CX288751

Overview
NameCX288751
Unique NameCX288751
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length461
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX288751 vs. ExPASy Swiss-Prot
Match: WAX2_ARATH (Protein WAX2 OS=Arabidopsis thaliana GN=WAX2 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.138e-19
Identity = 60/154 (38.96%), Postives = 85/154 (55.19%), Query Frame = 3 
Query:   12 IPKGTTQVVLRGALTKVAYAIAFALCQKGIQVV--TLREDEHEKLRKSFGAKSECNNLLLSRSYSQ----KIWLVGKGLTEEEQSKAKKGTIFIPFSQFPPNDKKIRKDCMYHLTPAMAVPAAFENVDSCENWLPRRVMSAWRIGGIVHALEGW 455
            IPK   +V L GA +K+  AIA  LC++G++V+  TL  +  +K++K    + + NNL+    Y+     K W+VGK LT  EQS A  GT F  F    P   K R++C Y    AM +P   E + +CE  + R V+ A   GG+VH LEGW
Sbjct:  449 IPKDVNEVFLTGATSKLGRAIALYLCRRGVRVLMLTLSMERFQKIQKEAPVEFQ-NNLVQVTKYNAAQHCKTWIVGKWLTPREQSWAPAGTHFHQF--VVPPILKFRRNCTYGDLAAMKLPKDVEGLGTCEYTMERGVVHACHAGGVVHMLEGW 599
The following BLAST results are available for this feature:
BLAST of CX288751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WAX2_ARATH1.138e-1938.96Protein WAX2 OS=Arabidopsis thaliana GN=WAX2 PE=1 ... [more]
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Properties
Property NameValue
Genbank descriptionC02004A06SK IF1 Citrus clementina cDNA clone C02004A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288751 ID=CX288751; Name=CX288751; organism=Citrus clementina; type=EST; length=461bp
TGATAAACAGCATACCAAAGGGAACAACACAAGTGGTCCTTAGAGGCGCT
CTCACAAAGGTCGCTTATGCCATTGCCTTTGCCTTATGCCAAAAGGGCAT
CCAGGTTGTAACATTACGTGAGGATGAGCACGAGAAGCTTAGAAAATCAT
TTGGGGCCAAATCTGAATGTAATAATTTGCTTCTCTCGAGAAGCTACTCC
CAAAAGATATGGTTGGTGGGAAAAGGGCTGACTGAAGAAGAACAATCCAA
GGCTAAAAAGGGAACAATCTTCATTCCTTTCTCACAGTTTCCACCAAATG
ATAAGAAAATACGTAAAGACTGTATGTACCATCTCACTCCAGCAATGGCC
GTTCCTGCTGCTTTTGAGAATGTGGACTCGTGCGAGAATTGGTTGCCAAG
AAGAGTGATGAGTGCATGGCGAATTGGGGGAATAGTGCATGCCTTGGAAG
GATGGAACGAA
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