CX287289

Overview
NameCX287289
Unique NameCX287289
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length565
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287289 vs. ExPASy Swiss-Prot
Match: Y2245_ARATH (Uncharacterized TPR repeat-containing protein At2g32450 OS=Arabidopsis thaliana GN=At2g32450 PE=1 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 1.024e-89
Identity = 158/184 (85.87%), Postives = 169/184 (91.85%), Query Frame = 2
Query:   14 FKRACELQPTDVRPHFRAGNCLYVLGRYRXXXXXXXXXXXXXXTGGNQWAYLLPQIYVNLGIALEGEGMVLSACEYYRESAILCPTHFRALKLLGSALFGVGEYRAAVKALEEAIFIKPDYADAHCDLASALHAMGEDERAIEVFQKAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYARVLA 565
            FKRACELQPTDVRPHF+AGNCLYVLG+Y+              +GGNQWAYLLPQIYVNLGI+LEGEGMVLSACEYYRE+AILCPTH+RALKLLGSALFGVGEYRAAVKALEEAI++KPDYADAHCDLAS+LHAMGEDERAIEVFQ+AIDLKPGHVDALYNLGGLYMDLGRFQRASEMY RVLA
Sbjct:  252 FKRACELQPTDVRPHFKAGNCLYVLGKYKESKDEFLLALEAAESGGNQWAYLLPQIYVNLGISLEGEGMVLSACEYYREAAILCPTHYRALKLLGSALFGVGEYRAAVKALEEAIYLKPDYADAHCDLASSLHAMGEDERAIEVFQRAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYTRVLA 435          
BLAST of CX287289 vs. ExPASy Swiss-Prot
Match: Y1515_ARATH (Uncharacterized TPR repeat-containing protein At1g05150 OS=Arabidopsis thaliana GN=At1g05150 PE=1 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 1.479e-88
Identity = 157/183 (85.79%), Postives = 167/183 (91.26%), Query Frame = 2
Query:   14 FKRACELQPTDVRPHFRAGNCLYVLGRYRXXXXXXXXXXXXXXTGGNQWAYLLPQIYVNLGIALEGEGMVLSACEYYRESAILCPTHFRALKLLGSALFGVGEYRAAVKALEEAIFIKPDYADAHCDLASALHAMGEDERAIEVFQKAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYARVL 562
            FKRACELQPTDVRPHF+AGNCLYVLG+ +              +GGNQWAYLLPQIYVNLGIALEGEGMVLSACEYYRE+AILCPTHFRALKLLGSALFGVGEYRAAVKALEEAI++KPDYADAHCDLAS+LH+MGEDERAIEVFQ+AIDLKPGHVDALYNLGGLYMDLGRFQRASEMY RVL
Sbjct:  257 FKRACELQPTDVRPHFKAGNCLYVLGKCKESKDEFLLALEAAESGGNQWAYLLPQIYVNLGIALEGEGMVLSACEYYREAAILCPTHFRALKLLGSALFGVGEYRAAVKALEEAIYLKPDYADAHCDLASSLHSMGEDERAIEVFQRAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYTRVL 439          
BLAST of CX287289 vs. ExPASy Swiss-Prot
Match: OGT1_RAT (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Rattus norvegicus GN=Ogt PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.548e-13
Identity = 42/130 (32.31%), Postives = 67/130 (51.54%), Query Frame = 2
Query:  173 PQIYVNLGIALEGEGMVLSACEYYRESAILCPTHFRALKLLGSALFGVGEYRAAVKALEEAIFIKPDYADAHCDLASALHAMGEDERAIEVFQKAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYARVL 562
            P  Y NL  AL+ +G V  A + Y  +  LCPTH  +L  L +     G    AV+   +A+ + P++A AH +LAS L   G+ + A+  +++AI + P   DA  N+G    ++   Q A + Y R +
Sbjct:  283 PDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAI 412          
BLAST of CX287289 vs. ExPASy Swiss-Prot
Match: OGT1_PIG (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Sus scrofa GN=OGT PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.548e-13
Identity = 42/130 (32.31%), Postives = 67/130 (51.54%), Query Frame = 2
Query:  173 PQIYVNLGIALEGEGMVLSACEYYRESAILCPTHFRALKLLGSALFGVGEYRAAVKALEEAIFIKPDYADAHCDLASALHAMGEDERAIEVFQKAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYARVL 562
            P  Y NL  AL+ +G V  A + Y  +  LCPTH  +L  L +     G    AV+   +A+ + P++A AH +LAS L   G+ + A+  +++AI + P   DA  N+G    ++   Q A + Y R +
Sbjct:  293 PDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAI 422          
BLAST of CX287289 vs. ExPASy Swiss-Prot
Match: OGT1_MOUSE (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Mus musculus GN=Ogt PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 4.548e-13
Identity = 42/130 (32.31%), Postives = 67/130 (51.54%), Query Frame = 2
Query:  173 PQIYVNLGIALEGEGMVLSACEYYRESAILCPTHFRALKLLGSALFGVGEYRAAVKALEEAIFIKPDYADAHCDLASALHAMGEDERAIEVFQKAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYARVL 562
            P  Y NL  AL+ +G V  A + Y  +  LCPTH  +L  L +     G    AV+   +A+ + P++A AH +LAS L   G+ + A+  +++AI + P   DA  N+G    ++   Q A + Y R +
Sbjct:  293 PDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAI 422          
BLAST of CX287289 vs. ExPASy Swiss-Prot
Match: OGT1_HUMAN (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Homo sapiens GN=OGT PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 4.548e-13
Identity = 42/130 (32.31%), Postives = 67/130 (51.54%), Query Frame = 2
Query:  173 PQIYVNLGIALEGEGMVLSACEYYRESAILCPTHFRALKLLGSALFGVGEYRAAVKALEEAIFIKPDYADAHCDLASALHAMGEDERAIEVFQKAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYARVL 562
            P  Y NL  AL+ +G V  A + Y  +  LCPTH  +L  L +     G    AV+   +A+ + P++A AH +LAS L   G+ + A+  +++AI + P   DA  N+G    ++   Q A + Y R +
Sbjct:  293 PDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAI 422          
BLAST of CX287289 vs. ExPASy Swiss-Prot
Match: OGT1_CAEEL (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase OS=Caenorhabditis elegans GN=ogt-1 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.911e-11
Identity = 42/130 (32.31%), Postives = 66/130 (50.77%), Query Frame = 2
Query:  173 PQIYVNLGIALEGEGMVLSACEYYRESAILCPTHFRALKLLGSALFGVGEYRAAVKALEEAIFIKPDYADAHCDLASALHAMGEDERAIEVFQKAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYARVL 562
            P  Y NL  AL+ +G V+ A + Y ++  LCPTH  +   L +     G+   A +   +A+ I P++A AH +LAS L   G+   AI  +++AI + P   DA  N+G    ++G    A   Y R +
Sbjct:  397 PDAYCNLANALKEKGSVVEAEQMYMKALELCPTHADSQNNLANIKREQGKIEDATRLYLKALEIYPEFAAAHSNLASILQQQGKLNDAILHYKEAIRIAPTFADAYSNMGNTLKEMGDSSAAIACYNRAI 526          
The following BLAST results are available for this feature:
BLAST of CX287289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
Y2245_ARATH1.024e-8985.87Uncharacterized TPR repeat-containing protein At2g... [more]
Y1515_ARATH1.479e-8885.79Uncharacterized TPR repeat-containing protein At1g... [more]
OGT1_RAT4.548e-1332.31UDP-N-acetylglucosamine--peptide N-acetylglucosami... [more]
OGT1_PIG4.548e-1332.31UDP-N-acetylglucosamine--peptide N-acetylglucosami... [more]
OGT1_MOUSE4.548e-1332.31UDP-N-acetylglucosamine--peptide N-acetylglucosami... [more]
OGT1_HUMAN4.548e-1332.31UDP-N-acetylglucosamine--peptide N-acetylglucosami... [more]
OGT1_CAEEL1.911e-1132.31UDP-N-acetylglucosamine--peptide N-acetylglucosami... [more]
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Properties
Property NameValue
Genbank descriptionC01006H06SK Veg1 Citrus clementina cDNA clone C01006H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287289 ID=CX287289; Name=CX287289; organism=Citrus clementina; type=EST; length=565bp
ATTCGGCACGAGGTTTAAAAGGGCTTGTGAACTGCAACCAACAGATGTTA
GGCCACATTTTAGAGCTGGGAATTGTTTGTATGTTCTTGGGAGATATAGA
GAGGCAAAAGAGGAGTATTTGTTGGCTCTGGAGGCTGCTGAGACGGGTGG
TAATCAATGGGCATACTTGCTTCCTCAGATTTATGTCAATCTTGGCATTG
CGCTCGAAGGTGAAGGTATGGTTTTAAGTGCCTGTGAGTATTATAGAGAA
TCTGCAATTCTTTGCCCAACTCATTTTAGAGCTTTGAAGTTATTGGGTAG
TGCACTTTTTGGGGTGGGAGAGTACAGGGCAGCTGTTAAGGCATTAGAAG
AGGCTATTTTTATAAAACCAGACTATGCAGATGCGCATTGTGATTTAGCA
TCAGCTTTGCATGCCATGGGTGAGGATGAGAGGGCAATTGAGGTGTTTCA
GAAAGCTATTGATTTGAAACCGGGTCATGTAGACGCATTGTACAACTTGG
GCGGGCTCTACATGGACTTGGGTAGGTTCCAAAGAGCTTCTGAGATGTAT
GCTAGGGTTTTAGCA
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