CX287633

Overview
NameCX287633
Unique NameCX287633
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length410
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX287633 vs. ExPASy Swiss-Prot
Match: CQ061_BUFBG (UPF0451 protein C17orf61 homolog OS=Bufo bufo gargarizans PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.501e-14
Identity = 38/106 (35.85%), Postives = 58/106 (54.72%), Query Frame = 1 
Query:    4 IWHKIXXXXXXXXXXXXTYGAHGFK--PQNPSFKEVWQTASLYHLVHTAALVAAPITKNPNIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWAS 315
            +W ++             YGAHGF+   ++   KE+++T + YH +H+ AL+A P  + P + G LLT+GI+ FSGT Y  A   D   +  AP+GG   I  WA+
Sbjct:    6 VWGRLGAVSGALAVTAGAYGAHGFRRSDRDEYLKELFETGNRYHFLHSLALLAVPHCRRPLLAGSLLTSGIVLFSGTFYYQALSGDPTLTKAAPYGGTLLILGWAA 111
The following BLAST results are available for this feature:
BLAST of CX287633 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CQ061_BUFBG9.501e-1435.85UPF0451 protein C17orf61 homolog OS=Bufo bufo garg... [more]
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Properties
Property NameValue
Genbank descriptionC01011F09SK Veg1 Citrus clementina cDNA clone C01011F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287633 ID=CX287633; Name=CX287633; organism=Citrus clementina; type=EST; length=410bp
GTGATCTGGCATAAAATTGCTGCTGTATCTGGAGTAGCTGCACTTGGTTT
AGGCACCTATGGCGCCCATGGCTTCAAGCCCCAAAACCCCTCTTTCAAAG
AGGTATGGCAAACGGCTTCTCTTTACCATTTGGTTCACACAGCTGCTTTG
GTTGCTGCCCCTATCACTAAAAATCCCAACATTTTTGGAGGCCTTTTGAC
TGCCGGAATTCTAGCTTTCTCTGGGACGTGCTATACTGTGGCATTCCTTG
AGGACAGGAAGTACTCTACTCTAGCGCCCTTTGGTGGCTTTGCCTTCATT
GGAGCTTGGGCGAGCTTGCTATTCTAAGGATTTGGTCTTTAGCTACGTCC
TGTTGCTGCTTTGGTATCAAACAGATGCTGAAGGAATTTATTGGCATCGG
TCTCTTATCA
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