CX287617

Overview
NameCX287617
Unique NameCX287617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length426
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287617 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 4.257e-62
Identity = 106/138 (76.81%), Postives = 126/138 (91.30%), Query Frame = 3
Query:   12 RTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 425
            +TPLDW++RVKI L  A+G+AH+H+ GGPKF+HGNIK+SNV++ Q+ D CISDFGLTPLM VP  P R AGYRAPEV+ETRKH+HKSDVYSFGVL+LEMLTGK+P+QSP+RDDMVDLPRWVQSVVREEWT+EVFD+EL
Sbjct:  451 KTPLDWDSRVKITLSAAKGIAHLHAAGGPKFSHGNIKSSNVIMKQESDACISDFGLTPLMAVPIAPMRGAGYRAPEVMETRKHTHKSDVYSFGVLILEMLTGKSPVQSPSRDDMVDLPRWVQSVVREEWTSEVFDIEL 588          
BLAST of CX287617 vs. ExPASy Swiss-Prot
Match: Y3868_ARATH (Probable inactive receptor kinase At3g08680 OS=Arabidopsis thaliana GN=At3g08680 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 4.133e-49
Identity = 94/140 (67.14%), Postives = 111/140 (79.29%), Query Frame = 3
Query:    9 GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT-PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 425
            GR  LDWETR++I L  ARG++HIHS  G K  HGNIK+ NVL+ Q+L  C+SDFG+ PLM+     PSRS GYRAPE IETRKH+ KSDVYSFGVLLLEMLTGKA  ++   +++VDLP+WVQSVVREEWT EVFDVEL
Sbjct:  433 GRAALDWETRLRICLEAARGISHIHSASGAKLLHGNIKSPNVLLTQELHVCVSDFGIAPLMSHHTLIPSRSLGYRAPEAIETRKHTQKSDVYSFGVLLLEMLTGKAAGKTTGHEEVVDLPKWVQSVVREEWTGEVFDVEL 572          
BLAST of CX287617 vs. ExPASy Swiss-Prot
Match: Y4374_ARATH (Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 2.772e-45
Identity = 85/139 (61.15%), Postives = 107/139 (76.98%), Query Frame = 3
Query:   12 RTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATP-SRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 425
            R PLDWETR+KI +G A+G+A IH     K  HGNIK+SN+ +N + +GC+SD GLT +M+  A P SR AGYRAPEV +TRK S  SDVYSFGV+LLE+LTGK+P+ +   D+++ L RWV SVVREEWTAEVFD+EL
Sbjct:  429 RIPLDWETRMKIAIGAAKGIARIHKENNGKLVHGNIKSSNIFLNSESNGCVSDLGLTAVMSPLAPPISRQAGYRAPEVTDTRKSSQLSDVYSFGVVLLELLTGKSPIHTTAGDEIIHLVRWVHSVVREEWTAEVFDIEL 567          
BLAST of CX287617 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 6.176e-45
Identity = 86/139 (61.87%), Postives = 109/139 (78.42%), Query Frame = 3
Query:    9 GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 425
            GRTPLDW+ R++I +  ARG+AH+H     K  HGNIKASN+L++ + D C+SD+GL  L +  + P+R AGY APEV+ETRK + KSDVYSFGVLLLE+LTGK+P Q+   ++ +DLPRWV SVVREEWTAEVFDVEL
Sbjct:  442 GRTPLDWDNRMRIAITAARGLAHLHVSA--KLVHGNIKASNILLHPNQDTCVSDYGLNQLFSNSSPPNRLAGYHAPEVLETRKVTFKSDVYSFGVLLLELLTGKSPNQASLGEEGIDLPRWVLSVVREEWTAEVFDVEL 578          
BLAST of CX287617 vs. ExPASy Swiss-Prot
Match: Y5516_ARATH (Probable receptor kinase At5g05160 OS=Arabidopsis thaliana GN=At5g05160 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.165e-43
Identity = 84/143 (58.74%), Postives = 110/143 (76.92%), Query Frame = 3
Query:    6 RGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD---MVDLPRWVQSVVREEWTAEVFDVEL 425
            RG   +DWETR+KI  GT++ ++++HS+   KF HG+IK+SN+L+ +DL+ C+SD  L  L N+P    R+ GY APEVIETR+ S +SDVYSFGV++LEMLTGK PL  P  +D   ++DLPRWV+SVVREEWTAEVFDVEL
Sbjct:  436 RGDRGVDWETRMKIATGTSKAISYLHSL---KFVHGDIKSSNILLTEDLEPCLSDTSLVTLFNLPTHTPRTIGYNAPEVIETRRVSQRSDVYSFGVVILEMLTGKTPLTQPGLEDERVVIDLPRWVRSVVREEWTAEVFDVEL 575          
BLAST of CX287617 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.282e-38
Identity = 76/140 (54.29%), Postives = 103/140 (73.57%), Query Frame = 3
Query:    9 GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT-PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 425
            GR+PL+W+ R +I +G ARG+ ++HS G    +HGNIK+SN+L+ +  D  +SDFGL  L+   AT P+R+ GYRAPEV + ++ S K DVYSFGV+LLE++TGKAP  S   ++ VDLPRWV+SV R+EW  EVFD EL
Sbjct:  462 GRSPLNWDVRSRIAIGAARGLDYLHSQG-TSTSHGNIKSSNILLTKSHDAKVSDFGLAQLVGSSATNPNRATGYRAPEVTDPKRVSQKGDVYSFGVVLLELITGKAPSNSVMNEEGVDLPRWVKSVARDEWRREVFDSEL 600          
BLAST of CX287617 vs. ExPASy Swiss-Prot
Match: Y5168_ARATH (Probably inactive receptor-like protein kinase At5g41680 OS=Arabidopsis thaliana GN=At5g41680 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 7.312e-38
Identity = 75/139 (53.96%), Postives = 99/139 (71.22%), Query Frame = 3
Query:   12 RTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM-NVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 425
            + PLDWE+R++I +G ARG+A IH     KF HGNIK+SN+  N    GCI D GLT +  ++P T  RS+GY APE+ +TRK +  SDVYSFGV+LLE+LTGK+P    + D+ +DL  W++SVV +EWT EVFD EL
Sbjct:  174 QVPLDWESRLRIAIGAARGLAIIHEADDGKFVHGNIKSSNIFTNSKCYGCICDLGLTHITKSLPQTTLRSSGYHAPEITDTRKSTQFSDVYSFGVVLLELLTGKSPASPLSLDENMDLASWIRSVVSKEWTGEVFDNEL 312          
BLAST of CX287617 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.779e-37
Identity = 71/139 (51.08%), Postives = 101/139 (72.66%), Query Frame = 3
Query:    9 GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 425
            GRTPL+WETR  I LG AR ++++HS  G   +HGNIK+SN+L++   +  +SD+GL P+++  + P+R  GYRAPE+ + RK S K+DVYSFGVL+LE+LTGK+P      ++ VDLPRWVQSV  ++  ++V D EL
Sbjct:  436 GRTPLNWETRAGIALGAARAISYLHSRDGTT-SHGNIKSSNILLSDSYEAKVSDYGLAPIISSTSAPNRIDGYRAPEITDARKISQKADVYSFGVLILELLTGKSPTHQQLNEEGVDLPRWVQSVTEQQTPSDVLDPEL 573          
BLAST of CX287617 vs. ExPASy Swiss-Prot
Match: RLK90_ARATH (Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.779e-37
Identity = 77/140 (55.00%), Postives = 100/140 (71.43%), Query Frame = 3
Query:    9 GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT-PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 425
            GR PL+WE R  I LG ARG+ ++HS   P  +HGN+K+SN+L+    D  +SDFGL  L++  +T P+R+ GYRAPEV + R+ S K+DVYSFGV+LLE+LTGKAP  S   ++ +DL RWV SV REEW  EVFD EL
Sbjct:  456 GRPPLNWEVRSGIALGAARGLDYLHSQD-PLSSHGNVKSSNILLTNSHDARVSDFGLAQLVSASSTTPNRATGYRAPEVTDPRRVSQKADVYSFGVVLLELLTGKAPSNSVMNEEGMDLARWVHSVAREEWRNEVFDSEL 594          
BLAST of CX287617 vs. ExPASy Swiss-Prot
Match: Y5332_ARATH (Probable inactive receptor kinase At5g53320 OS=Arabidopsis thaliana GN=At5g53320 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 1.379e-36
Identity = 76/140 (54.29%), Postives = 97/140 (69.29%), Query Frame = 3
Query:    6 RGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 425
            R R  L+WETR+ ++ GTARGVAHIHS  G K  HGNIK+SN+ +N    GCIS  G+  LM+  + P  + GYRAPE+ +TRK +  SDVYSFG+L+ E+LTGK+        ++ +L RWV SVVREEWT EVFD EL
Sbjct:  399 RDRKRLEWETRLNMVYGTARGVAHIHSQSGGKLVHGNIKSSNIFLNGKGYGCISGTGMATLMH--SLPRHAVGYRAPEITDTRKGTQPSDVYSFGILIFEVLTGKS--------EVANLVRWVNSVVREEWTGEVFDEEL 528          
The following BLAST results are available for this feature:
BLAST of CX287617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
Y5830_ARATH4.257e-6276.81Probable inactive receptor kinase At5g58300 OS=Ara... [more]
Y3868_ARATH4.133e-4967.14Probable inactive receptor kinase At3g08680 OS=Ara... [more]
Y4374_ARATH2.772e-4561.15Probable inactive receptor kinase At4g23740 OS=Ara... [more]
Y2267_ARATH6.176e-4561.87Probable inactive receptor kinase At2g26730 OS=Ara... [more]
Y5516_ARATH1.165e-4358.74Probable receptor kinase At5g05160 OS=Arabidopsis ... [more]
Y1848_ARATH3.282e-3854.29Probable inactive receptor kinase At1g48480 OS=Ara... [more]
Y5168_ARATH7.312e-3853.96Probably inactive receptor-like protein kinase At5... [more]
Y3288_ARATH2.779e-3751.08Probable inactive receptor kinase At3g02880 OS=Ara... [more]
RLK90_ARATH2.779e-3755.00Probable inactive receptor kinase RLK902 OS=Arabid... [more]
Y5332_ARATH1.379e-3654.29Probable inactive receptor kinase At5g53320 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionC01011E04SK Veg1 Citrus clementina cDNA clone C01011E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287617 ID=CX287617; Name=CX287617; organism=Citrus clementina; type=EST; length=426bp
CGGCACGAGGTAGAACTCCACTGGACTGGGAGACAAGAGTAAAGATATTG
CTTGGGACAGCAAGGGGCGTTGCCCACATTCATTCTATGGGTGGTCCAAA
ATTCACTCATGGAAATATTAAAGCCTCAAATGTCCTCATCAACCAAGATC
TTGATGGATGCATCTCTGATTTTGGACTGACCCCTCTTATGAATGTCCCT
GCCACACCATCTCGGAGTGCAGGCTACCGTGCTCCTGAGGTGATTGAAAC
CCGTAAGCACAGTCATAAATCAGACGTGTATAGTTTTGGTGTCCTTCTCC
TTGAGATGCTGACTGGGAAAGCTCCACTCCAGTCACCAACGCGTGATGAT
ATGGTTGATCTCCCTAGGTGGGTTCAGTCTGTTGTTCGGGAAGAATGGAC
AGCTGAGGTTTTTGATGTCGAGTTGA
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