CX287669
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287669 vs. ExPASy Swiss-Prot
Match: YCF72_ORYSJ (Uncharacterized protein ycf72 OS=Oryza sativa subsp. japonica GN=ycf72-1 PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.086e-50 Identity = 86/98 (87.76%), Postives = 88/98 (89.80%), Query Frame = -1 Query: 88 TTPLTTGRFPSQHLDPALPKLFWFAPTFPTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFATAPAALANCPPFPSVISMLCMAVPKGISVEVDSSF 381 TTPLTTGR PSQHLDPALPKLFWF PT PTCPTVA+QF D KRTSP+GN VAD PSFAISFATAPAALANCPP P VISMLCMAVPKGISVEVDSSF Sbjct: 18 TTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115 HSP 2 Score: 38.1206 bits (87), Expect = 1.086e-50 Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = -3 Query: 23 INQNPFPNRTSFFQSIRLSGC 85 +++NPFPN TSFFQSIRLS C Sbjct: 116 LSKNPFPNCTSFFQSIRLSRC 136
BLAST of CX287669 vs. ExPASy Swiss-Prot
Match: YCF72_ORYSI (Uncharacterized protein ycf72 OS=Oryza sativa subsp. indica GN=ycf72-1 PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.086e-50 Identity = 86/98 (87.76%), Postives = 88/98 (89.80%), Query Frame = -1 Query: 88 TTPLTTGRFPSQHLDPALPKLFWFAPTFPTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFATAPAALANCPPFPSVISMLCMAVPKGISVEVDSSF 381 TTPLTTGR PSQHLDPALPKLFWF PT PTCPTVA+QF D KRTSP+GN VAD PSFAISFATAPAALANCPP P VISMLCMAVPKGISVEVDSSF Sbjct: 18 TTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115 HSP 2 Score: 38.1206 bits (87), Expect = 1.086e-50 Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = -3 Query: 23 INQNPFPNRTSFFQSIRLSGC 85 +++NPFPN TSFFQSIRLS C Sbjct: 116 LSKNPFPNCTSFFQSIRLSRC 136
BLAST of CX287669 vs. ExPASy Swiss-Prot
Match: YCF72_ORYSA (Uncharacterized protein ycf72 OS=Oryza sativa GN=ycf72-1 PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.086e-50 Identity = 86/98 (87.76%), Postives = 88/98 (89.80%), Query Frame = -1 Query: 88 TTPLTTGRFPSQHLDPALPKLFWFAPTFPTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFATAPAALANCPPFPSVISMLCMAVPKGISVEVDSSF 381 TTPLTTGR PSQHLDPALPKLFWF PT PTCPTVA+QF D KRTSP+GN VAD PSFAISFATAPAALANCPP P VISMLCMAVPKGISVEVDSSF Sbjct: 18 TTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115 HSP 2 Score: 38.1206 bits (87), Expect = 1.086e-50 Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = -3 Query: 23 INQNPFPNRTSFFQSIRLSGC 85 +++NPFPN TSFFQSIRLS C Sbjct: 116 LSKNPFPNCTSFFQSIRLSRC 136
BLAST of CX287669 vs. ExPASy Swiss-Prot
Match: YCF72_ORYNI (Uncharacterized protein ycf72 OS=Oryza nivara GN=ycf72-1 PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.086e-50 Identity = 86/98 (87.76%), Postives = 88/98 (89.80%), Query Frame = -1 Query: 88 TTPLTTGRFPSQHLDPALPKLFWFAPTFPTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFATAPAALANCPPFPSVISMLCMAVPKGISVEVDSSF 381 TTPLTTGR PSQHLDPALPKLFWF PT PTCPTVA+QF D KRTSP+GN VAD PSFAISFATAPAALANCPP P VISMLCMAVPKGISVEVDSSF Sbjct: 18 TTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115 HSP 2 Score: 38.1206 bits (87), Expect = 1.086e-50 Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = -3 Query: 23 INQNPFPNRTSFFQSIRLSGC 85 +++NPFPN TSFFQSIRLS C Sbjct: 116 LSKNPFPNCTSFFQSIRLSRC 136
BLAST of CX287669 vs. ExPASy Swiss-Prot
Match: YCF72_SACOF (Uncharacterized protein ycf72 OS=Saccharum officinarum GN=ycf72-1 PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 4.086e-50 Identity = 85/98 (86.73%), Postives = 88/98 (89.80%), Query Frame = -1 Query: 88 TTPLTTGRFPSQHLDPALPKLFWFAPTFPTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFATAPAALANCPPFPSVISMLCMAVPKGISVEVDSSF 381 TTPLTTGR PSQHLDPALPKLFWF PT PTCPTVA+QF D KRTSP+GN VA+ PSFAISFATAPAALANCPP P VISMLCMAVPKGISVEVDSSF Sbjct: 18 TTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVANLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115 HSP 2 Score: 38.1206 bits (87), Expect = 4.086e-50 Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = -3 Query: 23 INQNPFPNRTSFFQSIRLSGC 85 +++NPFPN TSFFQSIRLS C Sbjct: 116 LSKNPFPNCTSFFQSIRLSRC 136
BLAST of CX287669 vs. ExPASy Swiss-Prot
Match: YCF72_SACHY (Uncharacterized protein ycf72 OS=Saccharum hybrid GN=ycf72-1 PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 4.086e-50 Identity = 85/98 (86.73%), Postives = 88/98 (89.80%), Query Frame = -1 Query: 88 TTPLTTGRFPSQHLDPALPKLFWFAPTFPTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFATAPAALANCPPFPSVISMLCMAVPKGISVEVDSSF 381 TTPLTTGR PSQHLDPALPKLFWF PT PTCPTVA+QF D KRTSP+GN VA+ PSFAISFATAPAALANCPP P VISMLCMAVPKGISVEVDSSF Sbjct: 18 TTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVANLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115 HSP 2 Score: 38.1206 bits (87), Expect = 4.086e-50 Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = -3 Query: 23 INQNPFPNRTSFFQSIRLSGC 85 +++NPFPN TSFFQSIRLS C Sbjct: 116 LSKNPFPNCTSFFQSIRLSRC 136
BLAST of CX287669 vs. ExPASy Swiss-Prot
Match: YCF72_MAIZE (Uncharacterized protein ycf72 OS=Zea mays GN=ycf72-1 PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 6.942e-50 Identity = 85/98 (86.73%), Postives = 88/98 (89.80%), Query Frame = -1 Query: 88 TTPLTTGRFPSQHLDPALPKLFWFAPTFPTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFATAPAALANCPPFPSVISMLCMAVPKGISVEVDSSF 381 TTPLTTGR PSQHLDPALPKLFWF PT PTCPTVA+QF D KRTSP+GN VA+ PSFAISFATAPAALANCPP P VISMLCMAVPKGISVEVDSSF Sbjct: 18 TTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVANLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115 HSP 2 Score: 37.3502 bits (85), Expect = 6.942e-50 Identity = 16/20 (80.00%), Postives = 18/20 (90.00%), Query Frame = -3 Query: 23 NQNPFPNRTSFFQSIRLSGC 82 ++NPFPN TSFFQSIRLS C Sbjct: 117 SKNPFPNCTSFFQSIRLSRC 136
BLAST of CX287669 vs. ExPASy Swiss-Prot
Match: RK2_CITSI (50S ribosomal protein L2, chloroplastic OS=Citrus sinensis GN=rpl2-A PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.616e-45 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 2 Query: 107 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 379 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX287669 vs. ExPASy Swiss-Prot
Match: RK2_BUXMI (50S ribosomal protein L2, chloroplastic OS=Buxus microphylla GN=rpl2-A PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.616e-45 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 2 Query: 107 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 379 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV Sbjct: 129 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 219
BLAST of CX287669 vs. ExPASy Swiss-Prot
Match: RK2_NYMAL (50S ribosomal protein L2, chloroplastic OS=Nymphaea alba GN=rpl2-A PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 3.599e-45 Identity = 90/91 (98.90%), Postives = 91/91 (100.00%), Query Frame = 2 Query: 107 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 379 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL+LPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 221 The following BLAST results are available for this feature:
BLAST of CX287669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287669 ID=CX287669; Name=CX287669; organism=Citrus clementina; type=EST; length=381bpback to top |