CX287606

Overview
NameCX287606
Unique NameCX287606
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length592
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A_TOBAC (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.094e-68
Identity = 127/132 (96.21%), Postives = 130/132 (98.48%), Query Frame = 2
Query:  200 VPSN-SHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            VPS+ SHGNLDEQIAQLMQCKPLSEQEVR LCEKAKEILM+ESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLV+LKVRYPQRITILRGNHESRQITQVYGFYDE
Sbjct:    4 VPSSASHGNLDEQIAQLMQCKPLSEQEVRGLCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDE 135          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A3_ARATH (Serine/threonine-protein phosphatase PP2A-3 catalytic subunit OS=Arabidopsis thaliana GN=PP2A3 PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 3.893e-66
Identity = 120/131 (91.60%), Postives = 127/131 (96.95%), Query Frame = 2
Query:  200 VPSNSHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +P+++  +LDEQI+QLMQCKPLSEQ+VR LCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLV LKVRYPQRITILRGNHESRQITQVYGFYDE
Sbjct:    6 LPTDATLDLDEQISQLMQCKPLSEQQVRALCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVGLKVRYPQRITILRGNHESRQITQVYGFYDE 136          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A_BRANA (Serine/threonine-protein phosphatase PP2A catalytic subunit (Fragment) OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 249.21 bits (635), Expect = 1.133e-65
Identity = 119/131 (90.84%), Postives = 126/131 (96.18%), Query Frame = 2
Query:  200 VPSNSHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +P+++  +LDEQI+QLMQCKPLSEQ+VR LCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGG CPDTNYLFMGDYVDRGYYSVETVTLLV LKVRYPQRITILRGNHESRQITQVYGFYDE
Sbjct:    2 IPTDATLDLDEQISQLMQCKPLSEQQVRALCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGMCPDTNYLFMGDYVDRGYYSVETVTLLVGLKVRYPQRITILRGNHESRQITQVYGFYDE 132          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A4_ARATH (Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Arabidopsis thaliana GN=PP2A4 PE=2 SV=2)

HSP 1 Score: 248.44 bits (633), Expect = 1.932e-65
Identity = 118/131 (90.08%), Postives = 127/131 (96.95%), Query Frame = 2
Query:  200 VPSNSHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +P+++  +LDEQI+QLMQCKPLSEQ+VR LCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGG CPDTNYLFMGDYVDRGYYSVETVTLLV+LK+RYPQRITILRGNHESRQITQVYGFYDE
Sbjct:    6 IPTDATIDLDEQISQLMQCKPLSEQQVRALCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGMCPDTNYLFMGDYVDRGYYSVETVTLLVALKMRYPQRITILRGNHESRQITQVYGFYDE 136          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A2_ORYSJ (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A2 PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 3.295e-65
Identity = 118/129 (91.47%), Postives = 123/129 (95.35%), Query Frame = 2
Query:  206 SNSHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            S+ HG LD+QI +LMQCKPL E EVR LCEKAKEILM+ESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLV+LKVRYPQRITILRGNHESRQITQVYGFYDE
Sbjct:    2 SSPHGGLDDQIERLMQCKPLPEPEVRALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDE 130          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A2_ORYSI (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A2 PE=2 SV=2)

HSP 1 Score: 247.669 bits (631), Expect = 3.295e-65
Identity = 118/129 (91.47%), Postives = 123/129 (95.35%), Query Frame = 2
Query:  206 SNSHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            S+ HG LD+QI +LMQCKPL E EVR LCEKAKEILM+ESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLV+LKVRYPQRITILRGNHESRQITQVYGFYDE
Sbjct:    2 SSPHGGLDDQIERLMQCKPLPEPEVRALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDE 130          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A5_TOBAC (Serine/threonine-protein phosphatase PP2A-5 catalytic subunit OS=Nicotiana tabacum GN=NPP5 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 9.588e-65
Identity = 117/131 (89.31%), Postives = 125/131 (95.42%), Query Frame = 2
Query:  200 VPSNSHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            V ++  GNLDEQI+QLMQCKPLSE +VR LCEKAKEIL +ESNVQPVKSPVTICGDIHGQFHDLAELFRIGG+CPDTNYLFMGDYVDRGYYSVETVTLLV+LKVRYPQR+TILRGNHESRQITQVYGFYDE
Sbjct:    7 VAASIQGNLDEQISQLMQCKPLSEPDVRALCEKAKEILAEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGQCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRLTILRGNHESRQITQVYGFYDE 137          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A_MEDSA (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Medicago sativa GN=PP2A PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 1.635e-64
Identity = 117/124 (94.35%), Postives = 123/124 (99.19%), Query Frame = 2
Query:  221 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            +L+EQI+QLMQCKPLSEQ+V+ LCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLV+LKVRYPQRITILRGNHESRQITQVYGFYDE
Sbjct:   13 DLNEQISQLMQCKPLSEQQVKELCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDE 136          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A4_ORYSJ (Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A4 PE=2 SV=2)

HSP 1 Score: 240.35 bits (612), Expect = 5.261e-63
Identity = 114/125 (91.20%), Postives = 119/125 (95.20%), Query Frame = 2
Query:  218 GNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            G LD QI QLM+C+PLSE EV+ LCEKAKEILM+ESNVQPVKSPVTICGDIHGQFHDL ELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLV+LKVRYPQRITILRGNHESRQITQVYGFYDE
Sbjct:   13 GGLDAQIEQLMECRPLSEPEVKTLCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLVELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDE 137          
BLAST of CX287606 vs. ExPASy Swiss-Prot
Match: PP2A4_ORYSI (Putative serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A4 PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 5.261e-63
Identity = 114/125 (91.20%), Postives = 119/125 (95.20%), Query Frame = 2
Query:  218 GNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 592
            G LD QI QLM+C+PLSE EV+ LCEKAKEILM+ESNVQPVKSPVTICGDIHGQFHDL ELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLV+LKVRYPQRITILRGNHESRQITQVYGFYDE
Sbjct:   14 GGLDAQIEQLMECRPLSETEVKTLCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLVELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDE 138          
The following BLAST results are available for this feature:
BLAST of CX287606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
PP2A_TOBAC1.094e-6896.21Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A3_ARATH3.893e-6691.60Serine/threonine-protein phosphatase PP2A-3 cataly... [more]
PP2A_BRANA1.133e-6590.84Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A4_ARATH1.932e-6590.08Serine/threonine-protein phosphatase PP2A-4 cataly... [more]
PP2A2_ORYSJ3.295e-6591.47Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP2A2_ORYSI3.295e-6591.47Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP2A5_TOBAC9.588e-6589.31Serine/threonine-protein phosphatase PP2A-5 cataly... [more]
PP2A_MEDSA1.635e-6494.35Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A4_ORYSJ5.261e-6391.20Serine/threonine-protein phosphatase PP2A-4 cataly... [more]
PP2A4_ORYSI5.261e-6391.20Putative serine/threonine-protein phosphatase PP2A... [more]

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Properties
Property NameValue
Genbank descriptionC01011D05SK Veg1 Citrus clementina cDNA clone C01011D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287606 ID=CX287606; Name=CX287606; organism=Citrus clementina; type=EST; length=592bp
AATCACTGAAGCCTTCTCTCTTTTTTTTTTAAAATTTTTTTTGTTGAGAT
ACAAAATTGAATTTTGATTATAGGGTTTCGAAAAAATTAGGGTTTGTTTG
TTGAAATTTAGGGTTAGGGTTAGATTAAAAAGAGGAAAGTGAAGGGATCT
GAGTCTGCAAATTAAGAAGAAGAAGGACAAGAAAATGAGCTTGGATTCGG
TCCCTTCAAATTCACATGGAAATCTCGACGAGCAGATTGCTCAGCTTATG
CAGTGCAAGCCCTTATCGGAACAAGAGGTTAGAGTGTTATGCGAAAAGGC
CAAGGAGATATTGATGGATGAAAGTAATGTCCAGCCTGTAAAAAGTCCTG
TTACAATTTGTGGTGATATTCATGGACAATTTCATGATCTTGCAGAGCTT
TTCCGCATTGGAGGAAAGTGTCCAGATACAAACTACTTGTTCATGGGAGA
TTATGTTGACCGTGGTTACTATTCAGTAGAAACTGTTACGCTATTGGTAT
CTCTGAAAGTGCGTTATCCTCAAAGGATTACTATTCTAAGGGGGAATCAT
GAAAGTCGTCAGATTACTCAGGTCTATGGATTCTATGATGAG
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