CX288569

Overview
NameCX288569
Unique NameCX288569
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length617
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288569 vs. ExPASy Swiss-Prot
Match: GSOX5_ARATH (Flavin-containing monooxygenase FMO GS-OX5 OS=Arabidopsis thaliana GN=FMOGS-OX5 PE=2 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 3.018e-48
Identity = 85/152 (55.92%), Postives = 110/152 (72.37%), Query Frame = 1
Query:    1 YHFPFLETNGIVTMDDNRVGPLYKHVFPPVLAPWLSFVGLPWKVIPFPLCEYQSKWIAGVLSGQIVLPSQEEMMEDIKGFYSTLEASGTPKRYTHNMGDYQFDYDNWLAEQCGYLGVEEWRKQMYNDVSKNRHTRPETYRDEWDDHHLVLQA 456
            YHFPFL TNG +T++DN VGPLY+HVFPP LAP LSF+GLPW  + F + E QSKW+A  LSG++ LPS+E+MMED+  +Y+  EA G PKRYTH +G  Q DY NW+AEQ G    E+WR Q  N       T+ +T+RD+WDD HL+++A
Sbjct:  288 YHFPFLNTNGYITVEDNCVGPLYEHVFPPALAPGLSFIGLPWMTLQFFMFELQSKWVAAALSGRVTLPSEEKMMEDVTAYYAKREAFGQPKRYTHRLGGGQVDYLNWIAEQIGAPPGEQWRYQEINGGYYRLATQSDTFRDKWDDDHLIVEA 439          
BLAST of CX288569 vs. ExPASy Swiss-Prot
Match: GSOX4_ARATH (Flavin-containing monooxygenase FMO GS-OX4 OS=Arabidopsis thaliana GN=FMOGS-OX4 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.079e-45
Identity = 85/161 (52.80%), Postives = 112/161 (69.57%), Query Frame = 1
Query:    1 YHFPFLETNGIVTMDDNRVGPLYKHVFPPVLAPWLSFVGLPWKVIPFPLCEYQSKWIAGVLSGQIVLPSQEEMMEDIKGFYSTLEASGTPKRYTHNMGDYQFDYDNWLAEQCGYLGVEEWRKQMYNDVSKNRHTRPETYRDEWDDHHLVLQAPGGFHQVHL 483
            Y+FPFLETN  + +DDNRV PLYKH+FPP LAP LSF+GLP   + F + E QSKW+A VLSG++ LPS +EMM+D+K  Y T EA G PKRYTH +G  Q +Y +W+A+ CG+  VE WR Q      +    +PET+RDEWDD  L+ +A   F +++L
Sbjct:  288 YYFPFLETNNYMRVDDNRVEPLYKHIFPPALAPGLSFIGLPAMGLQFYMFEVQSKWVAAVLSGRVTLPSVDEMMDDLKLSYETQEALGIPKRYTHKLGKSQCEYLDWIADLCGFPHVEHWRDQEVTRGYQRLGNQPETFRDEWDDDDLMEEAYEDFARLNL 448          
BLAST of CX288569 vs. ExPASy Swiss-Prot
Match: GSOX2_ARATH (Flavin-containing monooxygenase FMO GS-OX2 OS=Arabidopsis thaliana GN=FMOGS-OX2 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.312e-43
Identity = 83/152 (54.61%), Postives = 108/152 (71.05%), Query Frame = 1
Query:    1 YHFPFLETNGIVTMDDNRVGPLYKHVFPPVLAPWLSFVGLPWKVIPFPLCEYQSKWIAGVLSGQIVLPSQEEMMEDIKGFYSTLEASGTPKRYTHNMGDYQFDYDNWLAEQCGYLGVEEWRKQMYNDVSKNRHTRPETYRDEWDDHHLVLQA 456
            Y F FLETNG + +D+NRV  LYKHVFPP L+P LSFVGLP   I F + E QSKW+A VLS ++ LP++++MMEDI  +Y++L+A G PKRYTH +G  Q +Y NW+AE+CG   VE WR Q      +   + PETYRDEWDD+ L+ +A
Sbjct:  288 YRFTFLETNGYMNIDENRVEHLYKHVFPPALSPGLSFVGLPSMGIQFVMFEIQSKWVAAVLSRRVTLPTEDKMMEDISAWYASLDAVGIPKRYTHKLGKIQSEYLNWVAEECGCPLVEHWRNQQIVRGYQRLVSHPETYRDEWDDNDLMEEA 439          
BLAST of CX288569 vs. ExPASy Swiss-Prot
Match: GSOX1_ARATH (Flavin-containing monooxygenase FMO GS-OX1 OS=Arabidopsis thaliana GN=FMOGS-OX1 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.312e-43
Identity = 82/152 (53.95%), Postives = 107/152 (70.39%), Query Frame = 1
Query:    1 YHFPFLETNGIVTMDDNRVGPLYKHVFPPVLAPWLSFVGLPWKVIPFPLCEYQSKWIAGVLSGQIVLPSQEEMMEDIKGFYSTLEASGTPKRYTHNMGDYQFDYDNWLAEQCGYLGVEEWRKQMYNDVSKNRHTRPETYRDEWDDHHLVLQA 456
            Y+FPFLETNG + +++NRV PLYKHVF P LAP LSF+GLP   I F + E QSKW+A VLSG+++LPSQ++MMEDI  +Y+TL+  G PKR+TH +G    +Y NW+AE+C    VE WR Q      +   + PE YRDEWDD  L+ +A
Sbjct:  288 YYFPFLETNGYININENRVEPLYKHVFLPALAPSLSFIGLPGMAIQFVMFEIQSKWVAAVLSGRVILPSQDKMMEDIIEWYATLDVLGIPKRHTHKLGKISCEYLNWIAEECHCSPVENWRIQEVERGFQRMVSHPEIYRDEWDDDDLMEEA 439          
BLAST of CX288569 vs. ExPASy Swiss-Prot
Match: GSOX3_ARATH (Flavin-containing monooxygenase FMO GS-OX3 OS=Arabidopsis thaliana GN=FMOGS-OX3 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.238e-43
Identity = 85/161 (52.80%), Postives = 110/161 (68.32%), Query Frame = 1
Query:    1 YHFPFLETNGIVTMDDNRVGPLYKHVFPPVLAPWLSFVGLPWKVIPFPLCEYQSKWIAGVLSGQIVLPSQEEMMEDIKGFYSTLEASGTPKRYTHNMGDYQFDYDNWLAEQCGYLGVEEWRKQMYNDVSKNRHTRPETYRDEWDDHHLVLQAPGGFHQVHL 483
            Y+FPFLETNG + +D+ RV PLYKHVFPP LAP L+FVGLP   I F + E QSKW+A VLSG++ LPS ++MMEDI  +Y++L+A G PKR+TH +G  Q +Y NW+A++ G   VE WR Q  +         PETYRDEWDD  L+ +A   F +  L
Sbjct:  289 YNFPFLETNGYLRIDEKRVEPLYKHVFPPALAPGLAFVGLPAMGIVFVMFEIQSKWVAAVLSGRVTLPSTDKMMEDINAWYASLDALGIPKRHTHTIGRIQSEYLNWVAKESGCELVERWRGQEVDGGYLRLVAHPETYRDEWDDDELIEEAYNDFSRKKL 449          
The following BLAST results are available for this feature:
BLAST of CX288569 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
GSOX5_ARATH3.018e-4855.92Flavin-containing monooxygenase FMO GS-OX5 OS=Arab... [more]
GSOX4_ARATH4.079e-4552.80Flavin-containing monooxygenase FMO GS-OX4 OS=Arab... [more]
GSOX2_ARATH1.312e-4354.61Flavin-containing monooxygenase FMO GS-OX2 OS=Arab... [more]
GSOX1_ARATH1.312e-4353.95Flavin-containing monooxygenase FMO GS-OX1 OS=Arab... [more]
GSOX3_ARATH2.238e-4352.80Flavin-containing monooxygenase FMO GS-OX3 OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionC02001H05SK IF1 Citrus clementina cDNA clone C02001H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288569 ID=CX288569; Name=CX288569; organism=Citrus clementina; type=EST; length=617bp
TATCACTTCCCATTTCTTGAAACCAATGGCATTGTGACTATGGATGATAA
TCGGGTGGGGCCACTGTACAAGCATGTTTTTCCGCCAGTCTTGGCCCCAT
GGCTTTCTTTTGTTGGTTTACCCTGGAAGGTTATCCCCTTTCCCCTGTGT
GAATATCAAAGCAAGTGGATTGCTGGTGTTTTGTCTGGTCAGATTGTGCT
ACCTTCTCAAGAAGAGATGATGGAAGACATTAAAGGCTTTTACTCAACTC
TTGAAGCTTCTGGAACACCTAAGAGATACACTCATAACATGGGTGATTAC
CAGTTTGATTATGACAATTGGCTAGCTGAACAATGCGGGTATCTTGGTGT
CGAAGAATGGAGAAAGCAAATGTATAATGATGTTTCCAAGAATAGACATA
CAAGACCAGAGACATATCGTGATGAATGGGACGATCACCACCTGGTTTTG
CAAGCCCCAGGAGGATTTCATCAAGTACACCTCACATAGAGTAACAAGTA
AATATTGAGCTGAAAGTGGTAACCTCTCACTCAAGGTTCACACCAAATCC
AATTTAACTAGCTGTATATGTTCATATTAAGAAAGGAAATGTCTTGTTAT
CTACGCGTACAGACTAC
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