CX287303
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287303 vs. ExPASy Swiss-Prot
Match: SAR1A_ARATH (GTP-binding protein SAR1A OS=Arabidopsis thaliana GN=SAR1A PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.653e-18 Identity = 41/44 (93.18%), Postives = 43/44 (97.73%), Query Frame = 1 Query: 1 NFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 132 NFTTGKGKVNL DSNVRPLEVFMCSIVRKMGYG+GFKW+SQYIK Sbjct: 150 NFTTGKGKVNLTDSNVRPLEVFMCSIVRKMGYGEGFKWVSQYIK 193
BLAST of CX287303 vs. ExPASy Swiss-Prot
Match: SAR1A_BRACM (GTP-binding protein SAR1A OS=Brassica campestris GN=SAR1A PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.828e-17 Identity = 40/44 (90.91%), Postives = 42/44 (95.45%), Query Frame = 1 Query: 1 NFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 132 NFTTGKGKV+L SNVRPLEVFMCSIVRKMGYG+GFKWLSQYIK Sbjct: 150 NFTTGKGKVDLVGSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 193
BLAST of CX287303 vs. ExPASy Swiss-Prot
Match: SAR1B_ARATH (GTP-binding protein SAR1B OS=Arabidopsis thaliana GN=SAR1B PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.945e-17 Identity = 39/43 (90.70%), Postives = 40/43 (93.02%), Query Frame = 1 Query: 1 NFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 129 NFTTGKGKV L DS VRPLEVFMCSIVRKMGYG+GFKWLSQYI Sbjct: 150 NFTTGKGKVTLGDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYI 192
BLAST of CX287303 vs. ExPASy Swiss-Prot
Match: SAR2_SOLLC (GTP-binding protein SAR2 OS=Solanum lycopersicum GN=SAR2 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.310e-15 Identity = 35/42 (83.33%), Postives = 40/42 (95.24%), Query Frame = 1 Query: 7 TTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 132 TTGKG +NLA +NVRP+EVFMCSIVRKMGYG+GFKW+SQYIK Sbjct: 152 TTGKGNINLAGTNVRPIEVFMCSIVRKMGYGEGFKWMSQYIK 193
BLAST of CX287303 vs. ExPASy Swiss-Prot
Match: SAR1B_BRACM (GTP-binding protein SAR1B OS=Brassica campestris GN=SAR1B PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.918e-15 Identity = 39/45 (86.67%), Postives = 40/45 (88.89%), Query Frame = 1 Query: 1 NFTTGKGKVNLA--DSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 129 NFTTGKGKV A DS VRPLEVFMCSIVRKMGYG+GFKWLSQYI Sbjct: 150 NFTTGKGKVTTAGGDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYI 194
BLAST of CX287303 vs. ExPASy Swiss-Prot
Match: SAR1_TOBAC (GTP-binding protein SAR1 OS=Nicotiana tabacum GN=SAR1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.470e-14 Identity = 33/39 (84.62%), Postives = 39/39 (100.00%), Query Frame = 1 Query: 16 KGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 132 +GKVNLADSNVRP+EVFMCSIVR+MGYG+GF+W+SQYIK Sbjct: 160 RGKVNLADSNVRPVEVFMCSIVRQMGYGEGFRWMSQYIK 198
BLAST of CX287303 vs. ExPASy Swiss-Prot
Match: SAR1A_PONAB (GTP-binding protein SAR1a OS=Pongo abelii GN=SAR1A PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.499e-11 Identity = 27/41 (65.85%), Postives = 35/41 (85.37%), Query Frame = 1 Query: 7 TTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 129 TTGKG V L + N RP+EVFMCS++++ GYG+GF+WLSQYI Sbjct: 157 TTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLSQYI 197
BLAST of CX287303 vs. ExPASy Swiss-Prot
Match: SAR1A_PIG (GTP-binding protein SAR1a OS=Sus scrofa GN=SAR1A PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.499e-11 Identity = 27/41 (65.85%), Postives = 35/41 (85.37%), Query Frame = 1 Query: 7 TTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 129 TTGKG V L + N RP+EVFMCS++++ GYG+GF+WLSQYI Sbjct: 157 TTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLSQYI 197
BLAST of CX287303 vs. ExPASy Swiss-Prot
Match: SAR1A_MOUSE (GTP-binding protein SAR1a OS=Mus musculus GN=Sar1a PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.499e-11 Identity = 27/41 (65.85%), Postives = 35/41 (85.37%), Query Frame = 1 Query: 7 TTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 129 TTGKG V L + N RP+EVFMCS++++ GYG+GF+WLSQYI Sbjct: 157 TTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLSQYI 197
BLAST of CX287303 vs. ExPASy Swiss-Prot
Match: SAR1A_HUMAN (GTP-binding protein SAR1a OS=Homo sapiens GN=SAR1A PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.499e-11 Identity = 27/41 (65.85%), Postives = 35/41 (85.37%), Query Frame = 1 Query: 7 TTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 129 TTGKG V L + N RP+EVFMCS++++ GYG+GF+WLSQYI Sbjct: 157 TTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLSQYI 197 The following BLAST results are available for this feature:
BLAST of CX287303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287303 ID=CX287303; Name=CX287303; organism=Citrus clementina; type=EST; length=418bpback to top |