CX287318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDHC_MAIZE (Malate dehydrogenase, cytoplasmic OS=Zea mays PE=2 SV=2) HSP 1 Score: 266.929 bits (681), Expect = 2.492e-71 Identity = 131/139 (94.24%), Postives = 136/139 (97.84%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 ELVDAAFPL+KGVVATTD VEACTGVN+AVMVGGFPRKEGMERKDVMSKNVSIYK+QASALE HAAPNCKVLVVANPANTNALILKEFAPSIP KN+TCLTRLDHNRALGQISE+LNVQVSDVKNVIIWGNHSSSQYPD Sbjct: 57 ELVDAAFPLLKGVVATTDVVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEAHAAPNCKVLVVANPANTNALILKEFAPSIPEKNVTCLTRLDHNRALGQISERLNVQVSDVKNVIIWGNHSSSQYPD 195
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDHC_MESCR (Malate dehydrogenase, cytoplasmic OS=Mesembryanthemum crystallinum GN=MDH PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 5.552e-71 Identity = 131/139 (94.24%), Postives = 136/139 (97.84%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 ELVDAAFPL+KGVVATTDA EAC GVN+AVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIP KNI+CLTRLDHNRALGQISE+LNVQVSDVKNVIIWGNHSS+QYPD Sbjct: 57 ELVDAAFPLLKGVVATTDAAEACKGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLNVQVSDVKNVIIWGNHSSTQYPD 195
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDHC_ORYSJ (Malate dehydrogenase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os10g0478200 PE=1 SV=3) HSP 1 Score: 264.233 bits (674), Expect = 1.615e-70 Identity = 129/139 (92.81%), Postives = 135/139 (97.12%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 ELVDAAFPL+KG+VATTD VEACTGVN+AVMVGGFPRKEGMERKDVMSKNVSIYK+QASALE HAAPNCKVLVVANPANTNALILKEFAPSIP KNITCLTRLDHNRALGQISEKLNVQV+DVKN IIWGNHSS+QYPD Sbjct: 57 ELVDAAFPLLKGIVATTDVVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEAHAAPNCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISEKLNVQVTDVKNAIIWGNHSSTQYPD 195
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDHC2_ARATH (Malate dehydrogenase, cytoplasmic 2 OS=Arabidopsis thaliana GN=At5g43330 PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 2.110e-70 Identity = 129/139 (92.81%), Postives = 137/139 (98.56%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 ELVDAAFPL+KGVVATTDAVEACTGVN+AVMVGGFPRKEGMERKDVMSKNVSIYK+QASALE+HAAPNCKVLVVANPANTNALILKEFAPSIP KNITCLTRLDHNRALGQ+SE+L+V VSDVKNVIIWGNHSS+QYPD Sbjct: 57 ELVDAAFPLLKGVVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQVSERLSVPVSDVKNVIIWGNHSSTQYPD 195
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDHC_MEDSA (Malate dehydrogenase, cytoplasmic OS=Medicago sativa GN=CMDH PE=2 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 1.047e-69 Identity = 129/139 (92.81%), Postives = 136/139 (97.84%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 ELVDAAFPL+KGVVATTD VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYK+QASALE+HAA NCKVLVVANPANTNALILKEFAPSIP +NI+CLTRLDHNRALGQISE+LNVQVSDVKNVIIWGNHSS+QYPD Sbjct: 57 ELVDAAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAANCKVLVVANPANTNALILKEFAPSIPERNISCLTRLDHNRALGQISERLNVQVSDVKNVIIWGNHSSTQYPD 195
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDHC1_ARATH (Malate dehydrogenase, cytoplasmic 1 OS=Arabidopsis thaliana GN=At1g04410 PE=1 SV=2) HSP 1 Score: 260.766 bits (665), Expect = 1.786e-69 Identity = 127/139 (91.37%), Postives = 136/139 (97.84%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL+DAAFPL+KGVVATTDAVE CTGVN+AVMVGGFPRKEGMERKDVMSKNVSIYK+QA+ALE+HAAPNCKVLVVANPANTNALILKEFAPSIP KNI+CLTRLDHNRALGQISE+L+V VSDVKNVIIWGNHSSSQYPD Sbjct: 57 ELIDAAFPLLKGVVATTDAVEGCTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQAAALEKHAAPNCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLSVPVSDVKNVIIWGNHSSSQYPD 195
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDHC_BETVU (Malate dehydrogenase, cytoplasmic OS=Beta vulgaris GN=NR1 PE=1 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 3.046e-69 Identity = 128/139 (92.09%), Postives = 133/139 (95.68%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 ELVDAAFPL+KGVVATTD EAC GVN+AVMVGGFPRKEGMERKDVM KNVSIYK+QASALEQ+AAPNCKVLVVANPANTNALILKEFAPSIP KNITCLTRLDHNRALGQISE+LN QVSDVKNVIIWGNHSSSQYPD Sbjct: 57 ELVDAAFPLLKGVVATTDVAEACKGVNVAVMVGGFPRKEGMERKDVMPKNVSIYKSQASALEQYAAPNCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISERLNAQVSDVKNVIIWGNHSSSQYPD 195
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDHC_XENTR (Malate dehydrogenase, cytoplasmic OS=Xenopus tropicalis GN=mdh1 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.575e-41 Identity = 81/139 (58.27%), Postives = 104/139 (74.82%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D A PL+K V+AT A +++A++VG PR+EGMERKD++ NV I+K+Q +AL +++ + KV+VV NPANTN L + APSIP +N +CLTRLDHNRA GQI+ KLNV DVKNVIIWGNHSS+QYPD Sbjct: 56 ELQDCALPLLKEVIATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALNKYSKKSVKVIVVGNPANTNCLTAMKSAPSIPKENFSCLTRLDHNRAKGQIALKLNVASDDVKNVIIWGNHSSTQYPD 194
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDHC_RAT (Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus GN=Mdh1 PE=1 SV=3) HSP 1 Score: 167.162 bits (422), Expect = 2.687e-41 Identity = 81/139 (58.27%), Postives = 103/139 (74.10%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D A PL++ V+AT A +++AV+VG PR+EGMERKD++ NV I+K+Q +ALE++A + KV+VV NPANTN L + APSIP +N +CLTRLDHNRA QI+ KL V DVKNVIIWGNHSS+QYPD Sbjct: 56 ELQDCALPLLQDVIATDKEEVAFKDLDVAVLVGSMPRREGMERKDLLKANVKIFKSQGAALEKYAKKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKSQIALKLGVTADDVKNVIIWGNHSSTQYPD 194
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDHC_HUMAN (Malate dehydrogenase, cytoplasmic OS=Homo sapiens GN=MDH1 PE=1 SV=4) HSP 1 Score: 167.162 bits (422), Expect = 2.687e-41 Identity = 80/139 (57.55%), Postives = 104/139 (74.82%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D A PL+K V+AT A +++A++VG PR+EGMERKD++ NV I+K+Q +AL+++A + KV+VV NPANTN L + APSIP +N +CLTRLDHNRA QI+ KL V +DVKNVIIWGNHSS+QYPD Sbjct: 56 ELQDCALPLLKDVIATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALDKYAKKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTANDVKNVIIWGNHSSTQYPD 194 The following BLAST results are available for this feature:
BLAST of CX287318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287318 ID=CX287318; Name=CX287318; organism=Citrus clementina; type=EST; length=440bpback to top |