CX287609

Overview
NameCX287609
Unique NameCX287609
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length510
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDC21_MEDSA (Cell division control protein 2 homolog 1 (Fragment) OS=Medicago sativa GN=CDC2A PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 2.065e-61
Identity = 106/125 (84.80%), Postives = 119/125 (95.20%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP 375
            RAPEILLGSRHYSTPVDVWSVGCIFAEM N+RPL PGDSEIDELFKIFR+LGTPNEDTWPGVTSLPDFKS FP+WPSK+L TVV NLEPAG+DLL+ MLC+DP++RITARSA+EHEYF+D++FVP
Sbjct:  167 RAPEILLGSRHYSTPVDVWSVGCIFAEMANRRPLSPGDSEIDELFKIFRILGTPNEDTWPGVTSLPDFKSTFPRWPSKDLATVVPNLEPAGLDLLNSMLCLDPTKRITARSAVEHEYFKDIKFVP 291          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDC2_CHERU (Cell division control protein 2 homolog OS=Chenopodium rubrum GN=CDC2 PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 2.697e-61
Identity = 108/125 (86.40%), Postives = 119/125 (95.20%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP 375
            RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQ+PLFPGDSEIDELFKIFR LGTPNE+TWPGVTSLPDFKS+FPKW SK+L  VV NL+PAGIDLL+KMLC+DPS+RITAR+ALEHEYF+D+ FVP
Sbjct:  170 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRTLGTPNEETWPGVTSLPDFKSSFPKWISKDLSAVVPNLDPAGIDLLNKMLCLDPSKRITARNALEHEYFKDIGFVP 294          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDC2A_ANTMA (Cell division control protein 2 homolog A OS=Antirrhinum majus GN=CDC2A PE=2 SV=2)

HSP 1 Score: 229.95 bits (585), Expect = 5.086e-60
Identity = 106/125 (84.80%), Postives = 118/125 (94.40%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP 375
            RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRV+GTPNE+TWPGVTSLPDFKSAFPKWP+KEL  VV NL+ +G+DLL KML +DPS+RITAR+AL+HEYF+D+ FVP
Sbjct:  170 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVMGTPNEETWPGVTSLPDFKSAFPKWPAKELAAVVPNLDASGLDLLDKMLRLDPSKRITARNALQHEYFKDIGFVP 294          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDC2_VIGAC (Cell division control protein 2 homolog OS=Vigna aconitifolia GN=CDC2 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 6.642e-60
Identity = 104/125 (83.20%), Postives = 118/125 (94.40%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP 375
            RAPEILLGSRHYSTPVDVWSVGCIFAEMVN+RPLFPGDSEIDELFKIFR+LGTPNE+TWPGVT+LPDFKS FPKWP K+L TVV NL+ AG++LLS MLC+DPS+RITAR A+EHEYF+D++FVP
Sbjct:  170 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNRRPLFPGDSEIDELFKIFRILGTPNEETWPGVTALPDFKSTFPKWPPKDLATVVPNLDAAGLNLLSSMLCLDPSKRITARIAVEHEYFKDIKFVP 294          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDC22_MEDSA (Cell division control protein 2 homolog 2 OS=Medicago sativa GN=CDC2B PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 8.675e-60
Identity = 105/125 (84.00%), Postives = 116/125 (92.80%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP 375
            RAPEILLGSRHYSTPVDVWSVGCIFAEM+NQRPLFPGDSEIDELFKIFR+ GTPNE+TWPGVTSLPDFKSAFPKWP+K+L T V NLEPAG+DLLS    +DP+RRITAR ALEHEYF+D++FVP
Sbjct:  170 RAPEILLGSRHYSTPVDVWSVGCIFAEMINQRPLFPGDSEIDELFKIFRITGTPNEETWPGVTSLPDFKSAFPKWPAKDLATQVPNLEPAGLDLLSSTCRLDPTRRITARGALEHEYFKDIKFVP 294          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDC2_VIGUN (Cell division control protein 2 homolog OS=Vigna unguiculata GN=CDC2 PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 3.645e-58
Identity = 101/125 (80.80%), Postives = 117/125 (93.60%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP 375
            RAPEILLGSRHYSTPVDVWSVGC+FAEMVN+RPLFPGDSEIDELFKIFR+LGTPNE+TWPGVT+LPDFKS FPKWP K+L T+V NL+ AG++LLS ML +DPS+RITAR A+EHEYF+D++FVP
Sbjct:  170 RAPEILLGSRHYSTPVDVWSVGCLFAEMVNRRPLFPGDSEIDELFKIFRILGTPNEETWPGVTALPDFKSTFPKWPPKDLATMVPNLDAAGLNLLSSMLSLDPSKRITARIAVEHEYFKDIKFVP 294          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDC2B_ANTMA (Cell division control protein 2 homolog B (Fragment) OS=Antirrhinum majus GN=CDC2B PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 9.925e-56
Identity = 98/121 (80.99%), Postives = 110/121 (90.91%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDV 363
            RAPE+LLGSRHYSTPVDVWSVGCIFAEMVNQ+PLFPGDSEIDEL KIFR++GTPNED WPGVTSLPDFKS+FPKWP KEL T+V NL   G+DLL KML +DPS+RITA+ ALEHEYF+D+
Sbjct:  157 RAPEVLLGSRHYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELHKIFRIIGTPNEDIWPGVTSLPDFKSSFPKWPPKELATIVPNLGATGLDLLCKMLQLDPSKRITAKKALEHEYFKDI 277          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDKA1_ORYSJ (Cyclin-dependent kinase A-1 OS=Oryza sativa subsp. japonica GN=CDKA-1 PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 4.926e-55
Identity = 98/124 (79.03%), Postives = 114/124 (91.94%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFV 372
            RAPEILLGSR YSTPVD+WSVGCIFAEMVNQ+PLFPGDSEIDELFKIFRVLGTPNE +WPGV+SLPD+KSAFPKW +++L T+V  L+PAG+DLLSKML  +P++RITAR ALEHEYF+D+E V
Sbjct:  170 RAPEILLGSRQYSTPVDMWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRVLGTPNEQSWPGVSSLPDYKSAFPKWQAQDLATIVPTLDPAGLDLLSKMLRYEPNKRITARQALEHEYFKDLEMV 293          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDC2_MAIZE (Cell division control protein 2 homolog OS=Zea mays GN=CDC2 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 4.926e-55
Identity = 98/124 (79.03%), Postives = 114/124 (91.94%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFV 372
            RAPEILLG+R YSTPVDVWSVGCIFAEMVNQ+PLFPGDSEIDELFKIFR+LGTPNE +WPGV+ LPDFK+AFP+W +++L TVV NL+PAG+DLLSKML  +PS+RITAR ALEHEYF+D+E V
Sbjct:  170 RAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEQSWPGVSCLPDFKTAFPRWQAQDLATVVPNLDPAGLDLLSKMLRYEPSKRITARQALEHEYFKDLEVV 293          
BLAST of CX287609 vs. ExPASy Swiss-Prot
Match: CDKA2_ORYSJ (Cyclin-dependent kinase A-2 OS=Oryza sativa subsp. japonica GN=CDKA-2 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 9.290e-54
Identity = 95/122 (77.87%), Postives = 111/122 (90.98%), Query Frame = 1
Query:    1 RAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKELGTVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVE 366
            RAPEILLG+RHYSTPVD+WSVGCIFAEMVNQ+PLFPGDSEIDELFKIF ++GTPNE+TWPGV SLPD+ S FPKWPS +L TVV  L+ +G+DLLSKML +DPS+RI AR+ALEHEYF+D+E
Sbjct:  169 RAPEILLGARHYSTPVDMWSVGCIFAEMVNQKPLFPGDSEIDELFKIFSIMGTPNEETWPGVASLPDYISTFPKWPSVDLATVVPTLDSSGLDLLSKMLRLDPSKRINARAALEHEYFKDLE 290          
The following BLAST results are available for this feature:
BLAST of CX287609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC21_MEDSA2.065e-6184.80Cell division control protein 2 homolog 1 (Fragmen... [more]
CDC2_CHERU2.697e-6186.40Cell division control protein 2 homolog OS=Chenopo... [more]
CDC2A_ANTMA5.086e-6084.80Cell division control protein 2 homolog A OS=Antir... [more]
CDC2_VIGAC6.642e-6083.20Cell division control protein 2 homolog OS=Vigna a... [more]
CDC22_MEDSA8.675e-6084.00Cell division control protein 2 homolog 2 OS=Medic... [more]
CDC2_VIGUN3.645e-5880.80Cell division control protein 2 homolog OS=Vigna u... [more]
CDC2B_ANTMA9.925e-5680.99Cell division control protein 2 homolog B (Fragmen... [more]
CDKA1_ORYSJ4.926e-5579.03Cyclin-dependent kinase A-1 OS=Oryza sativa subsp.... [more]
CDC2_MAIZE4.926e-5579.03Cell division control protein 2 homolog OS=Zea may... [more]
CDKA2_ORYSJ9.290e-5477.87Cyclin-dependent kinase A-2 OS=Oryza sativa subsp.... [more]

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Properties
Property NameValue
Genbank descriptionC01011D08SK Veg1 Citrus clementina cDNA clone C01011D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287609 ID=CX287609; Name=CX287609; organism=Citrus clementina; type=EST; length=510bp
AGAGCACCTGAAATATTACTAGGATCTCGCCATTACTCTACTCCAGTTGA
TGTGTGGTCGGTGGGATGTATATTTGCTGAGATGGTGAACCAGCGGCCAT
TGTTTCCAGGAGACTCTGAGATTGATGAGTTATTCAAGATCTTCAGAGTC
TTGGGAACACCTAATGAGGACACATGGCCTGGAGTGACTTCATTGCCTGA
CTTTAAATCTGCCTTTCCTAAATGGCCTTCTAAGGAGTTGGGGACTGTTG
TTCGAAATCTTGAGCCAGCTGGCATTGATCTCCTTTCTAAAATGCTCTGC
ATGGATCCAAGCAGAAGAATTACTGCCAGAAGTGCTCTAGAACATGAATA
CTTCAGGGACGTCGAATTTGTACCCTAATATCTGTTGTATATGCTATTAG
AGTGTTGACATTATTGTGAAGCCTTTGGTTTTGATTGTTTGCGAAATTTG
CCGACTGTCTTTACTTGCAGTTTTACTGAAAAGTCTTACTACATGGAATG
GCTTTTTACA
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