CX287607
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287607 vs. ExPASy Swiss-Prot
Match: ATB13_ARATH (Homeobox-leucine zipper protein ATHB-13 OS=Arabidopsis thaliana GN=ATHB-13 PE=2 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 1.346e-40 Identity = 88/121 (72.73%), Postives = 100/121 (82.64%), Query Frame = 3 Query: 198 MSCN-GMAFFPTNFMLQTPHEDEH--QTPTSLNPILPSCA-PQDFHGVASFLGKRSM--SFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 542 MSCN GM+FFP+NFM+QT +ED+H Q+P SL P+LPSC+ PQD HG ASFLGKRS ++ G NGE+D+SDDGSQ GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG Sbjct: 1 MSCNNGMSFFPSNFMIQTSYEDDHPHQSP-SLAPLLPSCSLPQDLHGFASFLGKRSPMEGCCDLETGNNMNGEEDYSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 120
BLAST of CX287607 vs. ExPASy Swiss-Prot
Match: HOX21_ORYSI (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. indica GN=HOX21 PE=2 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 3.439e-28 Identity = 81/159 (50.94%), Postives = 90/159 (56.60%), Query Frame = 3 Query: 198 MSCNGMA-----FFPTNFMLQT----------PHEDEHQ----------------------TPTSLNPILPSCAP----QDFHGVASFLGKRSMSFS-GIDAGEEANG--EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 542 M+ NGMA FFP NF+L P E H P NP LPS A Q+F G+A LGKR MS+ G G+E NG ED+ SDDGSQAGEKKRRLN+EQV+TLEKNFELGNKLEPERKMQLARALG Sbjct: 1 MASNGMASSPSSFFPPNFLLHMAQQQAAPPHDPQEHHHHHHHGHHHEQQQHHHHLGPPPPPPPHPHNPFLPSSAQCPSLQEFRGMAPMLGKRPMSYGDGGGGGDEVNGGGEDELSDDGSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARALG 159
BLAST of CX287607 vs. ExPASy Swiss-Prot
Match: HOX21_ORYSJ (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. japonica GN=HOX21 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.707e-27 Identity = 81/165 (49.09%), Postives = 91/165 (55.15%), Query Frame = 3 Query: 198 MSCNGMA-----FFPTNFMLQTP-------------------------HEDEHQT-------------PTSLNPILPSCAP----QDFHGVASFLGKRSMSFS-GIDAGEEANG--EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 542 M+ NGMA FFP NF+L HE + Q P NP LPS A Q+F G+A LGKR MS+ G G+E NG ED+ SDDGSQAGEKKRRLN+EQV+TLEKNFELGNKLEPERKMQLARALG Sbjct: 1 MASNGMASSPSSFFPPNFLLHMAQQQAAPPHDPQEHHHHHHHGHHGHHHEQQQQQQHHHHLGPPPPPPPHPHNPFLPSSAQCPSLQEFRGMAPMLGKRPMSYGDGGGGGDEVNGGGEDELSDDGSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARALG 165
BLAST of CX287607 vs. ExPASy Swiss-Prot
Match: ATB23_ARATH (Homeobox-leucine zipper protein ATHB-23 OS=Arabidopsis thaliana GN=ATHB-23 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.445e-26 Identity = 68/122 (55.74%), Postives = 82/122 (67.21%), Query Frame = 3 Query: 198 MSCN--GMAFFPTNFMLQTPHEDEHQTPTSLNPILPSCAPQDFHGVASFLGKRS-----MSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 542 MSCN G+AFFP NF LQ H++E P L QDFHG FLGKRS F +D NG++++SDDGS+ GEKKRRLNMEQ+K LEK+FELGNKLE +RK++LARALG Sbjct: 1 MSCNNNGLAFFPENFSLQNHHQEEEDHPQLL---------QDFHG---FLGKRSPMNNVQGFCNLDM----NGDEEYSDDGSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLELARALG 106
BLAST of CX287607 vs. ExPASy Swiss-Prot
Match: HAT7_ARATH (Homeobox-leucine zipper protein HAT7 OS=Arabidopsis thaliana GN=HAT7 PE=2 SV=4) HSP 1 Score: 102.064 bits (253), Expect = 1.828e-21 Identity = 63/131 (48.09%), Postives = 80/131 (61.07%), Query Frame = 3 Query: 213 MAFFPTNFMLQTPHEDE-HQTPTSLNPILPSCAPQDFHGVA-SFLGKRSMSFSGI-----------------DAGEEANGEDDFSDDGSQA--GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 542 MAF FM Q HED H P+ + LPSC P F+G +++ RSMSF+G+ + ++ ED+ SDDGS GEKK+RLN+EQV+ LEK+FELGNKLEPERKMQLA+ALG Sbjct: 22 MAFPQHGFMFQQLHEDNAHHLPSPTS--LPSCPPHLFYGGGGNYMMNRSMSFTGVSDHHHLTQKSPTTTNNMNDQDQVGEEDNLSDDGSHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALG 150
BLAST of CX287607 vs. ExPASy Swiss-Prot
Match: ATB20_ARATH (Homeobox-leucine zipper protein ATHB-20 OS=Arabidopsis thaliana GN=ATHB-20 PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.185e-20 Identity = 57/113 (50.44%), Postives = 70/113 (61.95%), Query Frame = 3 Query: 213 MAFFPTNFMLQTPHEDEHQTPTSLNPILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEAN-GEDDFSDDGSQA--GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 542 MAF FM Q HED Q LPSC P F+G +++ RSMS + E++ SDDG+ GEKK+RL +EQVK LEK+FELGNKLEPERK+QLA+ALG Sbjct: 16 MAFPQHGFMFQQLHEDNSQDQ------LPSCPPHLFNGGGNYMMNRSMSLMNVQEDHNQTLDEENLSDDGAHTMLGEKKKRLQLEQVKALEKSFELGNKLEPERKIQLAKALG 122
BLAST of CX287607 vs. ExPASy Swiss-Prot
Match: HOX23_ORYSJ (Homeobox-leucine zipper protein HOX23 OS=Oryza sativa subsp. japonica GN=HOX23 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.403e-13 Identity = 59/146 (40.41%), Postives = 70/146 (47.95%), Query Frame = 3 Query: 198 MSCNGMA------FFPTNFMLQTP--------HEDEHQ------------TPTSLNPILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDD-----GSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 542 M+ NG A FFP NF+LQ H +H P SL+P LP A D + SG D G +D D G GEKKRRL++EQV+TLE++FE GNKLEPERK QLARALG Sbjct: 1 MASNGAAAGAMAPFFPPNFLLQMQQPLPLHHQHLQDHAHGGHGGHHLLPPPPPSLSPFLPDLA-MDAPPPPMY------EASGGDGGGGGAASEDEEDGCGGGGGGGGGEKKRRLSVEQVRTLERSFESGNKLEPERKAQLARALG 139
BLAST of CX287607 vs. ExPASy Swiss-Prot
Match: HOX23_ORYSI (Homeobox-leucine zipper protein HOX23 OS=Oryza sativa subsp. indica GN=HOX23 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.403e-13 Identity = 59/146 (40.41%), Postives = 70/146 (47.95%), Query Frame = 3 Query: 198 MSCNGMA------FFPTNFMLQTP--------HEDEHQ------------TPTSLNPILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDD-----GSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 542 M+ NG A FFP NF+LQ H +H P SL+P LP A D + SG D G +D D G GEKKRRL++EQV+TLE++FE GNKLEPERK QLARALG Sbjct: 1 MASNGAAAGAMAPFFPPNFLLQMQQPLPLHHQHLQDHAHGGHGGHHLLPPPPPSLSPFLPDLA-MDAPPPPMY------EASGGDGGGGGAASEDEEDGCGGGGGGGGGEKKRRLSVEQVRTLERSFESGNKLEPERKAQLARALG 139 The following BLAST results are available for this feature:
BLAST of CX287607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287607 ID=CX287607; Name=CX287607; organism=Citrus clementina; type=EST; length=544bpback to top |