CX288485
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288485 vs. ExPASy Swiss-Prot
Match: EIF3B_ARATH (Eukaryotic translation initiation factor 3 subunit B OS=Arabidopsis thaliana GN=TIF3B1 PE=1 SV=1) HSP 1 Score: 360.147 bits (923), Expect = 5.276e-99 Identity = 173/209 (82.78%), Postives = 188/209 (89.95%), Query Frame = 1 Query: 13 IFDVRTGKVMRDFKGSADEFXXXXXXXXXXXSWPVFRWGGGKD-KYFAKLGKNMISVYETESFTLIDKKSLKVENVMDFSWSPTDPIISLFVPELGGGNQPARVSLVQIPSKEELRQKNLFSVSDCKMYWQSSGDYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHGDSPRPDISFYSMR 636 +FDVRTG++MRDFKGSADEF SWPVFRW GGKD KYFAKL KN ISVYETE+F+LIDKKS+KV+NV+D WSPTD I+SLFVPE GGGNQPA+V+LVQIPSK ELRQKNLFSVSDCKMYWQSSG+YLAVKVDRYTKTKKSTY+GFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHGD PRPD+SFYSM+ Sbjct: 285 VFDVRTGRMMRDFKGSADEFSIGGPGGVAGASWPVFRWAGGKDDKYFAKLSKNTISVYETETFSLIDKKSMKVDNVVDICWSPTDSILSLFVPEQGGGNQPAKVALVQIPSKVELRQKNLFSVSDCKMYWQSSGEYLAVKVDRYTKTKKSTYSGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHGDQPRPDVSFYSMK 493
BLAST of CX288485 vs. ExPASy Swiss-Prot
Match: EIF3B_TOBAC (Eukaryotic translation initiation factor 3 subunit B OS=Nicotiana tabacum GN=TIF3B1 PE=2 SV=1) HSP 1 Score: 324.709 bits (831), Expect = 2.456e-88 Identity = 164/210 (78.10%), Postives = 177/210 (84.29%), Query Frame = 1 Query: 10 NIFDVRTGKVMRDFKGSADEFXXXXXXXXXXXSWPVFRWGGGK-DKYFAKLGKNMISVYETESFTLIDKKSLKVENVMDFSWSPTDPIISLFVPELGGGNQPARVSLVQIPSKEELRQKNLFSVSDCKMYWQSSGDYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHG-DSPRPDISFYSM 633 NI DVRTGKVMRDF+GSADEF SWPVFRW GGK DKYFA++GKN+ISVYETE+F+LIDKKS+KVENVMDFSWSP DPI++LFVPE G NQPARVSLVQIPSKEELRQKNLFSVSDCKMYWQS+GDYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELDN NDKI AF W P+G +PRPDI FYS+ Sbjct: 288 NISDVRTGKVMRDFQGSADEFAVGGTGGVTGVSWPVFRWSGGKQDKYFARIGKNVISVYETETFSLIDKKSIKVENVMDFSWSPADPILALFVPECG--NQPARVSLVQIPSKEELRQKNLFSVSDCKMYWQSNGDYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELDNTNDKIPAFGWGPEGSPICCYPSVTTPRPDIRFYSV 495
BLAST of CX288485 vs. ExPASy Swiss-Prot
Match: EIF3B_BOMMO (Eukaryotic translation initiation factor 3 subunit B OS=Bombyx mori GN=eIF3-S9 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 8.541e-49 Identity = 98/215 (45.58%), Postives = 143/215 (66.51%), Query Frame = 1 Query: 13 IFDVRTGKVMRDFKGSADEFXXXXXXXXXXXSWPVFRWGGGKDKYFAKLGKNMISVYETESFTLIDKKSLKVENVMDFSWSPTDPIISLFVPELGGGNQPARVSLVQIPSKEELRQKNLFSVSDCKMYWQSSGDYLAVKVDRYTKTKK--------STYTGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHGDSPRPDISFYSM 633 I D+RTG+ R F DE+ +WP+FRW D++FA++G +++SVYET F L+DKKS+K+ + DFSWSP+D ++ +V E + PARV+L++IP++ E+R KNLFSV+DCK++WQ SGDYL VKVDRY+K KK Y FE+F ++E++IP++ +E+ + I AFAWEP G +F++IHGD ISFY + Sbjct: 281 IGDIRTGQEKRSFP-PPDEYV----------TWPIFRWSKD-DRFFARIGADVLSVYETPGFGLLDKKSIKIPGIRDFSWSPSDNTLAYWVAE--DKDVPARVTLLEIPNRTEVRSKNLFSVADCKIHWQKSGDYLCVKVDRYSKVKKDKIDIKYSGMYYNFEIFHMREKEIPVDSVEI---KEPIQAFAWEPVGSKFSIIHGDPANISISFYQV 478
BLAST of CX288485 vs. ExPASy Swiss-Prot
Match: EIF3B_BOVIN (Eukaryotic translation initiation factor 3 subunit B OS=Bos taurus GN=EIF3B PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.245e-48 Identity = 92/208 (44.23%), Postives = 140/208 (67.31%), Query Frame = 1 Query: 13 IFDVRTGKVMRDFKGSADEFXXXXXXXXXXXSWPVFRWGGGKDKYFAKLGKNMISVYETESFTLIDKKSLKVENVMDFSWSPTDPIISLFVPELGGGNQPARVSLVQIPSKEELRQKNLFSVSDCKMYWQSSGDYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHGDSPRPDISFYSMR 636 I+D+ TG+ R F + WP+F+W K+FA++ + +S+YET S L+DKKSLK+ + DFSWSP II+ +VPE + PARV+L+Q+P+++E+R +NLF+V DCK++WQ +GDYL VKVDR K + T FE+FR++E+ +P++V+E+ + IIAFAWEP G +FAV+HG++PR +SFY ++ Sbjct: 378 IWDILTGQKKRGFHCESSAH------------WPIFKWSHD-GKFFARMTLDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPE--DKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQGVVTNFEIFRMREKQVPVDVVEM---KETIIAFAWEPNGSKFAVLHGEAPRISVSFYHVK 567
BLAST of CX288485 vs. ExPASy Swiss-Prot
Match: EIF3B_RAT (Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus GN=Eif3b PE=1 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 5.536e-48 Identity = 92/208 (44.23%), Postives = 139/208 (66.83%), Query Frame = 1 Query: 13 IFDVRTGKVMRDFKGSADEFXXXXXXXXXXXSWPVFRWGGGKDKYFAKLGKNMISVYETESFTLIDKKSLKVENVMDFSWSPTDPIISLFVPELGGGNQPARVSLVQIPSKEELRQKNLFSVSDCKMYWQSSGDYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHGDSPRPDISFYSMR 636 I+D+ TG R F + WP+F+W K+FA++ + +S+YET S L+DKKSLK+ + DFSWSP II+ +VPE + PARV+L+Q+P+++E+R +NLF+V DCK++WQ +GDYL VKVDR K + T FE+FR++E+ +P++V+E+ + IIAFAWEP G +FAV+HG++PR +SFY ++ Sbjct: 389 IWDILTGHKKRGFHCESSAH------------WPIFKWSHD-GKFFARMTLDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPE--DKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQGVVTNFEIFRMREKQVPVDVVEM---KETIIAFAWEPNGSKFAVLHGEAPRISVSFYHVK 578
BLAST of CX288485 vs. ExPASy Swiss-Prot
Match: EIF3B_MOUSE (Eukaryotic translation initiation factor 3 subunit B OS=Mus musculus GN=Eif3b PE=1 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 5.536e-48 Identity = 92/208 (44.23%), Postives = 139/208 (66.83%), Query Frame = 1 Query: 13 IFDVRTGKVMRDFKGSADEFXXXXXXXXXXXSWPVFRWGGGKDKYFAKLGKNMISVYETESFTLIDKKSLKVENVMDFSWSPTDPIISLFVPELGGGNQPARVSLVQIPSKEELRQKNLFSVSDCKMYWQSSGDYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHGDSPRPDISFYSMR 636 I+D+ TG R F + WP+F+W K+FA++ + +S+YET S L+DKKSLK+ + DFSWSP II+ +VPE + PARV+L+Q+P+++E+R +NLF+V DCK++WQ +GDYL VKVDR K + T FE+FR++E+ +P++V+E+ + IIAFAWEP G +FAV+HG++PR +SFY ++ Sbjct: 395 IWDILTGHKKRGFHCESSAH------------WPIFKWSHD-GKFFARMTLDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPE--DKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQGVVTNFEIFRMREKQVPVDVVEM---KETIIAFAWEPNGSKFAVLHGEAPRISVSFYHVK 584
BLAST of CX288485 vs. ExPASy Swiss-Prot
Match: EIF3B_HUMAN (Eukaryotic translation initiation factor 3 subunit B OS=Homo sapiens GN=EIF3B PE=1 SV=3) HSP 1 Score: 190.66 bits (483), Expect = 5.536e-48 Identity = 92/208 (44.23%), Postives = 139/208 (66.83%), Query Frame = 1 Query: 13 IFDVRTGKVMRDFKGSADEFXXXXXXXXXXXSWPVFRWGGGKDKYFAKLGKNMISVYETESFTLIDKKSLKVENVMDFSWSPTDPIISLFVPELGGGNQPARVSLVQIPSKEELRQKNLFSVSDCKMYWQSSGDYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHGDSPRPDISFYSMR 636 I+D+ TG R F + WP+F+W K+FA++ + +S+YET S L+DKKSLK+ + DFSWSP II+ +VPE + PARV+L+Q+P+++E+R +NLF+V DCK++WQ +GDYL VKVDR K + T FE+FR++E+ +P++V+E+ + IIAFAWEP G +FAV+HG++PR +SFY ++ Sbjct: 406 IWDILTGHKKRGFHCESSAH------------WPIFKWSHD-GKFFARMTLDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPE--DKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQGVVTNFEIFRMREKQVPVDVVEM---KETIIAFAWEPNGSKFAVLHGEAPRISVSFYHVK 595
BLAST of CX288485 vs. ExPASy Swiss-Prot
Match: EIF3B_AEDAE (Eukaryotic translation initiation factor 3 subunit B OS=Aedes aegypti GN=eIF3-S9 PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.233e-47 Identity = 98/218 (44.95%), Postives = 139/218 (63.76%), Query Frame = 1 Query: 13 IFDVRTGKVMRDFKGSADEFXXXXXXXXXXXSWPVFRWGGGKDKYFAKLGKNMISVYETESFTLIDKKSLKVENVMDFSWSPTDPIISLFVPELGGGNQPARVSLVQIPSKEELRQKNLFSVSDCKMYWQSSGDYLAVKVDRYTKTKK----------STYTGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHGDSPRPDISFYSMR 636 I+D+RTG R F + +FRW DKY A++G N I VYET +F L+DKKS+KV+ + +FSWSPTD II+ ++ E PARV+L++IP K E+R KNLF+V+DCK++WQ SGDYL VKVDRY+K+KK + FE+F ++E+DIP++ +E+ + I+AFAWEP G +FA+IHGD ++SFY + Sbjct: 276 IWDIRTGTEKRSFISDGTS------------NMSMFRWSHD-DKYVARMGDNAIHVYETSTFYLLDKKSIKVQGIRNFSWSPTDNIIAYWMSE--DLEAPARVTLLEIPRKNEIRNKNLFNVADCKIHWQKSGDYLCVKVDRYSKSKKDKKDADVKFLGMFYNFEIFHMREKDIPVDSVEV---KETILAFAWEPVGSKFAIIHGDPASANVSFYEAK 475
BLAST of CX288485 vs. ExPASy Swiss-Prot
Match: EIF3B_XENLA (Eukaryotic translation initiation factor 3 subunit B OS=Xenopus laevis GN=eif3b PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.611e-47 Identity = 87/176 (49.43%), Postives = 129/176 (73.30%), Query Frame = 1 Query: 109 WPVFRWGGGKDKYFAKLGKNMISVYETESFTLIDKKSLKVENVMDFSWSPTDPIISLFVPELGGGNQPARVSLVQIPSKEELRQKNLFSVSDCKMYWQSSGDYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHGDSPRPDISFYSMR 636 WP+F+W K+FA++ + +S+YET S L+DKKSLK+ + DFSWSP II+ +VPE + PARV+L+Q+P+++E+R +NLF+V DCK++WQ +GDYL VKVDR K + T FE+FR++E+ +P++V+E+ D IIAFAWEP G +FAV+HG+ PR +SFY ++ Sbjct: 302 WPIFKWSHD-GKFFARMTLDTLSIYETPSMGLLDKKSLKITGIKDFSWSPGGNIIAFWVPE--DKDIPARVTLMQMPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQGMVTNFEIFRMREKQVPVDVVEM---KDGIIAFAWEPNGSKFAVLHGEVPRISVSFYHVK 471
BLAST of CX288485 vs. ExPASy Swiss-Prot
Match: EIF3B_SCHPO (Eukaryotic translation initiation factor 3 subunit B OS=Schizosaccharomyces pombe GN=SPAC25G10.08 PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.104e-47 Identity = 99/228 (43.42%), Postives = 146/228 (64.04%), Query Frame = 1 Query: 13 IFDVRTGKVMRDFK------GSADEFXXXXXXXXXXXSWPVFRWGGGKDKYFAKLGKNM-ISVYETESFTLIDKKSLKVENVMDFSWSPT---------DPIISLFVPELGGGNQPARVSLVQIPSKEELRQKNLFSVSDCKMYWQSSGDYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVI-------HGDSPRPDISFY 627 ++D+ +G+++R FK GS D WP+F+W DKY A++ ISVYET S L+DKK++K++ V +F W P + +++ + PE+ NQPARV+L+ IPSK +R KNLF+VSDCK+YWQS+GDYL VKVDR+TKTKKST++ E+FRI+E++IP+EV++L D ++ FAWEPK RFA+I + + + ++SFY Sbjct: 281 VWDIASGRILRSFKIPPQPEGSKD---------GKKVIWPIFKWSAD-DKYLARVTVGQSISVYETPSLALVDKKTIKIDGVQNFEWCPVSDALGRDSKEQLLAYWTPEIT--NQPARVALISIPSKSTIRTKNLFNVSDCKLYWQSNGDYLCVKVDRHTKTKKSTFSNLEIFRIREKNIPVEVVDL---KDVVLNFAWEPKSDRFAIISANDQVLNSTNVKTNLSFY 493 The following BLAST results are available for this feature:
BLAST of CX288485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288485 ID=CX288485; Name=CX288485; organism=Citrus clementina; type=EST; length=638bpback to top |