CX287581
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287581 vs. ExPASy Swiss-Prot
Match: PHYE_ARATH (Phytochrome E OS=Arabidopsis thaliana GN=PHYE PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.491e-19 Identity = 40/66 (60.61%), Postives = 54/66 (81.82%), Query Frame = -1 Query: 378 FRLTHPGEGIPSHLIEDMYNGRNQWTTPEGLGLKLSRKLLIMMNGRVRYVRENSKCYFVIDLELKT 575 FR+ HPG+G+PS ++ DM+ R+ W TP+GLGLKLSRKLL MNGRV YVRE+ +C+F +DL++KT Sbjct: 1031 FRMIHPGKGLPSEMLSDMFETRDGWVTPDGLGLKLSRKLLEQMNGRVSYVREDERCFFQVDLQVKT 1096
BLAST of CX287581 vs. ExPASy Swiss-Prot
Match: PHYE_IPONI (Phytochrome E OS=Ipomoea nil GN=PHYE PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.947e-19 Identity = 43/67 (64.18%), Postives = 53/67 (79.10%), Query Frame = -1 Query: 375 FRLTHPGEGIPSHLIEDMYNGRNQWTTPEGLGLKLSRKLLIMMNGRVRYVRENSKCYFVIDLELKTR 575 FR+THPG+G+PS LIEDM G +WTT EG+ L LS+KL+ MMNG V YVRE KCYF+IDL+ KT+ Sbjct: 1035 FRMTHPGQGLPSALIEDMVRGGTRWTTQEGVVLHLSQKLVRMMNGHVHYVREQQKCYFLIDLDFKTQ 1101
BLAST of CX287581 vs. ExPASy Swiss-Prot
Match: PHY_PINSY (Phytochrome OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.000e-15 Identity = 35/70 (50.00%), Postives = 54/70 (77.14%), Query Frame = -1 Query: 366 FRLTHPGEGIPSHLIEDMYNGRNQWTTPEGLGLKLSRKLLIMMNGRVRYVRENSKCYFVIDLELKTRGRQ 575 FR+THPG G+P+ L++D+++ R+QW T EG+GL + RKLL +MNG VRY+RE+ CYF++++E R+ Sbjct: 1057 FRITHPGLGLPAELVQDLFD-RSQWATQEGVGLSMCRKLLKLMNGDVRYIRESGICYFLVNVEFPMAQRE 1125
BLAST of CX287581 vs. ExPASy Swiss-Prot
Match: PHYB_SOYBN (Phytochrome B OS=Glycine max GN=PHYB PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.482e-15 Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = -1 Query: 369 FRLTHPGEGIPSHLIEDMYNGRNQWTTPEGLGLKLSRKLLIMMNGRVRYVRENSKCYFVIDLELKTRGR 575 FR+ PGEG+P LI+DM+N ++W T EGLGL +SRK+L +MNG V+Y+RE +CYF + LEL R Sbjct: 1084 FRMVCPGEGLPPELIQDMFNN-SRWGTQEGLGLSMSRKILKLMNGEVQYIREAERCYFYVLLELPVTRR 1151
BLAST of CX287581 vs. ExPASy Swiss-Prot
Match: PHYB_TOBAC (Phytochrome B OS=Nicotiana tabacum GN=PHYB PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 4.201e-14 Identity = 33/74 (44.59%), Postives = 54/74 (72.97%), Query Frame = -1 Query: 360 FRLTHPGEGIPSHLIEDMYNGRNQWTTPEGLGLKLSRKLLIMMNGRVRYVRENSKCYF--VIDLELKTRGRQKM 575 FR+ PGEG+P L++DM++ ++W T EGLGL + RK+L +MNG ++Y+RE+ +CYF ++DL + RG + + Sbjct: 1059 FRIVCPGEGLPPELVQDMFHS-SRWVTKEGLGLSMCRKILKLMNGDIQYIRESERCYFLIILDLPMTRRGSKSL 1131
BLAST of CX287581 vs. ExPASy Swiss-Prot
Match: PHYB_ARATH (Phytochrome B OS=Arabidopsis thaliana GN=PHYB PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.201e-14 Identity = 34/64 (53.12%), Postives = 50/64 (78.12%), Query Frame = -1 Query: 384 FRLTHPGEGIPSHLIEDMYNGRNQWTTPEGLGLKLSRKLLIMMNGRVRYVRENSKCYFVIDLEL 575 FR+ PGEG+P L+ DM++ ++WT+PEGLGL + RK+L +MNG V+Y+RE+ + YF+I LEL Sbjct: 1087 FRMACPGEGLPPELVRDMFHS-SRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILEL 1149
BLAST of CX287581 vs. ExPASy Swiss-Prot
Match: PHY2_CERPU (Phytochrome 2 OS=Ceratodon purpureus GN=PHY2 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.085e-13 Identity = 35/64 (54.69%), Postives = 50/64 (78.12%), Query Frame = -1 Query: 384 FRLTHPGEGIPSHLIEDMYNGRNQWTTPEGLGLKLSRKLLIMMNGRVRYVRENSKCYFVIDLEL 575 FR++HPG G+P L+ +MY+ R + T EGLGL + RKL+ +MNG V+YVREN++CYFV+ +EL Sbjct: 1047 FRVSHPGGGLPDELVLEMYD-RAKGMTQEGLGLNMCRKLVRLMNGDVQYVRENAQCYFVVYVEL 1109
BLAST of CX287581 vs. ExPASy Swiss-Prot
Match: PHYB_SOLTU (Phytochrome B OS=Solanum tuberosum GN=PHYB PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 2.723e-13 Identity = 31/63 (49.21%), Postives = 49/63 (77.78%), Query Frame = -1 Query: 384 RLTHPGEGIPSHLIEDMYNGRNQWTTPEGLGLKLSRKLLIMMNGRVRYVRENSKCYFVIDLEL 572 R+ PGEG+P L++DM++ ++W T EGLGL + RK+L +MNG ++Y+RE+ +CYF+I L+L Sbjct: 1058 RIICPGEGLPPELVQDMFHS-SRWVTQEGLGLSMCRKMLKLMNGEIQYIRESERCYFLIILDL 1119
BLAST of CX287581 vs. ExPASy Swiss-Prot
Match: PHYB1_SOLLC (Phytochrome B1 OS=Solanum lycopersicum GN=PHYB1 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.723e-13 Identity = 31/63 (49.21%), Postives = 49/63 (77.78%), Query Frame = -1 Query: 384 RLTHPGEGIPSHLIEDMYNGRNQWTTPEGLGLKLSRKLLIMMNGRVRYVRENSKCYFVIDLEL 572 R+ PGEG+P L++DM++ ++W T EGLGL + RK+L +MNG ++Y+RE+ +CYF+I L+L Sbjct: 1059 RIICPGEGLPPELVQDMFHS-SRWVTQEGLGLSMCRKMLKLMNGEIQYIRESERCYFMIILDL 1120
BLAST of CX287581 vs. ExPASy Swiss-Prot
Match: PHYB_SORBI (Phytochrome B OS=Sorghum bicolor GN=PHYB PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 6.067e-13 Identity = 31/64 (48.44%), Postives = 50/64 (78.12%), Query Frame = -1 Query: 384 FRLTHPGEGIPSHLIEDMYNGRNQWTTPEGLGLKLSRKLLIMMNGRVRYVRENSKCYFVIDLEL 575 FR T+PGEG+P+ +++DM++ +QW+T EG+GL RK+L +M G V+Y+RE+ + +F+I LEL Sbjct: 1104 FRFTYPGEGLPADIVQDMFSN-SQWSTQEGVGLSTCRKILKLMGGEVQYIRESERSFFLIVLEL 1166 The following BLAST results are available for this feature:
BLAST of CX287581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287581 ID=CX287581; Name=CX287581; organism=Citrus clementina; type=EST; length=575bpback to top |