CX287374

Overview
NameCX287374
Unique NameCX287374
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length405
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15350 contig Ccv1_Contig15350:2..406. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX287374 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.525e-19
Identity = 43/67 (64.18%), Postives = 52/67 (77.61%), Query Frame = 3 
Query:  204 KRGPPEAGGAWPVIGHLHLL-GRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHD 401
            + GPP   GAWP+IGHL LL G    H+ LGD+ADKYGPIF+I++G   A+VVSNWEMAKEC TT+D
Sbjct:   34 EEGPPTVAGAWPIIGHLPLLLGSKTPHKTLGDLADKYGPIFSIKIGAKNAVVVSNWEMAKECYTTND 100
[Close]
BLAST of CX287374 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.865e-17
Identity = 40/73 (54.79%), Postives = 53/73 (72.60%), Query Frame = 3 
Query:  186 YASNKKKRGPPEAGGAWPVIGHLHLL-GRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHD 401
            Y  N + +  P   GAWP++GHL LL G    H+VLG +ADKYGP+FTI++G+  ALV+SNWEM+KE  TT+D
Sbjct:   29 YRKNSRGKDAPVVSGAWPILGHLSLLNGSQTPHKVLGALADKYGPLFTIKLGMKPALVLSNWEMSKELFTTND 101
[Close]
BLAST of CX287374 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.062e-16
Identity = 41/77 (53.25%), Postives = 53/77 (68.83%), Query Frame = 3 
Query:  186 YASNKKKRGP----PEAGGAWPVIGHLHLL-GRFPLHRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHD 401
            Y   KK  G     P  GGAWP+ GHL LL G    H+ LG +A+K+GP+FTI++G  +ALVVS+WEMA+EC TT+D
Sbjct:   27 YGPLKKVHGSSKEAPTVGGAWPIFGHLPLLIGSKSPHKALGALAEKHGPLFTIKLGAKKALVVSDWEMARECFTTND 103
[Close]
BLAST of CX287374 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 5.078e-15
Identity = 35/64 (54.69%), Postives = 46/64 (71.88%), Query Frame = 3 
Query:  213 PPEAGGAWPVIGHLHLLGRFPL-HRVLGDMADKYGPIFTIRMGVHRALVVSNWEMAKECLTTHD 401
            PP   G+WP++GHL L+      H+ LG + DKYGPIFTI++G   ALV+SNWE+AKEC T +D
Sbjct:   35 PPIISGSWPLLGHLPLMRNTQTPHKTLGALVDKYGPIFTIKLGATNALVLSNWELAKECFTKND 98
The following BLAST results are available for this feature:
BLAST of CX287374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
C82A2_SOYBN1.525e-1964.18Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C82A3_SOYBN1.865e-1754.79Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]
C82A4_SOYBN2.062e-1653.25Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C82A1_PEA5.078e-1554.69Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
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Properties
Property NameValue
Genbank descriptionC01008H03SK Veg1 Citrus clementina cDNA clone C01008H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287374 ID=CX287374; Name=CX287374; organism=Citrus clementina; type=EST; length=405bp
CTCGTGCCGAATTCGGCACGAGGTATTTGTCTTGAATGTGCATGCATATT
ATATTAAGCTCAACCACTCAGGCTTAGAAGGAAGCAGCGGCGATGGCCTT
TTTTGCATCCCAAACAAGTGCTGTAGCTGCGATTTTAACCCTTATAATCT
TTCTATACACTTTGTTGTTGTTTGTTTCAAGAAATTACGCAAGCAATAAG
AAGAAGAGAGGACCTCCAGAAGCTGGTGGAGCATGGCCTGTGATTGGGCA
TCTACACCTCTTGGGAAGGTTCCCCCTTCACAGAGTGTTGGGAGACATGG
CTGACAAGTACGGACCAATCTTCACAATCAGGATGGGCGTACATCGCGCT
TTGGTGGTGAGCAATTGGGAGATGGCTAAAGAGTGTCTCACTACACATGA
CAGAG
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