CX287404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287404 vs. ExPASy Swiss-Prot
Match: PCNA_TOBAC (Proliferating cell nuclear antigen OS=Nicotiana tabacum GN=PCNA PE=2 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 4.437e-60 Identity = 115/123 (93.50%), Postives = 122/123 (99.19%), Query Frame = 1 Query: 16 AEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEDETKP 384 AEF+RICKDL+SIGDTVVISVTKEGVKFSTRGDIGTANIV RQNTTVDKPEEAT+IEM+EPVSLTFALRY+NSFT+ATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDE+ETKP Sbjct: 142 AEFSRICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANIVCRQNTTVDKPEEATVIEMNEPVSLTFALRYLNSFTKATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEEETKP 264
BLAST of CX287404 vs. ExPASy Swiss-Prot
Match: PCNA_SOYBN (Proliferating cell nuclear antigen (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 7.568e-60 Identity = 113/125 (90.40%), Postives = 124/125 (99.20%), Query Frame = 1 Query: 16 AEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEDETKPQV 390 +EFARICKDL+SIGDTVVISVTKEGVKFST+GDIGTANIV RQNT+VDKPEEAT+IEM+EPVSLTFALRYMNSFT+ATPLSNTVTISLS+ELPVVVEYKIAEMGY+RFYLAPKIEEDE++TKPQV Sbjct: 112 SEFARICKDLSSIGDTVVISVTKEGVKFSTKGDIGTANIVCRQNTSVDKPEEATVIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSNELPVVVEYKIAEMGYVRFYLAPKIEEDEEDTKPQV 236
BLAST of CX287404 vs. ExPASy Swiss-Prot
Match: PCNA1_DAUCA (Proliferating cell nuclear antigen OS=Daucus carota PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 2.876e-59 Identity = 114/123 (92.68%), Postives = 122/123 (99.19%), Query Frame = 1 Query: 16 AEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEDETKP 384 AEFARICKDL+SIGDTVVISVTKEGVKFSTRGDIGTANIV RQNTTVDKPEEAT+IEM+EPVSLTFALRYMNSFT+A+PLS+TVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEE+EDE+KP Sbjct: 142 AEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANIVCRQNTTVDKPEEATVIEMNEPVSLTFALRYMNSFTKASPLSSTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEEEDESKP 264
BLAST of CX287404 vs. ExPASy Swiss-Prot
Match: PCNA_CATRO (Proliferating cell nuclear antigen OS=Catharanthus roseus PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 2.692e-57 Identity = 111/120 (92.50%), Postives = 118/120 (98.33%), Query Frame = 1 Query: 16 AEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEDE 375 AEFARICKDL+SIGDTVVISVTKEGVKFSTRGDIGTANIV RQNTTVDKP+EATIIEM+EPVSLTFALRY+NSFT+ATPLSN VTISLSSELPVVVEYKIAEMGYIRFYLAPKIEED++E Sbjct: 142 AEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANIVCRQNTTVDKPDEATIIEMNEPVSLTFALRYLNSFTKATPLSNNVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDDEE 261
BLAST of CX287404 vs. ExPASy Swiss-Prot
Match: PCNA_POPNI (Proliferating cell nuclear antigen OS=Populus nigra GN=PCNA PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 3.515e-57 Identity = 109/120 (90.83%), Postives = 118/120 (98.33%), Query Frame = 1 Query: 16 AEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEDE 375 AEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPE+AT+IEM+EPVS+TFALRYMNSFT+ATPLSNTVTIS+S +LPVVVEYKIAEMGY+RFYLAPK+EEDE E Sbjct: 142 AEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEDATVIEMNEPVSMTFALRYMNSFTKATPLSNTVTISMSPDLPVVVEYKIAEMGYVRFYLAPKMEEDEPE 261
BLAST of CX287404 vs. ExPASy Swiss-Prot
Match: PCNA_PEA (Proliferating cell nuclear antigen OS=Pisum sativum GN=PCNA PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 3.515e-57 Identity = 108/124 (87.10%), Postives = 122/124 (98.39%), Query Frame = 1 Query: 16 AEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEDETKPQ 387 AEFARICKDL+SIGDTVVI+V+KEGVKFST+GDIG+ANIV RQNTTVDKPEEAT+IEM+EPV+L FALRYMNSFT+ATPLS++VTISLS+ELPVVVEYKIAEMGY+RFYLAPKIEEDE+ETKPQ Sbjct: 142 AEFARICKDLSSIGDTVVIAVSKEGVKFSTKGDIGSANIVCRQNTTVDKPEEATVIEMNEPVALQFALRYMNSFTKATPLSSSVTISLSNELPVVVEYKIAEMGYVRFYLAPKIEEDEEETKPQ 265
BLAST of CX287404 vs. ExPASy Swiss-Prot
Match: PCNA2_ARATH (Proliferating cell nuclear antigen 2 OS=Arabidopsis thaliana GN=At2g29570 PE=1 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 1.929e-55 Identity = 108/123 (87.80%), Postives = 119/123 (96.75%), Query Frame = 1 Query: 19 EFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEDETKPQ 387 EF+RICKDL+SIGDTVVISVTKEGVKFST GDIGTANIVLRQNTTVDKPE+A +IEM+EPVSL+FALRYMNSFT+ATPLS TVTISLSSELPVVVEYK+AEMGYIR+YLAPKIEE+ED TKP+ Sbjct: 143 EFSRICKDLSSIGDTVVISVTKEGVKFSTAGDIGTANIVLRQNTTVDKPEDAIVIEMNEPVSLSFALRYMNSFTKATPLSETVTISLSSELPVVVEYKVAEMGYIRYYLAPKIEEEED-TKPE 264
BLAST of CX287404 vs. ExPASy Swiss-Prot
Match: PCNA_BRANA (Proliferating cell nuclear antigen OS=Brassica napus PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 1.250e-54 Identity = 104/119 (87.39%), Postives = 117/119 (98.32%), Query Frame = 1 Query: 19 EFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEDE 375 EF+RICKDL++IGDTVVISVTKEGVKFST GDIGTANIVLRQNTTVDKPE+A +IEM+EPVSL+FALRYMNSFT+ATPLS+TVTISLSSELPVVVEYK+AEMGYIR+YLAPKIEEDE++ Sbjct: 143 EFSRICKDLSTIGDTVVISVTKEGVKFSTAGDIGTANIVLRQNTTVDKPEDAIVIEMNEPVSLSFALRYMNSFTKATPLSDTVTISLSSELPVVVEYKVAEMGYIRYYLAPKIEEDEED 261
BLAST of CX287404 vs. ExPASy Swiss-Prot
Match: PCNA1_ARATH (Proliferating cellular nuclear antigen 1 OS=Arabidopsis thaliana GN=PCNA PE=1 SV=2) HSP 1 Score: 211.46 bits (537), Expect = 1.633e-54 Identity = 105/118 (88.98%), Postives = 115/118 (97.46%), Query Frame = 1 Query: 19 EFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDED 372 EF+RICKDL+SIGDTVVISVTKEGVKFST GDIGTANIVLRQNTTVDKPE+A +IEM EPVSL+FALRYMNSFT+ATPLS+TVTISLSSELPVVVEYK+AEMGYIR+YLAPKIEE+ED Sbjct: 143 EFSRICKDLSSIGDTVVISVTKEGVKFSTAGDIGTANIVLRQNTTVDKPEDAIVIEMKEPVSLSFALRYMNSFTKATPLSDTVTISLSSELPVVVEYKVAEMGYIRYYLAPKIEEEED 260
BLAST of CX287404 vs. ExPASy Swiss-Prot
Match: PCNA2_DAUCA (Proliferating cell nuclear antigen large form OS=Daucus carota PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 6.205e-54 Identity = 105/119 (88.24%), Postives = 115/119 (96.64%), Query Frame = 1 Query: 16 AEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDED 372 AEFARICKDL++IGDTVVISVTKEGVKFSTRGDIGTANIV RQNT+VDKPE+ATIIEM E VSLTFALRYMNSFT+ATPL+N VTISLSSELPVVVEYKIAEMGYIR+YLAPKIEE+++ Sbjct: 142 AEFARICKDLSTIGDTVVISVTKEGVKFSTRGDIGTANIVCRQNTSVDKPEDATIIEMQETVSLTFALRYMNSFTKATPLANQVTISLSSELPVVVEYKIAEMGYIRYYLAPKIEEEDE 260 The following BLAST results are available for this feature:
BLAST of CX287404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287404 ID=CX287404; Name=CX287404; organism=Citrus clementina; type=EST; length=484bpback to top |