CX288527
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288527 vs. ExPASy Swiss-Prot
Match: RUBB_ARATH (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Arabidopsis thaliana GN=At1g55490 PE=1 SV=3) HSP 1 Score: 282.722 bits (722), Expect = 2.614e-90 Identity = 149/175 (85.14%), Postives = 157/175 (89.71%), Query Frame = 3 Query: 3 LRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 527 LRG LKIAAL+APGFGERKSQYLDDIAILTG TVIR+EVGL+LDK GKEVLGNASKVVLTK+T+TIVGDGSTQDAV KRV QI+ LIE AEQDYE+EKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAA CTLLRL+SKVDAIK TLDNDEEKVG Sbjct: 321 LRGTLKIAALRAPGFGERKSQYLDDIAILTGATVIREEVGLSLDKAGKEVLGNASKVVLTKETSTIVGDGSTQDAVKKRVTQIKNLIEQAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKATLDNDEEKVG 495 HSP 2 Score: 70.8626 bits (172), Expect = 2.614e-90 Identity = 35/44 (79.55%), Postives = 41/44 (93.18%), Query Frame = 1 Query: 514 KKRLEADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYG 645 ++++ ADIVKRAL YPLKLIAKNAGVNGSVVSEKVLS+DN K+G Sbjct: 491 EEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNVKFG 534
BLAST of CX288527 vs. ExPASy Swiss-Prot
Match: RUBB_PEA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 276.174 bits (705), Expect = 2.859e-89 Identity = 146/175 (83.43%), Postives = 158/175 (90.29%), Query Frame = 3 Query: 3 LRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 527 LRG+LKIAALKAPGFGERKSQYLDDIAILTGGTVIR+EVGL LDK KEVLGNA+KVVLTKDTTTIVGDGSTQ+AV+KRV+QI+ IE AEQ+YE+EKL+ERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAA CTLLRL+SKVDAIK+TL NDEEKVG Sbjct: 315 LRGSLKIAALKAPGFGERKSQYLDDIAILTGGTVIREEVGLTLDKADKEVLGNAAKVVLTKDTTTIVGDGSTQEAVNKRVSQIKNQIEAAEQEYEKEKLSERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKDTLANDEEKVG 489 HSP 2 Score: 73.9442 bits (180), Expect = 2.859e-89 Identity = 37/44 (84.09%), Postives = 41/44 (93.18%), Query Frame = 1 Query: 514 KKRLEADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYG 645 ++++ ADIVKRAL YPLKLIAKNAGVNGSVVSEKVLSSDN KYG Sbjct: 485 EEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKYG 528
BLAST of CX288527 vs. ExPASy Swiss-Prot
Match: RUBB_BRANA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 3.730e-89 Identity = 147/175 (84.00%), Postives = 156/175 (89.14%), Query Frame = 3 Query: 3 LRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 527 LRG LKIAALKAPGFGERKSQYLDDIAILTG TVIR+EVGL+LDK GKEVLG+A+KVVLTK+T+TIVGDGSTQDAV KRV QI+ LIE AEQDYE+EKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAA CTLLRL+SKVDAIK LDNDEEKVG Sbjct: 321 LRGTLKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGLSLDKAGKEVLGHAAKVVLTKETSTIVGDGSTQDAVQKRVTQIKNLIEQAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKAALDNDEEKVG 495 HSP 2 Score: 70.8626 bits (172), Expect = 3.730e-89 Identity = 35/44 (79.55%), Postives = 41/44 (93.18%), Query Frame = 1 Query: 514 KKRLEADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYG 645 ++++ ADIVKRAL YPLKLIAKNAGVNGSVVSEKVLS+DN K+G Sbjct: 491 EEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNVKFG 534
BLAST of CX288527 vs. ExPASy Swiss-Prot
Match: RUBB_SECCE (RuBisCO large subunit-binding protein subunit beta, chloroplastic (Fragment) OS=Secale cereale GN=CPN60 PE=2 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 2.131e-71 Identity = 140/189 (74.07%), Postives = 160/189 (84.66%), Query Frame = 3 Query: 3 LRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGGRYC*KSSVLPTEI 569 LRG+LKI A+KAPGFGERK+QYLDDIAILTGGTVIRDEVGL LDK VLG A+KVVLTK++TTIVGDGSTQ+ V+KRVAQI+ LIE AEQDYE+EKLNERIAKL+GGVAVIQVGAQTETELKEKKLRVEDALNATKAA CTLLRL++KVDAIK+TL+NDE+KVG ++ P ++ Sbjct: 220 LRGSLKICAIKAPGFGERKTQYLDDIAILTGGTVIRDEVGLTLDKADNTVLGTAAKVVLTKESTTIVGDGSTQEEVTKRVAQIKNLIEAAEQDYEKEKLNERIAKLAGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKVDAIKDTLENDEQKVGAEIVRRALCYPLKL 408 HSP 2 Score: 71.633 bits (174), Expect = 3.860e-12 Identity = 33/44 (75.00%), Postives = 42/44 (95.45%), Query Frame = 1 Query: 514 KKRLEADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYG 645 ++++ A+IV+RALCYPLKLIAKNAGVNGSVV+EKVLS+DN K+G Sbjct: 390 EQKVGAEIVRRALCYPLKLIAKNAGVNGSVVTEKVLSNDNFKFG 433
BLAST of CX288527 vs. ExPASy Swiss-Prot
Match: RUBB_CHLRE (RuBisCO large subunit-binding protein subunit beta-1 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 3.901e-57 Identity = 114/192 (59.38%), Postives = 143/192 (74.48%), Query Frame = 3 Query: 3 LRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGGRYC*KSSVLPTEINCQ 578 LRG LK+ A+KAPGFGER+S YL+DIAILTGGTV+ DE+G++L++ VLG A+K+ +TK+ TT+VGDGST V+ RV QIR L +QDYEREKL ERIA+LSGGVA+IQVGAQTETELKEKKLRVEDALNAT+AA CTLLRLS KVD IK + + E+++G ++ P ++ Q Sbjct: 151 LRGTLKVVAIKAPGFGERRSSYLEDIAILTGGTVVGDEMGVSLEQATDAVLGTAAKITITKERTTVVGDGSTAADVAARVKQIRNLQMQTDQDYEREKLQERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNATRAAVEEGVVPGGGCTLLRLSEKVDVIKRRMTDPEQQMGADIIKRALCYPIKLIAQ 342
BLAST of CX288527 vs. ExPASy Swiss-Prot
Match: CH601_TRIEI (60 kDa chaperonin 1 OS=Trichodesmium erythraeum (strain IMS101) GN=groL1 PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.619e-56 Identity = 98/174 (56.32%), Postives = 131/174 (75.29%), Query Frame = 3 Query: 6 RGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 527 RG L +AA+KAPGFG+R+ L DIAILTGG +I +EVGL+L+ V +++G K+ + KD TTIV DG T + V KR+AQIR + ++ DY++EKL ERIAKL+GGVAVI+VGA TETELK++KLR+EDALNATKAA TL+ LS+KV+ +K +L+N+EEK+G Sbjct: 266 RGVLNVAAVKAPGFGDRRKAMLQDIAILTGGQLISEEVGLSLEMVDLDMMGIGRKISINKDNTTIVADGGTAEEVKKRIAQIRKQLGESDSDYDKEKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVEEGIVPGGGTTLIHLSTKVEELKGSLNNEEEKIG 439 HSP 2 Score: 44.2838 bits (103), Expect = 1.619e-56 Identity = 22/39 (56.41%), Postives = 30/39 (76.92%), Query Frame = 1 Query: 514 KKRLEADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD 630 ++++ ADIV+RAL PL IA N+GV GSV+ EKV S+D Sbjct: 435 EEKIGADIVRRALEAPLNQIANNSGVEGSVIVEKVRSTD 473
BLAST of CX288527 vs. ExPASy Swiss-Prot
Match: CH602_ANAVT (60 kDa chaperonin 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL2 PE=3 SV=2) HSP 1 Score: 189.119 bits (479), Expect = 4.243e-54 Identity = 97/174 (55.75%), Postives = 125/174 (71.84%), Query Frame = 3 Query: 6 RGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 527 RG L +AA+KAPGFGER+ L DIAILT G +I +E+GL+LD E LG A K+ + KD TTIV +T+ + KR+AQIR +E + +Y+ EKL ERIAKL+GG+AVI+VGA TETELK++KLR+EDALNATKAA TL+ L+SKVD IK+ D +EEK+G Sbjct: 266 RGVLSVAAIKAPGFGERRKALLQDIAILTDGQLISEEIGLSLDTASLEALGTAQKITIEKDNTTIVAGNTTKPEIQKRIAQIRRQLEETDSEYDSEKLQERIAKLAGGIAVIKVGAATETELKDRKLRIEDALNATKAAVAEGIVPGGGKTLIYLASKVDEIKKNFD-EEEKIG 438 HSP 2 Score: 43.5134 bits (101), Expect = 4.243e-54 Identity = 22/39 (56.41%), Postives = 29/39 (74.36%), Query Frame = 1 Query: 514 KKRLEADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD 630 ++++ ADIVKRAL PL+ IA NAGV GSV+ +V SD Sbjct: 434 EEKIGADIVKRALEAPLRQIADNAGVEGSVIVSRVKDSD 472
BLAST of CX288527 vs. ExPASy Swiss-Prot
Match: CH602_ANASP (60 kDa chaperonin 2 OS=Anabaena sp. (strain PCC 7120) GN=groL2 PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.225e-53 Identity = 97/174 (55.75%), Postives = 125/174 (71.84%), Query Frame = 3 Query: 6 RGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 527 RG L +AA+KAPGFGER+ L DIAILT G +I +E+GL+LD E LG A K+ + KD TTIV +T+ + KR+AQIR +E + +Y+ EKL ERIAKL+GG+AVI+VGA TETELK++KLR+EDALNATKAA TL+ L+SKVD IK+ D +EEK+G Sbjct: 266 RGVLSVAAIKAPGFGERRKALLQDIAILTDGQLISEEIGLSLDTASLEALGTAQKITIEKDNTTIVAGNTTKPEIQKRIAQIRRQLEETDSEYDSEKLQERIAKLAGGIAVIKVGAATETELKDRKLRIEDALNATKAAVAEGIVPGGGKTLIYLASKVDEIKKNFD-EEEKIG 438 HSP 2 Score: 41.9726 bits (97), Expect = 1.225e-53 Identity = 21/39 (53.85%), Postives = 28/39 (71.79%), Query Frame = 1 Query: 514 KKRLEADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD 630 ++++ ADIVKRAL PL+ IA NAG GSV+ +V SD Sbjct: 434 EEKIGADIVKRALEAPLRQIADNAGAEGSVIVSRVKDSD 472
BLAST of CX288527 vs. ExPASy Swiss-Prot
Match: RUBC_CHLRE (RuBisCO large subunit-binding protein subunit beta-2 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 3.418e-53 Identity = 107/156 (68.59%), Postives = 126/156 (80.77%), Query Frame = 3 Query: 60 SQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVG 527 S YL+DIAILTGGTV++DE+G+ L+K +EVLG A+KV ++K+ TTIVGDG TQ V RV QIR L EQ+YE+EKLNERIA+LSGGVA+IQVGAQTETELKEKKLRVEDALNATKAA CTLLRLS KVD+IKETL N+E+K+G Sbjct: 1 SSYLEDIAILTGGTVVKDELGITLEKATEEVLGLAAKVSISKEATTIVGDGRTQQQVEGRVKQIRNLAAETEQEYEKEKLNERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVIGGGCTLLRLSQKVDSIKETLSNEEQKMG 156
BLAST of CX288527 vs. ExPASy Swiss-Prot
Match: CH602_GLOVI (60 kDa chaperonin 2 OS=Gloeobacter violaceus GN=groL2 PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 8.518e-52 Identity = 96/172 (55.81%), Postives = 124/172 (72.09%), Query Frame = 3 Query: 3 LRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEE 518 LRG L A+KAPGFG+R+ L DIA+LTGG VI +++GL L+ V ++LG A KV +TKD TTIV + AV KR+AQI +E+ + D++REKL ER+AKL+GGVAVI+VGA TETELK++KLR+EDALNATKAA TLL L+ K+DAIK L +DE+ Sbjct: 266 LRGVLNCVAVKAPGFGDRRKAMLQDIAVLTGGDVISEDIGLKLENVTIDMLGKARKVTITKDKTTIVAGTDNKAAVEKRIAQIHKQMEDTDSDFDREKLQERLAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVEEGIVPGGGTTLLHLTKKIDAIKAGLADDEK 437 HSP 2 Score: 39.2762 bits (90), Expect = 8.518e-52 Identity = 19/34 (55.88%), Postives = 25/34 (73.53%), Query Frame = 1 Query: 529 ADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD 630 AD++ RAL PL+ IA NAGV GSV+++KV D Sbjct: 440 ADLIARALEAPLRQIADNAGVEGSVIAQKVRELD 473 The following BLAST results are available for this feature:
BLAST of CX288527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288527 ID=CX288527; Name=CX288527; organism=Citrus clementina; type=EST; length=646bpback to top |