CX287585

Overview
NameCX287585
Unique NameCX287585
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length509
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287585 vs. ExPASy Swiss-Prot
Match: CALS3_ARATH (Callose synthase 3 OS=Arabidopsis thaliana GN=CALS3 PE=2 SV=2)

HSP 1 Score: 291.967 bits (746), Expect = 1.072e-78
Identity = 139/168 (82.74%), Postives = 155/168 (92.26%), Query Frame = 1
Query:    4 STQPAIRDNKPLQVALASQSFVQIGFLMALPMMMEIVLERGFRNALSDFILMQLQLAAVFFTFSLGTKTHYYGRTLLHGGA*YRGTGRGFVVLHAKFAENYRLYSRSHFVKGIELMILLLVYHILGNSYIGVVAFLLITVSIWFMVATWLFAPFLFNPSGFEWQKIID 507
            STQ  IRDN PLQ+ALASQSFVQIGFLMALPM+MEI LERGFR ALS+F+LMQLQLA VFFTFSLGTKTHYYGRTLLHGGA YR TGRGFVV HAKFA+NYRLYSRSHFVKG+E+M+LL+VY I G++Y GV+A+LLIT+S+WFMV TWLFAPFLFNPSGFEWQKI+D
Sbjct: 1563 STQKGIRDNTPLQIALASQSFVQIGFLMALPMLMEIGLERGFRTALSEFVLMQLQLAPVFFTFSLGTKTHYYGRTLLHGGAKYRSTGRGFVVFHAKFADNYRLYSRSHFVKGLEMMLLLVVYQIFGSAYRGVLAYLLITISMWFMVGTWLFAPFLFNPSGFEWQKIVD 1730          
BLAST of CX287585 vs. ExPASy Swiss-Prot
Match: CALS1_ARATH (Callose synthase 1 OS=Arabidopsis thaliana GN=CALS1 PE=1 SV=2)

HSP 1 Score: 291.582 bits (745), Expect = 1.400e-78
Identity = 142/168 (84.52%), Postives = 151/168 (89.88%), Query Frame = 1
Query:    4 STQPAIRDNKPLQVALASQSFVQIGFLMALPMMMEIVLERGFRNALSDFILMQLQLAAVFFTFSLGTKTHYYGRTLLHGGA*YRGTGRGFVVLHAKFAENYRLYSRSHFVKGIELMILLLVYHILGNSYIGVVAFLLITVSIWFMVATWLFAPFLFNPSGFEWQKIID 507
            S+Q A R+NKPL+ ALASQSFVQIGFLMALPMMMEI LERGF NAL +F+LMQLQLA+VFFTF LGTKTHYYGRTL HGGA YRGTGRGFVV HAKFAENYR YSRSHFVKGIELMILLLVY I G SY GVV ++LITVSIWFMV TWLFAPFLFNPSGFEWQKI+D
Sbjct: 1548 SSQRAFRNNKPLEAALASQSFVQIGFLMALPMMMEIGLERGFHNALIEFVLMQLQLASVFFTFQLGTKTHYYGRTLFHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKGIELMILLLVYQIFGQSYRGVVTYILITVSIWFMVVTWLFAPFLFNPSGFEWQKIVD 1715          
BLAST of CX287585 vs. ExPASy Swiss-Prot
Match: CALS2_ARATH (Callose synthase 2 OS=Arabidopsis thaliana GN=CALS2 PE=2 SV=2)

HSP 1 Score: 290.812 bits (743), Expect = 2.388e-78
Identity = 142/168 (84.52%), Postives = 149/168 (88.69%), Query Frame = 1
Query:    4 STQPAIRDNKPLQVALASQSFVQIGFLMALPMMMEIVLERGFRNALSDFILMQLQLAAVFFTFSLGTKTHYYGRTLLHGGA*YRGTGRGFVVLHAKFAENYRLYSRSHFVKGIELMILLLVYHILGNSYIGVVAFLLITVSIWFMVATWLFAPFLFNPSGFEWQKIID 507
            S Q A R N PLQ ALASQSFVQIGFLMALPMMMEI LERGF NAL DF+LMQLQLA+VFFTF LGTKTHYYGRTL HGGA YRGTGRGFVV HAKFAENYR YSRSHFVKGIELMILLLVY I G++Y GVV ++LITVSIWFMV TWLFAPFLFNPSGFEWQKI+D
Sbjct: 1549 SNQKAFRSNMPLQAALASQSFVQIGFLMALPMMMEIGLERGFHNALIDFVLMQLQLASVFFTFQLGTKTHYYGRTLFHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKGIELMILLLVYQIFGHAYRGVVTYILITVSIWFMVVTWLFAPFLFNPSGFEWQKIVD 1716          
BLAST of CX287585 vs. ExPASy Swiss-Prot
Match: CALS7_ARATH (Callose synthase 7 OS=Arabidopsis thaliana GN=CALS7 PE=2 SV=2)

HSP 1 Score: 243.817 bits (621), Expect = 3.347e-64
Identity = 112/164 (68.29%), Postives = 137/164 (83.54%), Query Frame = 1
Query:   16 AIRDNKPLQVALASQSFVQIGFLMALPMMMEIVLERGFRNALSDFILMQLQLAAVFFTFSLGTKTHYYGRTLLHGGA*YRGTGRGFVVLHAKFAENYRLYSRSHFVKGIELMILLLVYHILGNSYIGVVAFLLITVSIWFMVATWLFAPFLFNPSGFEWQKIID 507
            ++ ++  L+ ALA+QS  Q+GFLM LPM+MEI LE+GFR AL DFI+MQLQLA+VFFTF LGTK HY+GRT+LHGG+ YR TGRGFVV HAKFAENYRLYSRSHFVKG+EL+ILL+VY + G SY     ++ IT S+WF+V +WLFAPF+FNPSGFEWQK +D
Sbjct: 1537 SVHESNALEQALAAQSVFQLGFLMVLPMVMEIGLEKGFRTALGDFIIMQLQLASVFFTFQLGTKAHYFGRTILHGGSKYRATGRGFVVFHAKFAENYRLYSRSHFVKGLELVILLVVYQVYGTSYRSSSTYMYITFSMWFLVTSWLFAPFIFNPSGFEWQKTVD 1700          
BLAST of CX287585 vs. ExPASy Swiss-Prot
Match: CALS4_ARATH (Callose synthase 4 OS=Arabidopsis thaliana GN=CALS4 PE=2 SV=2)

HSP 1 Score: 243.817 bits (621), Expect = 3.347e-64
Identity = 122/162 (75.31%), Postives = 136/162 (83.95%), Query Frame = 1
Query:   28 NKPL--QVALASQSFVQIGFLMALPMMMEIVLERGFRNALSDFILMQLQLAAVFFTFSLGTKTHYYGRTLLHGGA*YRGTGRGFVVLHAKFAENYRLYSRSHFVKGIELMILLLVYHILGNSYIGVVAFLLITVSIWFMVATWLFAPFLFNPSGFEWQKIID 507
            NKP+  ++ LASQSFVQI FLMA+PM+MEI LERGF +AL DF+LMQLQLA+VFFTF LGTK HYY +TLLHGGA YRGTGRGFVV HAKFAENYR YSRSHFVK  EL ILLLVYHI G +YIG     L T+SIWFMV TWLFAPFLFNPSGFEW +I++
Sbjct: 1479 NKPMMMEIILASQSFVQIVFLMAMPMIMEIGLERGFYDALFDFVLMQLQLASVFFTFQLGTKFHYYCKTLLHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKATELGILLLVYHIFGPTYIG-----LFTISIWFMVGTWLFAPFLFNPSGFEWHEIVE 1635          
BLAST of CX287585 vs. ExPASy Swiss-Prot
Match: CALS6_ARATH (Putative callose synthase 6 OS=Arabidopsis thaliana GN=CALS6 PE=3 SV=2)

HSP 1 Score: 243.047 bits (619), Expect = 5.710e-64
Identity = 114/157 (72.61%), Postives = 135/157 (85.99%), Query Frame = 1
Query:   37 LQVALASQSFVQIGFLMALPMMMEIVLERGFRNALSDFILMQLQLAAVFFTFSLGTKTHYYGRTLLHGGA*YRGTGRGFVVLHAKFAENYRLYSRSHFVKGIELMILLLVYHILGNSYIGVVAFLLITVSIWFMVATWLFAPFLFNPSGFEWQKIID 507
            L+ ALA+QS  Q+GFLM LPM+MEI LE GFR+A+ DF +MQLQLA+VFFTF LGTK+HYYGRT+LHGG+ YR TGRGFVV HAKFAENYRLYSRSHFVKG+EL++LL+VY I G+SY     +L ITVS+WFMV +WLFAPF+FNPSGFEWQK +D
Sbjct: 1532 LEQALATQSIFQLGFLMVLPMVMEIGLEHGFRSAIVDFFIMQLQLASVFFTFQLGTKSHYYGRTILHGGSKYRPTGRGFVVFHAKFAENYRLYSRSHFVKGLELLLLLVVYQIYGHSYRSSNLYLYITVSMWFMVGSWLFAPFIFNPSGFEWQKTVD 1688          
BLAST of CX287585 vs. ExPASy Swiss-Prot
Match: CALS5_ARATH (Callose synthase 5 OS=Arabidopsis thaliana GN=CALS5 PE=1 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 3.133e-62
Identity = 113/164 (68.90%), Postives = 132/164 (80.49%), Query Frame = 1
Query:   16 AIRDNKPLQVALASQSFVQIGFLMALPMMMEIVLERGFRNALSDFILMQLQLAAVFFTFSLGTKTHYYGRTLLHGGA*YRGTGRGFVVLHAKFAENYRLYSRSHFVKGIELMILLLVYHILGNSYIGVVAFLLITVSIWFMVATWLFAPFLFNPSGFEWQKIID 507
            A + +  L+ A+ASQS VQ+G LM LPM+MEI LERGFR ALSD I+MQLQLA VFFTFSLGTK HYYGRT+LHGG+ YR TGRGFVV H KFAENYR+YSRSHFVKG+ELM+LL+ Y I G +    V + L+  S WF+V +WLFAPF FNPSGFEWQKI+D
Sbjct: 1527 AAKGDSSLKAAMASQSVVQLGLLMTLPMVMEIGLERGFRTALSDLIIMQLQLAPVFFTFSLGTKVHYYGRTILHGGSKYRATGRGFVVKHEKFAENYRMYSRSHFVKGMELMVLLICYRIYGKAAEDSVGYALVMGSTWFLVGSWLFAPFFFNPSGFEWQKIVD 1690          
BLAST of CX287585 vs. ExPASy Swiss-Prot
Match: CALS8_ARATH (Putative callose synthase 8 OS=Arabidopsis thaliana GN=CALS8 PE=3 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 3.035e-57
Identity = 107/162 (66.05%), Postives = 128/162 (79.01%), Query Frame = 1
Query:   19 IRDNKPLQVALASQSFVQIGFLMALPMMMEIVLERGFRNALSDFILMQLQLAAVFFTFSLGTKTHYYGRTLLHGGA*YRGTGRGFVVLHAKFAENYRLYSRSHFVKGIELMILLLVYHILGNSYIGVVAFLLITVSIWFMVATWLFAPFLFNPSGFEWQKII 504
            +++ K L+ ALASQSF+Q+G L  LPM+MEI LE+GF  A  DFILMQLQLAA FFTFSLGTKTHY+GRT+LHGGA YR TGR  VV HA F+ENYRLYSRSHF+KG ELMILL+VY +  ++    +A+  IT S+WFM  TWL APFLFNPSGF W+ I+
Sbjct: 1586 VKNIKSLETALASQSFIQLGLLTGLPMVMEIGLEKGFLIAFQDFILMQLQLAAFFFTFSLGTKTHYFGRTILHGGAKYRPTGRKVVVFHANFSENYRLYSRSHFIKGFELMILLVVYELFKHTSQSNMAYSFITFSVWFMSFTWLCAPFLFNPSGFTWEIIV 1747          
BLAST of CX287585 vs. ExPASy Swiss-Prot
Match: CALS9_ARATH (Callose synthase 9 OS=Arabidopsis thaliana GN=CALS9 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 8.264e-55
Identity = 96/161 (59.63%), Postives = 125/161 (77.64%), Query Frame = 1
Query:   25 DNKPLQVALASQSFVQIGFLMALPMMMEIVLERGFRNALSDFILMQLQLAAVFFTFSLGTKTHYYGRTLLHGGA*YRGTGRGFVVLHAKFAENYRLYSRSHFVKGIELMILLLVYHILGNSYIGVVAFLLITVSIWFMVATWLFAPFLFNPSGFEWQKIID 507
            D+  L  AL +Q   QIG   A+PM++  +LE+GF  A+  FI MQ QL  VFFTFSLGT+THY+GRT+LHGGA Y+ TGRGFVV H KF+ENYRLYSRSHFVK +E+++LL+VY   GN   G V+++L+TVS WF+  +WLFAP+LFNP+GFEWQK+++
Sbjct: 1544 DDTALSAALNAQFLFQIGVFTAVPMVLGFILEQGFLQAIVSFITMQFQLCTVFFTFSLGTRTHYFGRTILHGGARYQATGRGFVVKHIKFSENYRLYSRSHFVKAMEVILLLVVYLAYGNDEAGAVSYILLTVSSWFLAVSWLFAPYLFNPAGFEWQKVVE 1704          
BLAST of CX287585 vs. ExPASy Swiss-Prot
Match: CALSA_ARATH (Callose synthase 10 OS=Arabidopsis thaliana GN=CALS10 PE=2 SV=4)

HSP 1 Score: 206.838 bits (525), Expect = 4.535e-53
Identity = 96/160 (60.00%), Postives = 121/160 (75.62%), Query Frame = 1
Query:   28 NKPLQVALASQSFVQIGFLMALPMMMEIVLERGFRNALSDFILMQLQLAAVFFTFSLGTKTHYYGRTLLHGGA*YRGTGRGFVVLHAKFAENYRLYSRSHFVKGIELMILLLVYHILGNSYIGVVAFLLITVSIWFMVATWLFAPFLFNPSGFEWQKIID 507
            N  L  AL +Q  VQIG   A+PM+M  +LE G   A+  FI MQ QL +VFFTFSLGT+THY+GRT+LHGGA YR TGRGFVV H KFA+NYRLYSRSHFVK  E+ +LL++Y   G +  G  +F+L+T+S WF+V +WLFAP++FNPSGFEWQK ++
Sbjct: 1543 NTALDAALNAQFLVQIGIFTAVPMVMGFILELGLLKAIFSFITMQFQLCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVQHIKFADNYRLYSRSHFVKAFEVALLLIIYIAYGYTDGGASSFVLLTISSWFLVISWLFAPYIFNPSGFEWQKTVE 1702          
The following BLAST results are available for this feature:
BLAST of CX287585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
CALS3_ARATH1.072e-7882.74Callose synthase 3 OS=Arabidopsis thaliana GN=CALS... [more]
CALS1_ARATH1.400e-7884.52Callose synthase 1 OS=Arabidopsis thaliana GN=CALS... [more]
CALS2_ARATH2.388e-7884.52Callose synthase 2 OS=Arabidopsis thaliana GN=CALS... [more]
CALS7_ARATH3.347e-6468.29Callose synthase 7 OS=Arabidopsis thaliana GN=CALS... [more]
CALS4_ARATH3.347e-6475.31Callose synthase 4 OS=Arabidopsis thaliana GN=CALS... [more]
CALS6_ARATH5.710e-6472.61Putative callose synthase 6 OS=Arabidopsis thalian... [more]
CALS5_ARATH3.133e-6268.90Callose synthase 5 OS=Arabidopsis thaliana GN=CALS... [more]
CALS8_ARATH3.035e-5766.05Putative callose synthase 8 OS=Arabidopsis thalian... [more]
CALS9_ARATH8.264e-5559.63Callose synthase 9 OS=Arabidopsis thaliana GN=CALS... [more]
CALSA_ARATH4.535e-5360.00Callose synthase 10 OS=Arabidopsis thaliana GN=CAL... [more]

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Properties
Property NameValue
Genbank descriptionC01011B08SK Veg1 Citrus clementina cDNA clone C01011B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287585 ID=CX287585; Name=CX287585; organism=Citrus clementina; type=EST; length=509bp
GGGAGTACCCAACCAGCTATAAGAGACAATAAGCCTCTTCAAGTAGCTCT
TGCTTCACAGTCTTTTGTGCAAATTGGATTTTTAATGGCCTTACCTATGA
TGATGGAAATTGTGTTAGAAAGGGGCTTCCGCAATGCGTTAAGTGATTTC
ATATTGATGCAATTACAACTTGCTGCAGTATTTTTCACATTTTCTCTAGG
TACAAAAACTCACTATTATGGGAGGACATTGCTCCATGGCGGCGCATAAT
ATAGAGGTACAGGCCGTGGCTTTGTAGTGCTCCACGCCAAGTTTGCTGAA
AATTATCGGCTTTACTCCCGCAGCCACTTTGTCAAAGGAATAGAACTGAT
GATTCTACTTCTTGTGTACCATATACTGGGTAATTCATATATAGGCGTAG
TTGCATTTTTGCTGATCACTGTATCAATCTGGTTCATGGTGGCGACTTGG
TTGTTTGCTCCTTTCCTCTTCAACCCATCAGGCTTTGAGTGGCAGAAGAT
TATTGATGA
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