CX287566
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287566 vs. ExPASy Swiss-Prot
Match: ADS3_ARATH (Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic OS=Arabidopsis thaliana GN=ADS3 PE=2 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 1.238e-44 Identity = 82/116 (70.69%), Postives = 97/116 (83.62%), Query Frame = 2 Query: 284 YGRILLSDVLVKRRRSL-FSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQ 628 Y RI+LSDVLVK++ + + R W ++D VVL+MHLL+L APF F W ++ VAFGLY+VTGLLGITLSFHRNLSH++FKLPKWLEYLFAYCG Q+LQGNPIDWVSTHRYHHQ Sbjct: 75 YRRIMLSDVLVKKKEKVVWWEREWKAMDFGAVAVVLSMHLLSLLAPFQFNWRAVSVAFGLYIVTGLLGITLSFHRNLSHKAFKLPKWLEYLFAYCGAQALQGNPIDWVSTHRYHHQ 190
BLAST of CX287566 vs. ExPASy Swiss-Prot
Match: ADS1_ARATH (Delta-9 acyl-lipid desaturase 1 OS=Arabidopsis thaliana GN=ADS1 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.163e-32 Identity = 64/104 (61.54%), Postives = 81/104 (77.88%), Query Frame = 2 Query: 317 KRRRSLFSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQ 628 +++R+++ R W LDI A L +H L L APF FTW +LRVA +Y V GL GIT+S+HRNL+HRSFK+PKWLEY FAYCG+ ++QG+PIDWVSTHRYHHQ Sbjct: 24 RKKRAMWE-RKWKRLDIVKAFASLFVHFLCLLAPFNFTWPALRVALIVYTVGGL-GITVSYHRNLAHRSFKVPKWLEYFFAYCGLLAIQGDPIDWVSTHRYHHQ 125
BLAST of CX287566 vs. ExPASy Swiss-Prot
Match: ADS2_ARATH (Delta-9 acyl-lipid desaturase 2 OS=Arabidopsis thaliana GN=ADS2 PE=2 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 9.202e-32 Identity = 63/104 (60.58%), Postives = 76/104 (73.08%), Query Frame = 2 Query: 317 KRRRSLFSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQ 628 K+RR +F R W LD +H LAL APF FTWS+L V F Y + GL GIT+S+HRNL+HRSFK+PKWLEYL AYC + ++QG+PIDWVSTHRYHHQ Sbjct: 25 KKRRWVFWDRRWRRLDYVKFSASFTVHSLALLAPFYFTWSALWVTFLFYTIGGL-GITVSYHRNLAHRSFKVPKWLEYLLAYCALLAIQGDPIDWVSTHRYHHQ 127
BLAST of CX287566 vs. ExPASy Swiss-Prot
Match: ADS32_ARATH (Probable lipid desaturase ADS3.2, chloroplastic OS=Arabidopsis thaliana GN=ADS3.2 PE=2 SV=3) HSP 1 Score: 129.413 bits (324), Expect = 1.469e-29 Identity = 63/113 (55.75%), Postives = 80/113 (70.80%), Query Frame = 2 Query: 290 RILLSDVLVKRRRSLFSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQ 628 R LLS+V+V R + F R+W S D+S + + HLL+L APF F+W + V L + G+ ITLS+HRNLSHRSF LPKWLEYLFAY GV + QG+PI+WVS HRYHH+ Sbjct: 71 RRLLSEVVVVRTKRSFWERSWTSWDVSKLVIFVGTHLLSLLAPFYFSWEAFWVFPWLVFINGIC-ITLSYHRNLSHRSFDLPKWLEYLFAYGGVLAFQGDPIEWVSNHRYHHK 182
BLAST of CX287566 vs. ExPASy Swiss-Prot
Match: ADSL1_ARATH (Delta-9 desaturase-like 1 protein OS=Arabidopsis thaliana GN=At1g06090 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.619e-28 Identity = 59/105 (56.19%), Postives = 74/105 (70.48%), Query Frame = 2 Query: 314 VKRRRSLFSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQ 628 V+ + F R W +DI+ A V A+HLL L APF + W +LR L +VT L IT S+HRNL+H+SFKLPKWLEY FAY + +LQG+PIDWVSTHR+HHQ Sbjct: 16 VRGEKRAFFFRKWTRIDIARASAVGAVHLLCLLAPFNYKWEALRFGVILAIVTSL-SITFSYHRNLTHKSFKLPKWLEYPFAYSALFALQGHPIDWVSTHRFHHQ 119
BLAST of CX287566 vs. ExPASy Swiss-Prot
Match: ADSL3_ARATH (Delta-9 desaturase-like 3 protein OS=Arabidopsis thaliana GN=At1g06120 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.375e-27 Identity = 57/105 (54.29%), Postives = 73/105 (69.52%), Query Frame = 2 Query: 314 VKRRRSLFSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQ 628 V++ + F R W +D+ V A+HLL L APF +TW + R A + + T L IT S+HRNL+HRSFKLPKWLEY FAY + +LQG+PIDWVSTHR+HHQ Sbjct: 16 VRKEKRAFLFRKWTRVDVMRVSAVGAVHLLCLLAPFNYTWEAFRFAAMVGISTNL-SITFSYHRNLTHRSFKLPKWLEYPFAYSALFALQGHPIDWVSTHRFHHQ 119
BLAST of CX287566 vs. ExPASy Swiss-Prot
Match: ADSL4_ARATH (Delta-9 desaturase-like 4 protein OS=Arabidopsis thaliana GN=At1g06350 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 6.824e-27 Identity = 58/107 (54.21%), Postives = 74/107 (69.16%), Query Frame = 2 Query: 308 VLVKRRRSLFSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQ 628 V ++R+ F R W +D+ A VV+ +H L L APF F W +LR L+ +T L IT SFHRNLSHRSFK+PKWLEY +AY V +LQG+P+DWVS HR+HHQ Sbjct: 16 VSTMQKRAYFQ-RQWPLVDVVRASVVVIVHFLCLLAPFNFKWEALRFGLVLFALT-TLSITFSFHRNLSHRSFKIPKWLEYPWAYSAVFALQGDPMDWVSIHRFHHQ 120
BLAST of CX287566 vs. ExPASy Swiss-Prot
Match: ADSL5_ARATH (Delta-9 desaturase-like 5 protein OS=Arabidopsis thaliana GN=At1g06360 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.986e-26 Identity = 56/105 (53.33%), Postives = 71/105 (67.62%), Query Frame = 2 Query: 314 VKRRRSLFSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQ 628 V + + + R W+ DI A V+ +H L L APF + W +LR F LY +T L IT S+HRNL+HRSFKLPKWLEY AY V +LQG+P+DWVS HR+HHQ Sbjct: 16 VSKEKRPYIHREWSWADIIRALTVINVHFLCLLAPFNYKWEALRFGFVLYALTSL-SITFSYHRNLAHRSFKLPKWLEYPLAYFAVFALQGDPLDWVSIHRFHHQ 119
BLAST of CX287566 vs. ExPASy Swiss-Prot
Match: ADSL2_ARATH (Delta-9 desaturase-like 2 protein OS=Arabidopsis thaliana GN=At1g06100 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.423e-26 Identity = 53/105 (50.48%), Postives = 70/105 (66.67%), Query Frame = 2 Query: 314 VKRRRSLFSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQ 628 V++ + + R W D+ A V +HLL L APF + W + R L ++T L IT S+HRNL+HRSFKLPKWLEY FAY + +LQG+P+DWVS HR+HHQ Sbjct: 16 VRKEKRAYVLRKWTQFDVGRASTVGTVHLLCLLAPFNYKWEAFRFGIILAILTNLC-ITFSYHRNLTHRSFKLPKWLEYPFAYSALLALQGDPLDWVSIHRFHHQ 119 The following BLAST results are available for this feature:
BLAST of CX287566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287566 ID=CX287566; Name=CX287566; organism=Citrus clementina; type=EST; length=630bpback to top |