CX287685
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287685 vs. ExPASy Swiss-Prot
Match: ATL1J_ARATH (RING-H2 finger protein ATL1J OS=Arabidopsis thaliana GN=ATL1J PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.270e-50 Identity = 98/200 (49.00%), Postives = 130/200 (65.00%), Query Frame = 2 Query: 8 FIGKFHSRKLLLQHPYNQQPI----TAAPPPYPAKGCLHFNVVMFFSILISAVVCSLGFHFLIRCVFLRCSRLLDSESNANSSTPLGKSS-GIQQESLRDFPVVNYSTELKLSGSDTECVICLSEFAPGESLRVLPKCNHGFHVHCIDKWLRSHSSCPKCRHCLIETCEESVGFSQTSSSEHSVVVPETVDSIRPLEPEG 592 F+G F +RKLLL P++ + A P + L NV+M S+LI ++C LG H++IRC F R SR + SE ++ STP S+ GI++++LR FPVV+YS E+ L G ECVICLS+F GE LR+LPKCNHGFHV CIDKWL+ H +CPKCRHCL+ETC++ +G + S S + I PLEPEG Sbjct: 17 FLGSFVTRKLLLHDPFDHNSLRVFAVAPSPLITHENNLKGNVLMLLSVLICGIICCLGLHYIIRCAFRRSSRFMISEPISSLSTPRSSSNKGIKKKALRMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCLVETCQKILGDFSQADSMASTPTESVIVRIDPLEPEG 216
BLAST of CX287685 vs. ExPASy Swiss-Prot
Match: ATL1I_ARATH (RING-H2 finger protein ATL1I OS=Arabidopsis thaliana GN=ATL1I PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.404e-49 Identity = 97/199 (48.74%), Postives = 129/199 (64.82%), Query Frame = 2 Query: 11 IGKFHSRKLLLQHPYN---QQPITAAPPPYPA-KGCLHFNVVMFFSILISAVVCSLGFHFLIRCVFLRCSRLLDSESNANSSTPLGKSS-GIQQESLRDFPVVNYSTELKLSGSDTECVICLSEFAPGESLRVLPKCNHGFHVHCIDKWLRSHSSCPKCRHCLIETCEESVGFSQTSSSEHSVVVPETVDSIRPLEPEG 592 +G F SRKLLL +P++ Q+ AP P + L NV+M S+LI ++C LG H++IRC F R S + SE A STP G S+ GI +++LR FPVV+YS E+ L G ECVICLS+F GE +R+LPKC+HGFHV CIDKWL+ H +CPKCRHCL+ETC++ +G + + + I PLEPEG Sbjct: 19 LGGFVSRKLLLHNPFDHNTQRAFAVAPSPLITHENNLSGNVLMLLSVLICGIICCLGLHYIIRCAFRRTSSFMISEPIAGLSTPCGSSNKGINKKALRMFPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRHCLVETCQKILGDFSQADQVAATPTASVIVRIAPLEPEG 217
BLAST of CX287685 vs. ExPASy Swiss-Prot
Match: ATL1K_ARATH (RING-H2 finger protein ATL1K OS=Arabidopsis thaliana GN=ATL1K PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.648e-48 Identity = 102/205 (49.76%), Postives = 139/205 (67.80%), Query Frame = 2 Query: 8 FIGKFHSRKLLLQHPYN---QQPITAAPPPYPA-KGCLHFNVVMFFSILISAVVCSLGFHFLIRCVFLRCSRLLDSESNANSSTPLGKSS-GIQQESLRDFPVVNYSTELKLSGSDTECVICLSEFAPGESLRVLPKCNHGFHVHCIDKWLRSHSSCPKCRHCLIETCEESVG-FSQTSS--SEHSVVVPETVDSIRPLEPEGII 598 F+G F SRKLLL +P++ Q+ AP P + L NV+M SILI ++C LG H++IRC R +R + SE + S+ G S+ GI++++LR FPVV+YS E+ L G D ECVICLS+F GE LR+LPKCNHGFHV CIDKWL+ H +CPKCR+CL+ETC++ +G FSQ S +E + +V + +I PLEP I+ Sbjct: 17 FLGGFVSRKLLLHNPFDHNTQRAFAVAPSPLITHENNLSGNVMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSNKGIKKKALRMFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVETCQKILGDFSQADSVTAEPTEIV---IVTIVPLEPTEIV 218
BLAST of CX287685 vs. ExPASy Swiss-Prot
Match: ATL1L_ARATH (RING-H2 finger protein ATL1L OS=Arabidopsis thaliana GN=ATL1L PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.458e-48 Identity = 98/196 (50.00%), Postives = 131/196 (66.84%), Query Frame = 2 Query: 5 DFIGKFHSRKLLLQHPYNQQPITAAPPPYPAKGCLHFNVVMFFSILISAVVCSLGFHFLIRCVFLRCSRLLDSESNANSSTPLGKSSGIQQESLRDFPVVNYSTELKLSGSDTECVICLSEFAPGESLRVLPKCNHGFHVHCIDKWLRSHSSCPKCRHCLIETCEESVGFSQTSSSEHSVVVPETVD-SIRPLEPE 589 + +G +SRKLL H ++Q P T AP PY NVVM S+L+ A+VCSLG + +IRC LRCS L+ SE+ ++ ++G+++++L+ F V+YSTEL L G DTEC ICLSEF E +++LP C+HGFHV CIDKWL SHSSCP CRHCLI+TCE+ SQTSS + +++ I PLEPE Sbjct: 20 EILGSSYSRKLLF-HTHDQSP-TPAPSPYVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCA-LRCSNLVPSEAGGDNYPVRLTNTGVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHCLIQTCEKIADCSQTSSLNSTQPPQDSIILQIAPLEPE 212
BLAST of CX287685 vs. ExPASy Swiss-Prot
Match: ATL5B_ARATH (RING-H2 finger protein ATL5B OS=Arabidopsis thaliana GN=ATL5B PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.975e-28 Identity = 61/126 (48.41%), Postives = 89/126 (70.63%), Query Frame = 2 Query: 116 NVVMFFSILISAVVCSLGFHFLIRCVFLRCSR-LLDSESNANSSTPLGKSSGIQQESLRDFPVVNYSTELKLSGSDTECVICLSEFAPGESLRVLPKCNHGFHVHCIDKWLRSHSSCPKCRHCLIE 490 ++V+ + L+ A++C+LG + ++RCV LRC+R +E +++ + K GI++ +L+ PV +YS ELK+ TEC+ICL +F GE++RVLPKCNHGFHV CID WL SHSSCP CR L+E Sbjct: 40 HMVIILAALLCALICALGINSVLRCV-LRCTRRFTPNEDPVDTNANVAK--GIKKRALKVIPVDSYSPELKMKA--TECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSLLE 160
BLAST of CX287685 vs. ExPASy Swiss-Prot
Match: ATL1R_ARATH (RING-H2 finger protein ATL1R OS=Arabidopsis thaliana GN=ATL1R PE=2 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.279e-26 Identity = 62/166 (37.35%), Postives = 91/166 (54.82%), Query Frame = 2 Query: 38 LLQHPYNQQPITAAPPPYPAKGCLHFNVVMFFSILISAVVCSLGFHFLIRCVFLRCSRLLDSESNANSSTPLGKSSGIQQESLRDFPVVNYSTELKLSGSDTECVICLSEFAPGESLRVLPKCNHGFHVHCIDKWLRSHSSCPKCRHCLIET-CEESVGFSQTSSS 532 LLQ + P A+PP + ++V+ ++L+ A+ C +G + RC +LR + + + G++++ LR P + YS + + EC ICL+EFA G+ LRVLP+C HGFHV CID WL SHSSCP CR L+ T C + G +SSS Sbjct: 8 LLQEANSTSPAEASPP-------FNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSS 166
BLAST of CX287685 vs. ExPASy Swiss-Prot
Match: ATL5A_ARATH (RING-H2 finger protein ATL5A OS=Arabidopsis thaliana GN=ATL5A PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.859e-26 Identity = 59/126 (46.83%), Postives = 83/126 (65.87%), Query Frame = 2 Query: 116 NVVMFFSILISAVVCSLGFHFLIRCVFLRCSRLLDSESNANSSTPLGKSSGIQQESLRDFPVVNY-STELKLSGSDTECVICLSEFAPGESLRVLPKCNHGFHVHCIDKWLRSHSSCPKCRHCLIE 490 N+V+ + L+ A++ +LG + ++RC +RC L S + A + + +G+++ L+ FPV Y S E+K++ TEC ICL EFA GE +RVLP CNH FH+ CID WL SHSSCP CRH LIE Sbjct: 33 NMVIILAALLCALILALGLNSILRCA-MRCGFGLSSSAAAGT---VADRAGLKKRELKKFPVAEYGSGEVKIAA--TECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSLIE 152
BLAST of CX287685 vs. ExPASy Swiss-Prot
Match: ATL3C_ARATH (RING-H2 finger protein ATL3C OS=Arabidopsis thaliana GN=ATL3C PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.288e-26 Identity = 65/159 (40.88%), Postives = 94/159 (59.12%), Query Frame = 2 Query: 38 LLQHPYNQQPITAAPPPYPAKGCLHF--NVVMFFSILISAVVCSLGFHFLIRCVFLRCSRLLDSE------SNANSSTP-LGKSSGIQQESLRDFPVVNYSTELKLSGSDTECVICLSEFAPGESLRVLPKCNHGFHVHCIDKWLRSHSSCPKCRHCLI 487 LL P P A P P +F N+V+ + L+ A++C+L + +RCV LR +R S+ SNAN++ L ++G+++++L+ PV Y + + + TEC+ICL +F GE +RVLPKCNHGFHV CID WL S SSCP CR L+ Sbjct: 4 LLLEPQANAPANANPKPKGGINDTYFDTNMVIILAALLCALICALSLNSALRCV-LRITRRFTSDDQVSNASNANANLGRLAAATGLKKQALKQIPVGLYGSGI-IDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLL 160
BLAST of CX287685 vs. ExPASy Swiss-Prot
Match: ATL1B_ARATH (RING-H2 finger protein ATL1B OS=Arabidopsis thaliana GN=ATL1B PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.197e-24 Identity = 60/160 (37.50%), Postives = 92/160 (57.50%), Query Frame = 2 Query: 71 TAAPPPYPAKGCLHFNVVMFFSILISAVVCSLGFHFLIRCVFLRC----SRLLDSESNANSSTPLGKSS-GIQQESLRDFPVVNYSTELKLSGSDTECVICLSEFAPGESLRVLPKCNHGFHVHCIDKWLRSHSSCPKCRHCL-IETCEESVGFSQTSSS 532 T +P + L+ ++V+ + L+ A++C LG + RCV+LR +R + + P+ ++ G++++ L+ P + +S E S EC ICL+EF+ G+ LRVLP+C HGFHV CID WL SHSSCP CR L + C + G +SSS Sbjct: 14 TPSPAIDNSTAALNSDLVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRTVSGSQTQSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVARCHKCGGLPGSSSS 173
BLAST of CX287685 vs. ExPASy Swiss-Prot
Match: ATL2A_ARATH (RING-H2 finger protein ATL2A OS=Arabidopsis thaliana GN=ATL2A PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.758e-24 Identity = 59/160 (36.88%), Postives = 88/160 (55.00%), Query Frame = 2 Query: 71 TAAPPPYPAKGCL--HFNVVMFFSILISAVVCSLGFHFLIRCVFLRCSRLLDSESNANSSTPLGKSSGIQQESLRDFPVVNYSTELKLSGS------DTECVICLSEFAPGESLRVLPKCNHGFHVHCIDKWLRSHSSCPKCRHCLIETCEESVGFSQTS 526 TAAPPP P++ + ++V+ S L+ A++C G ++RC +LR A +P + G+++++L+ P ++ SG+ TEC ICL++FA GE +RVLP C H FHV CIDKWL S SSCP CR L + G + T+ Sbjct: 10 TAAPPPQPSEEMIAAESDMVVILSALLCALICVAGLAAVVRCAWLR-------RFTAGGDSP-SPNKGLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCRRILTPVRCDRCGHASTA 161 The following BLAST results are available for this feature:
BLAST of CX287685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287685 ID=CX287685; Name=CX287685; organism=Citrus clementina; type=EST; length=663bpback to top |