CX287553

Overview
NameCX287553
Unique NameCX287553
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length405
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX287553 vs. ExPASy Swiss-Prot
Match: 2A5G_ARATH (Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform OS=Arabidopsis thaliana GN=B'GAMMA PE=1 SV=2)

HSP 1 Score: 255.758 bits (652), Expect = 5.170e-68
Identity = 123/134 (91.79%), Postives = 129/134 (96.27%), Query Frame = 2 
Query:    2 EEEPLMDPAWPHLQIVYEFFLRFVASPETDAKLAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFFRFIFETEKHNGIAELLEVLGSIINGFALPLKEEHKLFLIRALIPLH 403
            +EEP ++PAWPHLQ+VYE  LRFVASP TDAKLAKRYIDHSFVLKLLDLFDSED REREYLKTILHRIYGKFMVHRPFIRKAINNIF+RFIFETEKHNGIAELLE+LGSIINGFALPLKEEHKLFLIRALIPLH
Sbjct:  178 DEEPALEPAWPHLQVVYELLLRFVASPMTDAKLAKRYIDHSFVLKLLDLFDSEDQREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIFETEKHNGIAELLEILGSIINGFALPLKEEHKLFLIRALIPLH 311
[Close]
BLAST of CX287553 vs. ExPASy Swiss-Prot
Match: 2A5Z_ARATH (Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' zeta isoform OS=Arabidopsis thaliana GN=B'ZETA PE=2 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 6.320e-66
Identity = 118/134 (88.06%), Postives = 128/134 (95.52%), Query Frame = 2 
Query:    2 EEEPLMDPAWPHLQIVYEFFLRFVASPETDAKLAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFFRFIFETEKHNGIAELLEVLGSIINGFALPLKEEHKLFLIRALIPLH 403
            +EEP ++PAWPH+Q+VYE  LRFVASP TDAKLAKRYIDHSFVLKLLDLFDSED REREYLKTILHR+YGKFMVHRP+IRKAINNIF+RFI ETEKHNGIAELLE+LGSIINGFALPLKEEHKLFL+RALIPLH
Sbjct:  199 DEEPSLEPAWPHVQVVYEILLRFVASPMTDAKLAKRYIDHSFVLKLLDLFDSEDQREREYLKTILHRVYGKFMVHRPYIRKAINNIFYRFISETEKHNGIAELLEILGSIINGFALPLKEEHKLFLLRALIPLH 332
[Close]
BLAST of CX287553 vs. ExPASy Swiss-Prot
Match: 2A5N_ARATH (Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform OS=Arabidopsis thaliana GN=B'ETA PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 6.988e-65
Identity = 116/134 (86.57%), Postives = 126/134 (94.03%), Query Frame = 2 
Query:    2 EEEPLMDPAWPHLQIVYEFFLRFVASPETDAKLAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFFRFIFETEKHNGIAELLEVLGSIINGFALPLKEEHKLFLIRALIPLH 403
            EEEP MD AWPHLQ+VYE FLRFVASPETD KLAKRYID SFVL+LLDLFDSEDPRER+ LKTILHRIYGKFMVHRPFIRK+INNIF+RF+FETEKHNGIAE LE+LGSIINGFALPLK+EHK+FL+R LIPLH
Sbjct:  190 EEEPSMDLAWPHLQLVYELFLRFVASPETDTKLAKRYIDQSFVLRLLDLFDSEDPRERDCLKTILHRIYGKFMVHRPFIRKSINNIFYRFVFETEKHNGIAEFLEILGSIINGFALPLKDEHKVFLVRVLIPLH 323
[Close]
BLAST of CX287553 vs. ExPASy Swiss-Prot
Match: 2A5B_ARATH (Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform OS=Arabidopsis thaliana GN=B'BETA PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 2.655e-64
Identity = 113/134 (84.33%), Postives = 126/134 (94.03%), Query Frame = 2 
Query:    2 EEEPLMDPAWPHLQIVYEFFLRFVASPETDAKLAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFFRFIFETEKHNGIAELLEVLGSIINGFALPLKEEHKLFLIRALIPLH 403
            EEEP ++P+WPHLQ+VYE  LR+V S +TD K+AKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIF+RFI+ETE+H+GI ELLE+LGSIINGFALP+KEEHKLFLIR LIPLH
Sbjct:  168 EEEPYLEPSWPHLQLVYELLLRYVVSTDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLIRVLIPLH 301
[Close]
BLAST of CX287553 vs. ExPASy Swiss-Prot
Match: 2A5T_ARATH (Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform OS=Arabidopsis thaliana GN=B'THETA PE=2 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 2.936e-63
Identity = 110/134 (82.09%), Postives = 124/134 (92.54%), Query Frame = 2 
Query:    2 EEEPLMDPAWPHLQIVYEFFLRFVASPETDAKLAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFFRFIFETEKHNGIAELLEVLGSIINGFALPLKEEHKLFLIRALIPLH 403
            EEEP MDP WPHLQ+VYE  LR +ASPETD KLAK+YID SFV +LLDLFDSEDPRER+ LKT+LHRIYGKFMVHRPFIRK+INNIF+RF+FETEKHNGIAE LE+LGSIINGFALPLK+EHK+FL+RAL+PLH
Sbjct:  169 EEEPSMDPTWPHLQLVYEILLRLIASPETDTKLAKKYIDQSFVSRLLDLFDSEDPRERDCLKTVLHRIYGKFMVHRPFIRKSINNIFYRFVFETEKHNGIAEFLEILGSIINGFALPLKDEHKVFLVRALVPLH 302
[Close]
BLAST of CX287553 vs. ExPASy Swiss-Prot
Match: 2A5A_ARATH (Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform OS=Arabidopsis thaliana GN=B'ALPHA PE=1 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 2.104e-61
Identity = 105/134 (78.36%), Postives = 126/134 (94.03%), Query Frame = 2 
Query:    2 EEEPLMDPAWPHLQIVYEFFLRFVASPETDAKLAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFFRFIFETEKHNGIAELLEVLGSIINGFALPLKEEHKLFLIRALIPLH 403
            EEEP ++P+WPHLQ++YE  LR++   +TD K+AKRYIDHSFVL+LL+LF++EDPREREYLKTILHRIYGKFMVHRPFIRKA+N+IF+RFI+ETE+H+GI ELLE+LGSIINGFALP+KEEHKLFLIRALIPLH
Sbjct:  168 EEEPYLEPSWPHLQLIYELLLRYIVPSDTDTKVAKRYIDHSFVLRLLELFETEDPREREYLKTILHRIYGKFMVHRPFIRKAMNHIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLIRALIPLH 301
[Close]
BLAST of CX287553 vs. ExPASy Swiss-Prot
Match: 2A5D_ARATH (Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B' delta isoform OS=Arabidopsis thaliana GN=B'DELTA PE=1 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 1.044e-60
Identity = 110/134 (82.09%), Postives = 121/134 (90.30%), Query Frame = 2 
Query:    2 EEEPLMDPAWPHLQIVYEFFLRFVASPETDAKLAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFFRFIFETEKHNGIAELLEVLGSIINGFALPLKEEHKLFLIRALIPLH 403
            EEE  ++P+WPHLQIVYEF LR VASP TD K++K+YIDH+FVLKLLDLFDSEDPREREYLKTILHRIYG+FMVHRPFIRK +NNI + FIFET KH+GIAE LEVLGSIINGFALPLKEEHKLFL R LIPLH
Sbjct:  157 EEEGSLNPSWPHLQIVYEFLLRIVASPNTDPKISKKYIDHTFVLKLLDLFDSEDPREREYLKTILHRIYGRFMVHRPFIRKTMNNILYDFIFETGKHSGIAEFLEVLGSIINGFALPLKEEHKLFLTRVLIPLH 290
[Close]
BLAST of CX287553 vs. ExPASy Swiss-Prot
Match: 2A5I_ARATH (Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform OS=Arabidopsis thaliana GN=B'IOTA PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 4.387e-59
Identity = 99/134 (73.88%), Postives = 124/134 (92.54%), Query Frame = 2 
Query:    2 EEEPLMDPAWPHLQIVYEFFLRFVASPETDAKLAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFFRFIFETEKHNGIAELLEVLGSIINGFALPLKEEHKLFLIRALIPLH 403
            ++EP+ DPAWPHLQIVY+  L+F+ SP  DAK+AK+Y+DH+F+++LLDLFDSEDPRERE LKTILHR+YGKFMVHRPF+RK+++NIF+RF+FETEKH+GIAELLE+ GSI++GFALPLKEEHK+FL R LIPLH
Sbjct:  163 DDEPMFDPAWPHLQIVYDLLLKFITSPCLDAKVAKKYLDHAFIVRLLDLFDSEDPRERECLKTILHRVYGKFMVHRPFVRKSMSNIFYRFVFETEKHSGIAELLEIFGSIVSGFALPLKEEHKIFLWRVLIPLH 296
[Close]
BLAST of CX287553 vs. ExPASy Swiss-Prot
Match: 2A5D_RABIT (Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform OS=Oryctolagus cuniculus GN=PPP2R5D PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 1.725e-55
Identity = 99/134 (73.88%), Postives = 118/134 (88.06%), Query Frame = 2 
Query:    2 EEEPLMDPAWPHLQIVYEFFLRFVASPETDAKLAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFFRFIFETEKHNGIAELLEVLGSIINGFALPLKEEHKLFLIRALIPLH 403
            E+EP ++ AWPHLQ+VYEFFLRF+ SP+    +AK+YID  FVL LLDLFDSEDPRER++LKTILHRIYGKF+  R +IR+ IN+IF+RFI+ETE HNGIAELLE+LGSIINGFALPLKEEHK+FLIR L+PLH
Sbjct:  182 EDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKMFLIRVLLPLH 315
[Close]
BLAST of CX287553 vs. ExPASy Swiss-Prot
Match: 2A5D_HUMAN (Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform OS=Homo sapiens GN=PPP2R5D PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 1.725e-55
Identity = 99/134 (73.88%), Postives = 118/134 (88.06%), Query Frame = 2 
Query:    2 EEEPLMDPAWPHLQIVYEFFLRFVASPETDAKLAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFFRFIFETEKHNGIAELLEVLGSIINGFALPLKEEHKLFLIRALIPLH 403
            E+EP ++ AWPHLQ+VYEFFLRF+ SP+    +AK+YID  FVL LLDLFDSEDPRER++LKTILHRIYGKF+  R +IR+ IN+IF+RFI+ETE HNGIAELLE+LGSIINGFALPLKEEHK+FLIR L+PLH
Sbjct:  198 EDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKMFLIRVLLPLH 331
The following BLAST results are available for this feature:
BLAST of CX287553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
2A5G_ARATH5.170e-6891.79Serine/threonine protein phosphatase 2A 59 kDa reg... [more]
2A5Z_ARATH6.320e-6688.06Serine/threonine protein phosphatase 2A 59 kDa reg... [more]
2A5N_ARATH6.988e-6586.57Serine/threonine protein phosphatase 2A 59 kDa reg... [more]
2A5B_ARATH2.655e-6484.33Serine/threonine protein phosphatase 2A 57 kDa reg... [more]
2A5T_ARATH2.936e-6382.09Serine/threonine protein phosphatase 2A 57 kDa reg... [more]
2A5A_ARATH2.104e-6178.36Serine/threonine protein phosphatase 2A 57 kDa reg... [more]
2A5D_ARATH1.044e-6082.09Serine/threonine protein phosphatase 2A 55 kDa reg... [more]
2A5I_ARATH4.387e-5973.88Serine/threonine protein phosphatase 2A 57 kDa reg... [more]
2A5D_RABIT1.725e-5573.88Serine/threonine-protein phosphatase 2A 56 kDa reg... [more]
2A5D_HUMAN1.725e-5573.88Serine/threonine-protein phosphatase 2A 56 kDa reg... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC01010G10SK Veg1 Citrus clementina cDNA clone C01010G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287553 ID=CX287553; Name=CX287553; organism=Citrus clementina; type=EST; length=405bp
AGAAGAAGAGCCTTTGATGGACCCTGCATGGCCTCATTTGCAAATTGTGT
ATGAATTCTTTCTGAGATTTGTTGCATCCCCTGAGACAGATGCAAAGTTG
GCTAAGCGGTACATTGATCACTCGTTTGTTCTCAAGTTGTTGGATCTCTT
TGATTCTGAGGATCCCAGGGAAAGGGAGTATCTCAAAACAATTCTACATC
GTATATATGGGAAGTTTATGGTGCACCGCCCATTTATTAGGAAAGCTATC
AACAATATCTTCTTCCGTTTTATATTTGAAACAGAGAAGCATAATGGGAT
TGCCGAGCTTTTAGAGGTTTTGGGCAGTATAATCAATGGTTTTGCTTTGC
CACTTAAAGAAGAACACAAATTGTTCCTTATAAGGGCTCTAATTCCACTA
CACAA
back to top