CX287592

Overview
NameCX287592
Unique NameCX287592
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length419
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX287592 vs. ExPASy Swiss-Prot
Match: METB_ARATH (Cystathionine gamma-synthase, chloroplastic OS=Arabidopsis thaliana GN=CGS1 PE=2 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 2.312e-12
Identity = 39/64 (60.94%), Postives = 44/64 (68.75%), Query Frame = 2 
Query:  119 DPDFSGS--ARFDKPRISAARVIGASTASFSGLSSLIFRFPPNFVRQLSTKARRNCSNIGVAQI 304
            DPD  GS      + R+ A+  I +S    +GLSS I RFPPNFVRQLS KARRNCSNIGVAQI
Sbjct:   25 DPDLVGSPVGGSSRRRVHASAGISSSFTGDAGLSSRILRFPPNFVRQLSIKARRNCSNIGVAQI 88
The following BLAST results are available for this feature:
BLAST of CX287592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
METB_ARATH2.312e-1260.94Cystathionine gamma-synthase, chloroplastic OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionC01011C03SK Veg1 Citrus clementina cDNA clone C01011C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287592 ID=CX287592; Name=CX287592; organism=Citrus clementina; type=EST; length=419bp
AGAATACAGAGAGAGCAAAGCCGCCGTTCAATACGACGTCGTAATGGCCG
TGTCCTCATGTTCGAGTCAAAAAATTTTGTCCTTCTCTTCTTCTTGTTCG
TCTTTTGAGTGCCGTTCCGATCCCGACTTCTCGGGCTCGGCTCGGTTTGA
TAAACCGAGGATCTCGGCGGCGCGAGTCATCGGAGCGTCGACGGCGTCGT
TTAGCGGCCTGTCGTCTCTGATTTTCAGGTTTCCGCCGAACTTCGTGCGC
CAGCTTAGCACGAAGGCCAGGAGGAACTGCAGCAACATCGGCGTGGCGCA
AATCGGGGCGGCTTCGTGGTCGAACGGTGTGGTTTCCGGCTCTAACTCGG
CGGCGGCTGCAGCAGCTTCCGCTGCCCCCGCCCCGACCGTCCCCGTCGAG
ATTACTAGCGGCGATGACA
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