CX287631

Overview
NameCX287631
Unique NameCX287631
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length399
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA_PHAAU (Catalase OS=Phaseolus aureus PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 4.014e-49
Identity = 90/108 (83.33%), Postives = 99/108 (91.67%), Query Frame = 3
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPYK  PS+  N+PF TTN+GAPVWN+N+SLTVG+RGP+LLEDYHLVEKLA+F RERIPERVVHARGASAKGFFE THD+SHLTCAD  RAPGVQTPVIVRFSTVIH
Sbjct:    1 MDPYKYRPSSAFNSPFWTTNSGAPVWNNNNSLTVGTRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSHLTCADFLRAPGVQTPVIVRFSTVIH 108          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA_PEA (Catalase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 5.242e-49
Identity = 92/108 (85.19%), Postives = 97/108 (89.81%), Query Frame = 3
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPYK  PS+  N+PF TTN+GAPVWN+N SLTVGSRGP+LLEDYHLVEKLA F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVIVRFSTVIH
Sbjct:    1 MDPYKHRPSSAFNSPFWTTNSGAPVWNNNSSLTVGSRGPILLEDYHLVEKLAQFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIH 108          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA4_SOYBN (Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.168e-48
Identity = 90/108 (83.33%), Postives = 98/108 (90.74%), Query Frame = 3
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPYK  PS+  N+PF TTN+GAP+WN+N SLTVG+RGP+LLEDYHLVEKLA+F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVIVRFSTVIH
Sbjct:    1 MDPYKHRPSSAFNSPFWTTNSGAPIWNNNSSLTVGARGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIH 108          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA3_SOYBN (Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.168e-48
Identity = 90/108 (83.33%), Postives = 98/108 (90.74%), Query Frame = 3
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPYK  PS+  N+PF TTN+GAP+WN+N SLTVGSRGP+LLEDYHLVEKLA+F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTP+IVRFSTVIH
Sbjct:    1 MDPYKNRPSSAFNSPFWTTNSGAPIWNNNSSLTVGSRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPLIVRFSTVIH 108          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA3_NICPL (Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN=CAT3 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.168e-48
Identity = 89/108 (82.41%), Postives = 99/108 (91.67%), Query Frame = 3
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPYK  PS+ +N+PF TTN+GAPVWN+N S+TVG+RGP+LLEDYHLVEKLA+F RERIPERVVHARGASAKGFFE THDI+HLTCAD  RAPGVQTPVIVRFSTVIH
Sbjct:    1 MDPYKYRPSSANNSPFWTTNSGAPVWNNNSSMTVGTRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDITHLTCADFLRAPGVQTPVIVRFSTVIH 108          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA1_SOYBN (Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.168e-48
Identity = 90/108 (83.33%), Postives = 98/108 (90.74%), Query Frame = 3
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPYK  PS+  N+PF TTN+GAP+WN+N SLTVGSRGP+LLEDYHLVEKLA+F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTP+IVRFSTVIH
Sbjct:    1 MDPYKNRPSSAFNSPFWTTNSGAPIWNNNSSLTVGSRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPLIVRFSTVIH 108          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA1_RICCO (Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=2 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 3.398e-48
Identity = 89/108 (82.41%), Postives = 97/108 (89.81%), Query Frame = 3
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPY+  PS+  N PF TTN+GAPVWN+N SLTVGSRGP+LLEDYHL+EKLA+F RERIPERVVHARGASAKGFFE THD+SHLTCAD  RAPGVQTPVIVRFSTVIH
Sbjct:    1 MDPYRNRPSSGFNTPFWTTNSGAPVWNNNSSLTVGSRGPILLEDYHLIEKLANFDRERIPERVVHARGASAKGFFEVTHDVSHLTCADFLRAPGVQTPVIVRFSTVIH 108          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA_SOLAP (Catalase OS=Soldanella alpina PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 5.796e-48
Identity = 90/108 (83.33%), Postives = 96/108 (88.89%), Query Frame = 3
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPYK   S+  N PF TTN+GAPVWN+N SLTVG+RGP+LLEDYHLVEKLA+F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVIVRFSTVIH
Sbjct:    1 MDPYKYRSSSAFNTPFWTTNSGAPVWNNNSSLTVGTRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIH 108          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA2_ARATH (Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV=3)

HSP 1 Score: 189.119 bits (479), Expect = 5.796e-48
Identity = 88/108 (81.48%), Postives = 99/108 (91.67%), Query Frame = 3
Query:   75 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            MDPYK  P++++N+PF TTN+GAPVWN+N S+TVG RGP+LLEDYHLVEKLA+F RERIPERVVHARGASAKGFFE THDIS+LTCAD  RAPGVQTPVIVRFSTVIH
Sbjct:    1 MDPYKYRPASSYNSPFFTTNSGAPVWNNNSSMTVGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVIH 108          
BLAST of CX287631 vs. ExPASy Swiss-Prot
Match: CATA3_MAIZE (Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 1.291e-47
Identity = 86/110 (78.18%), Postives = 97/110 (88.18%), Query Frame = 3
Query:   69 IAMDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIH 398
            + MDP K  PS++H+    TTNAGAPVWNDN +LTVG RGP+LLEDYHL+EK+AHFARERIPERVVHARGASAKGFFECTHD++ LTCAD  RAPGV+TPVIVRFSTVIH
Sbjct:    1 MTMDPTKFRPSSSHDTTVTTTNAGAPVWNDNEALTVGPRGPILLEDYHLIEKVAHFARERIPERVVHARGASAKGFFECTHDVTSLTCADFLRAPGVRTPVIVRFSTVIH 110          
The following BLAST results are available for this feature:
BLAST of CX287631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_PHAAU4.014e-4983.33Catalase OS=Phaseolus aureus PE=2 SV=1[more]
CATA_PEA5.242e-4985.19Catalase OS=Pisum sativum PE=2 SV=1[more]
CATA4_SOYBN1.168e-4883.33Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1[more]
CATA3_SOYBN1.168e-4883.33Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1[more]
CATA3_NICPL1.168e-4882.41Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN... [more]
CATA1_SOYBN1.168e-4883.33Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1[more]
CATA1_RICCO3.398e-4882.41Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=... [more]
CATA_SOLAP5.796e-4883.33Catalase OS=Soldanella alpina PE=2 SV=1[more]
CATA2_ARATH5.796e-4881.48Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV... [more]
CATA3_MAIZE1.291e-4778.18Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC01011F07SK Veg1 Citrus clementina cDNA clone C01011F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287631 ID=CX287631; Name=CX287631; organism=Citrus clementina; type=EST; length=399bp
TCTCGACTCAACTCCACTTCTCCTTTCTTACGATAATAATAACAGTAGCA
AAATCTTCAGCAAGAAATATCGCCATGGATCCCTACAAATTGCTTCCGTC
AACTACTCACAATGCCCCCTTTATGACTACAAATGCCGGCGCTCCTGTCT
GGAACGACAATCACTCCTTGACTGTTGGAAGTAGAGGTCCTGTCCTTCTT
GAGGATTATCATCTGGTGGAGAAACTAGCTCATTTTGCCAGGGAGAGGAT
TCCAGAACGTGTCGTCCATGCTAGGGGAGCCAGTGCTAAGGGTTTCTTTG
AGTGCACCCATGATATTTCTCACCTTACTTGTGCTGATCTTTTTCGAGCT
CCAGGGGTTCAGACACCTGTCATTGTTCGCTTCTCCACTGTTATCCATG
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