CX287668

Overview
NameCX287668
Unique NameCX287668
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length445
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287668 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 1.144e-79
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 3
Query:   18 TRTLHQQYELVKTRTASYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDW 443
            T TLHQQYELVKTRTASYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDW
Sbjct:  287 TETLHQQYELVKTRTASYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDW 428          
BLAST of CX287668 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 226.483 bits (576), Expect = 3.826e-59
Identity = 104/143 (72.73%), Postives = 122/143 (85.31%), Query Frame = 3
Query:   18 TRTLHQQYELVKTRTASYN-SYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDW 443
            T TLHQQYELVK RTA    SYGSHVMQYGD+G+SK+NL  Y+GTNPANDN+TF D NSL+P S+  NQRDADL+HFW+KYRKAPEG+ RK EAQKQ  EAMSHR+H+D+S+ L+GK+LFGI +GPE+LN VR AGQPLVDDW
Sbjct:  286 TETLHQQYELVKRRTAPVGYSYGSHVMQYGDVGISKDNLDLYMGTNPANDNFTFADANSLKPPSRVTNQRDADLVHFWEKYRKAPEGSARKTEAQKQVLEAMSHRLHIDNSVILVGKILFGISRGPEVLNKVRSAGQPLVDDW 428          
BLAST of CX287668 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 9.423e-58
Identity = 107/148 (72.30%), Postives = 123/148 (83.11%), Query Frame = 3
Query:    3 RAEFGTRTLHQQYELVKTRTASYNSY-GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDW 443
            R    T TLHQQY+LVK RT S   Y GSHVMQYGD+GLSK+ LF YLGT+PAN+N TFVDENSL  +SKAVNQRDADL+HFWDK+RKAPEG+P+K EA+KQ  E MSHRMH+D S++L+GKLLFGIEK PE+LN VRPAG  LVDDW
Sbjct:  271 RHNLRTETLHQQYKLVKERTISGGLYYGSHVMQYGDVGLSKDILFHYLGTDPANENLTFVDENSLWSSSKAVNQRDADLVHFWDKFRKAPEGSPKKNEARKQVLEVMSHRMHIDDSVELVGKLLFGIEKAPELLNAVRPAGSALVDDW 418          
BLAST of CX287668 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 1.839e-53
Identity = 100/143 (69.93%), Postives = 120/143 (83.92%), Query Frame = 3
Query:   18 TRTLHQQYELVKTRTA-SYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDW 443
            T TLH+QYELVK RTA S  SYGSHVM++GDIGLSK  L  ++GTNPA++N+TFV+ENS+RP S+  NQRDADL+HFW KY+KAPEG+ RK EAQKQ  EAMSHR+HVD+SI LIG LLFG+E G  +LN VRP+G+PLVDDW
Sbjct:  271 TETLHEQYELVKKRTAGSGKSYGSHVMEFGDIGLSKEKLVLFMGTNPADENFTFVNENSIRPPSRVTNQRDADLVHFWHKYQKAPEGSARKVEAQKQVLEAMSHRLHVDNSILLIGILLFGLE-GHAVLNKVRPSGEPLVDDW 412          
BLAST of CX287668 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 2.402e-53
Identity = 101/146 (69.18%), Postives = 120/146 (82.19%), Query Frame = 3
Query:   18 TRTLHQQYELVKTRTASYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENS----LRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDW 443
            T +L QQY+LVK RT S   YGSHVM+YGDIGLSKN+L+ YLGTNPANDN +FVDE      LR  S AVNQRDADL+HFW+K+RKAPEG+ +K EA+KQ  EAMSHR H+D+S+KLIG+LLFGIEKG E+L+ VRPAG PLVD+W
Sbjct:  283 TESLQQQYKLVKNRTIS-EPYGSHVMEYGDIGLSKNDLYQYLGTNPANDNNSFVDETENSLKLRTPSAAVNQRDADLIHFWEKFRKAPEGSSQKNEAEKQVLEAMSHRKHIDNSVKLIGQLLFGIEKGTELLDVVRPAGSPLVDNW 427          
BLAST of CX287668 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 2.048e-28
Identity = 63/142 (44.37%), Postives = 91/142 (64.08%), Query Frame = 3
Query:   24 TLHQQYELVKTRTASYNSY--GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDW 443
            T+ QQY  VK RT++YN+Y  GSHVMQYG+  +  + L+ + G +PA+ N+   +   L    + VNQRDA+L   W  Y+++  G+ +K E  +Q  +A+ HR H+D S++LIG LLFG +K   IL +VR  G PLVDDW
Sbjct:  291 TVKQQYSSVKARTSNYNTYAAGSHVMQYGNQSIKADKLYLFQGFDPASVNFP-PNNAHLNAPMEVVNQRDAELHFMWQLYKRSENGSEKKKEILQQIKDAIKHRSHLDSSMQLIGDLLFGPKKASAILKSVREPGSPLVDDW 431          
BLAST of CX287668 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.733e-27
Identity = 61/142 (42.96%), Postives = 88/142 (61.97%), Query Frame = 3
Query:   24 TLHQQYELVKTRTASYNSY--GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDW 443
            ++ QQY+ VK RT+++ +Y  GSHVMQYGD  ++   L+ Y G +PA  N+       L+   + VNQRDA+LL  W  Y+++     +K +  KQ  E + HR H+D S++LIG LL+G EK   +L +VR  G PLVDDW
Sbjct:  287 SVEQQYQSVKQRTSNFEAYAMGSHVMQYGDANMTAEKLYLYHGFDPATVNFP-PHNGRLKSKMEVVNQRDAELLFMWQVYQRSNHLPEKKTDILKQIEEIVKHRKHLDGSVELIGVLLYGPEKASSVLRSVRTTGLPLVDDW 427          
BLAST of CX287668 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.862e-27
Identity = 60/142 (42.25%), Postives = 86/142 (60.56%), Query Frame = 3
Query:   24 TLHQQYELVKTRTASYNSY--GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDW 443
            ++ QQY+ VK RT+++N+Y  GSHVMQYGD  ++   L+ Y G +PA  N+       L    + VNQRDA+L   W  Y+++   +  K +  KQ  E + HR H+D S++LIG LL+G  KG  +L +VR  G  LVDDW
Sbjct:  289 SVKQQYKSVKQRTSNFNNYAMGSHVMQYGDTNITAEKLYLYQGFDPATVNFP-PQNGRLETKMEVVNQRDAELFLLWQMYQRSNHQSENKTDILKQIAETVKHRKHIDGSVELIGVLLYGPGKGSSVLQSVRAPGSSLVDDW 429          
BLAST of CX287668 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 5.043e-27
Identity = 62/142 (43.66%), Postives = 88/142 (61.97%), Query Frame = 3
Query:   24 TLHQQYELVKTRTASYNSY--GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDW 443
            T+ QQY+ V+ RT++ NSY  GSHVMQYGD  ++   L+ Y G +PA  N+   + N L    + VNQRDA+LL  W  Y+++     +K    +Q  E + HR H+D S++LIG LL+G  K   +L++VR  G PLVDDW
Sbjct:  269 TVQQQYQSVRKRTSNSNSYRFGSHVMQYGDTNITAEKLYLYHGFDPATVNFPPHNGN-LEAKMEVVNQRDAELLFMWQMYQRSNHQPEKKTHILEQITETVKHRNHLDGSVELIGVLLYGPGKSSSVLHSVRAPGLPLVDDW 409          
BLAST of CX287668 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 3.269e-26
Identity = 62/142 (43.66%), Postives = 86/142 (60.56%), Query Frame = 3
Query:   24 TLHQQYELVKTRTASYNSY--GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDW 443
            T+ QQY  VK RT++YN+Y  GSHVM+YG+  +    L+ Y G +PA  N   ++E  ++     VNQRDADLL  W  YR + +G+ +K +  K+  E   HR H+D S++LI  +LFG      +LN VR  G PLVDDW
Sbjct:  280 TIKQQYHTVKMRTSNYNTYSGGSHVMEYGNNSIKSEKLYLYQGFDPATVNLP-LNELPVKSKIGVVNQRDADLLFLWHMYRTSEDGSRKKDDTLKELTETTRHRKHLDASVELIATILFG--PTMNVLNLVREPGLPLVDDW 418          
The following BLAST results are available for this feature:
BLAST of CX287668 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
VPE_CITSI1.144e-7999.30Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPEG_ARATH3.826e-5972.73Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPE1_PHAVU9.423e-5872.30Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEA_ARATH1.839e-5369.93Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_VICSA2.402e-5369.18Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPE_RICCO2.048e-2844.37Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
VPE2_PHAVU1.733e-2742.96Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPE_SOYBN3.862e-2742.25Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
LEGU_CANEN5.043e-2743.66Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPEB_ARATH3.269e-2643.66Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionC01012A12SK Veg1 Citrus clementina cDNA clone C01012A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287668 ID=CX287668; Name=CX287668; organism=Citrus clementina; type=EST; length=445bp
CTCGTGCCGAATTCGGCACGAGGACTCTTCACCAGCAGTATGAACTGGTT
AAAACAAGGACTGCTAGTTACAATTCGTATGGCTCTCATGTCATGCAATA
TGGTGATATCGGTCTTAGCAAGAACAATCTCTTCACGTACTTGGGTACAA
ATCCTGCAAATGATAACTACACTTTTGTGGATGAGAACTCCTTAAGGCCA
GCATCTAAAGCTGTTAACCAGCGAGATGCCGATCTCTTGCATTTCTGGGA
CAAGTACCGCAAGGCACCTGAGGGCACTCCTAGGAAGGCTGAAGCTCAGA
AGCAGTTTTTTGAAGCAATGTCTCATAGAATGCATGTAGACCACAGCATC
AAACTTATTGGAAAGCTCTTATTTGGAATTGAGAAAGGTCCAGAGATCTT
GAACACTGTTCGACCTGCTGGTCAGCCTCTTGTTGATGACTGGGG
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