CX287530
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287530 vs. ExPASy Swiss-Prot
Match: YAB2_ARATH (Putative axial regulator YABBY 2 OS=Arabidopsis thaliana GN=YAB2 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.380e-20 Identity = 56/107 (52.34%), Postives = 73/107 (68.22%), Query Frame = 2 Query: 68 MSLDLASERVCYVHCNYCNTILAVSVPCSSLFNIVTVRCGHCANLLNVNMVSAL---QAVPL-QDPQLQKQHINLEDSIT-KDCGSSSKCNKFSSAFEIAEHETPRM 373 MS+D +SERVCYVHC++C TILAVSVP +SLF +VTVRCGHC NLL++N+ +L A P+ QD Q +QH +T KDC SSS+ ++ E + E PRM Sbjct: 1 MSVDFSSERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPIHQDLQPHRQHTT--SLVTRKDCASSSRST--NNLSENIDREAPRM 103
BLAST of CX287530 vs. ExPASy Swiss-Prot
Match: YAB2_ORYSJ (Protein YABBY 2 OS=Oryza sativa subsp. japonica GN=YAB2 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.409e-18 Identity = 45/100 (45.00%), Postives = 68/100 (68.00%), Query Frame = 2 Query: 83 ASERVCYVHCNYCNTILAVSVPCSSLFNIVTVRCGHCANLLNVNMVSALQAVPLQD---PQLQKQHINLEDSITKDCGSSSKCNKFSSAFEIAEHETPRM 373 A E VCYVHCN+CNTI AVSVP +S+ NIVTVRCGHC +LL+VN+ +QA+P +D L+ +++ ++ + + GSSS+ + F ++++T M Sbjct: 8 APEHVCYVHCNFCNTIFAVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLVQALPAEDHLQDNLKMHNMSFRENYS-EYGSSSRYGRVPMMF--SKNDTEHM 104
BLAST of CX287530 vs. ExPASy Swiss-Prot
Match: YAB6_ORYSJ (Protein YABBY 6 OS=Oryza sativa subsp. japonica GN=YAB6 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.435e-17 Identity = 45/81 (55.56%), Postives = 58/81 (71.60%), Query Frame = 2 Query: 68 MSLDLA-SERVCYVHCNYCNTILAVSVPCSSLFNIVTVRCGHCANLLNVNMVSALQAVP-LQDPQLQKQHINLEDSITKDC 304 MS +A +E+VCYVHCN+CNTILAVSVP +S+ NIVTVRCGHC NLL+VN+ + + P LQD H +L++S C Sbjct: 1 MSAQIAPAEQVCYVHCNFCNTILAVSVPGNSMLNIVTVRCGHCTNLLSVNLRGLMHSAPALQD----HHHHHLQESGLSGC 77
BLAST of CX287530 vs. ExPASy Swiss-Prot
Match: YAB5_ARATH (Axial regulator YABBY 5 OS=Arabidopsis thaliana GN=YAB5 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.435e-17 Identity = 41/80 (51.25%), Postives = 57/80 (71.25%), Query Frame = 2 Query: 80 LASERVCYVHCNYCNTILAVSVPCSSLFNIVTVRCGHCANLLNVNMVSALQAVPLQDPQLQKQHINLEDSITKDCGSSSK 319 +A+E++CY+ CN+CN ILAV+VPCSSLF+IVTVRCGHC NL +VNM +ALQ+ L + + + + GSSS+ Sbjct: 6 MATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQS-------LSRPNFQATNYAVPEYGSSSR 78
BLAST of CX287530 vs. ExPASy Swiss-Prot
Match: YAB4_ORYSJ (Protein YABBY 4 OS=Oryza sativa subsp. japonica GN=YAB4 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.692e-16 Identity = 38/59 (64.41%), Postives = 44/59 (74.58%), Query Frame = 2 Query: 86 SERVCYVHCNYCNTILAVSVPCSSLFNIVTVRCGHCANLLNVNMVSALQAVPLQDPQLQ 262 +E++CYVHCN C+TILAV VPCSSLF VTVRCGHCANLL+VN+ L P P Q Sbjct: 22 TEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAPAPAPANQ 80
BLAST of CX287530 vs. ExPASy Swiss-Prot
Match: YAB4_ORYSI (Protein YABBY 4 OS=Oryza sativa subsp. indica GN=YAB4 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.692e-16 Identity = 38/59 (64.41%), Postives = 44/59 (74.58%), Query Frame = 2 Query: 86 SERVCYVHCNYCNTILAVSVPCSSLFNIVTVRCGHCANLLNVNMVSALQAVPLQDPQLQ 262 +E++CYVHCN C+TILAV VPCSSLF VTVRCGHCANLL+VN+ L P P Q Sbjct: 22 TEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAPAPAPANQ 80
BLAST of CX287530 vs. ExPASy Swiss-Prot
Match: YAB5_ORYSJ (Protein YABBY 5 OS=Oryza sativa subsp. japonica GN=YAB5 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.834e-16 Identity = 34/43 (79.07%), Postives = 40/43 (93.02%), Query Frame = 2 Query: 89 ERVCYVHCNYCNTILAVSVPCSSLFNIVTVRCGHCANLLNVNM 217 E++CYVHCN+C+TILAV VPCSSLF VTVRCGHCANLL+VN+ Sbjct: 29 EQLCYVHCNFCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNL 71
BLAST of CX287530 vs. ExPASy Swiss-Prot
Match: YAB5_ORYSI (Protein YABBY 5 OS=Oryza sativa subsp. indica GN=YAB5 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 7.834e-16 Identity = 34/43 (79.07%), Postives = 40/43 (93.02%), Query Frame = 2 Query: 89 ERVCYVHCNYCNTILAVSVPCSSLFNIVTVRCGHCANLLNVNM 217 E++CYVHCN+C+TILAV VPCSSLF VTVRCGHCANLL+VN+ Sbjct: 29 EQLCYVHCNFCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNL 71
BLAST of CX287530 vs. ExPASy Swiss-Prot
Match: YAB1_ORYSJ (Protein YABBY 1 OS=Oryza sativa subsp. japonica GN=YAB1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.977e-15 Identity = 36/67 (53.73%), Postives = 49/67 (73.13%), Query Frame = 2 Query: 68 MSLDLASERVCYVHCNYCNTILAVSVPCSSLFNIVTVRCGHCANLLNVNMVSALQAVPLQDPQLQKQ 268 MS+ SE VCYV+CNYCNTIL V+VP + +NIVTVRCGHC +L++++ QA +QD Q+Q + Sbjct: 1 MSVQFTSEHVCYVNCNYCNTILVVNVPNNCSYNIVTVRCGHCTMVLSMDLAPFHQARTVQDHQVQNR 67
BLAST of CX287530 vs. ExPASy Swiss-Prot
Match: YAB3_ORYSJ (Protein YABBY 3 OS=Oryza sativa subsp. japonica GN=YAB3 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.299e-14 Identity = 32/47 (68.09%), Postives = 39/47 (82.98%), Query Frame = 2 Query: 77 DLASERVCYVHCNYCNTILAVSVPCSSLFNIVTVRCGHCANLLNVNM 217 D E++CYVHC+YC+T+L VSVP SSLF VTVRCGHC++LL VNM Sbjct: 54 DSEQEQLCYVHCHYCDTVLVVSVPSSSLFETVTVRCGHCSSLLTVNM 100 The following BLAST results are available for this feature:
BLAST of CX287530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287530 ID=CX287530; Name=CX287530; organism=Citrus clementina; type=EST; length=405bpback to top |