E+ +C+ + G +E++ A+ L+ +FG Y I++F Sbjct: 441 IVLVGRSGTGKSATGNSILGSLVFTSRLRAQPVTKTSQSGRRTW-DGQEVVVVDTPSFNQMLDVEKDPSRLEEEVKRCLSCCEKG-DTFFVLVFQLGRFTEEDKTAVAKLEAIFGADFTKYAIMLF 564 HSP 3 Score: 67.781 bits (164), Expect = 4.511e-11 Identity = 49/131 (37.40%), Postives = 68/131 (51.91%), Query Frame = 3 Query: 141 SPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVT-STCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVV 530 +P E TV+LVG+ G GKSA GNSILGR+AF++ S VT S R+ K + V++ID P + V K I G HA L + +EA L ++Q FG+K F+YMI++ Sbjct: 242 NPGTSELTVLLVGKRGAGKSAAGNSILGRQAFQTGFSEQSVTQSFLSESRSWRK--KKVSIIDAPDISSLKNIDSEVRKHIC-------TGPHAFL-LVTPLGFYTKNDEAVLSTIQNNFGEKFFEYMIIL 362
BLAST of CX287255 vs. ExPASy Swiss-Prot
Match: GIMA5_HUMAN (GTPase IMAP family member 5 OS=Homo sapiens GN=GIMAP5 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.498e-14 Identity = 47/149 (31.54%), Postives = 82/149 (55.03%), Query Frame = 3 Query: 87 GTFYMMGGSAIDDDWELTSPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVF 533 G + M +D+ T P+ ++LVG+TG GKSATGNSILG+ F+S+ + VT TC++ +T +G+ V V+DTP +F+ A ++ + K I C ++ G H +L Q + A+ ++ +FG +++++F Sbjct: 7 GKYGTMAEGRSEDNLSATPPA---LRIILVGKTGCGKSATGNSILGQPVFESKLRAQSVTRTCQV-KTGTWNGRKVLVVDTPSIFESQADTQELYKNIGDCYLLSAPGPHVLLLVIQLGRFTAQ-DTVAIRKVKEVFGTGAMRHVVILF 150 The following BLAST results are available for this feature:
BLAST of CX287255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287255 ID=CX287255; Name=CX287255; organism=Citrus clementina; type=EST; length=586bpback to top |