CX288805
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288805 vs. ExPASy Swiss-Prot
Match: UXS1_RAT (UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 3.180e-51 Identity = 97/168 (57.74%), Postives = 123/168 (73.21%), Query Frame = 3 Query: 18 RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKI*FRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVKDFRQRI 521 R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM P NLGNP E T+LE AQ+++ + ++I F +DDP KRKPDI +AK +LGWEP V L +GL K + FR+ + Sbjct: 228 RACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395
BLAST of CX288805 vs. ExPASy Swiss-Prot
Match: UXS1_PONAB (UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 3.180e-51 Identity = 97/168 (57.74%), Postives = 123/168 (73.21%), Query Frame = 3 Query: 18 RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKI*FRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVKDFRQRI 521 R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM P NLGNP E T+LE AQ+++ + ++I F +DDP KRKPDI +AK +LGWEP V L +GL K + FR+ + Sbjct: 228 RACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395
BLAST of CX288805 vs. ExPASy Swiss-Prot
Match: UXS1_MOUSE (UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 3.180e-51 Identity = 97/168 (57.74%), Postives = 123/168 (73.21%), Query Frame = 3 Query: 18 RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKI*FRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVKDFRQRI 521 R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM P NLGNP E T+LE AQ+++ + ++I F +DDP KRKPDI +AK +LGWEP V L +GL K + FR+ + Sbjct: 228 RACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395
BLAST of CX288805 vs. ExPASy Swiss-Prot
Match: UXS1_HUMAN (UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 3.180e-51 Identity = 97/168 (57.74%), Postives = 123/168 (73.21%), Query Frame = 3 Query: 18 RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKI*FRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVKDFRQRI 521 R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM P NLGNP E T+LE AQ+++ + ++I F +DDP KRKPDI +AK +LGWEP V L +GL K + FR+ + Sbjct: 228 RACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395
BLAST of CX288805 vs. ExPASy Swiss-Prot
Match: UXS1_DANRE (UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 6.631e-49 Identity = 94/168 (55.95%), Postives = 121/168 (72.02%), Query Frame = 3 Query: 18 RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKI*FRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVKDFRQRI 521 R+CYDEGKR AET+ Y + GVEVR+ARIFNT+G RM ++DGRVVSNF+ QAL+ E LTVYG G QTR+FQ+VSDLV GL+ LM P NLGNP E T+LE AQ+++ + + I F P +DDP +R+PDI +AK LLGWEP V L +GL K ++ F + + Sbjct: 226 RACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGSRMHMNDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGLVSLMNSNISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLLLGWEPVVPLEEGLNKTIQYFSREL 393
BLAST of CX288805 vs. ExPASy Swiss-Prot
Match: UXS1_XENTR (UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.131e-48 Identity = 92/168 (54.76%), Postives = 123/168 (73.21%), Query Frame = 3 Query: 18 RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKI*FRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVKDFRQRI 521 R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++DGRVVSNF+ QAL+ E LTVYG G+QTR+FQ+VSDLV GL+ LM P NLGNP E ++++ A+++++ + +I F +DDP +RKPDI +AK LLGWEP V L +GL K + FR+ + Sbjct: 229 RACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEQLTVYGSGEQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPQEHSIVQFARLIKQLVGSGGEISFLSEAQDDPQRRKPDIRKAKLLLGWEPVVPLEEGLNKTIHYFRKEL 396
BLAST of CX288805 vs. ExPASy Swiss-Prot
Match: YTCB_BACSU (Uncharacterized UDP-glucose epimerase ytcB OS=Bacillus subtilis GN=ytcB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.349e-17 Identity = 50/158 (31.65%), Postives = 84/158 (53.16%), Query Frame = 3 Query: 21 SCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHV--GPFNLGNPGEFTMLELAQVVQETIDPNAKI*FRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGL 488 S Y K T E L Y + G+ + I R F YGPR D + Q L+++PLT++GDG+Q+R F ++SD V+G+ ++ H+ N+G ++L++ ++++ A + F +P DIS+AK+LL ++P SL+ GL Sbjct: 147 SPYGVTKLTGEKLCHVYKQSFGIPIVILRFFTVYGPRQRPD--MAFHRLIKQHLQQKPLTIFGDGQQSRDFTYISDCVKGITAVLGKPHLIGETVNIGGAERASVLKVVSLIEDISGRKATLHFSDKIAGEPSNTWADISKAKQLLHYDPATSLKDGL 302
BLAST of CX288805 vs. ExPASy Swiss-Prot
Match: GME_ARATH (GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana GN=At5g28840 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.069e-14 Identity = 53/160 (33.12%), Postives = 79/160 (49.38%), Query Frame = 3 Query: 18 RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGR--VVSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKI*FRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGL 488 + Y K E L Y++ G+E RI R N YGP GR + F +A + ++GDG QTRSF F+ + VEG++RL + + P N+G+ +M E+A++V + I P E R D + KE LGW P + L++GL Sbjct: 171 QDAYGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPE-GVRGRNSDNNLIKEKLGWAPNMRLKEGL 329
BLAST of CX288805 vs. ExPASy Swiss-Prot
Match: GME2_ORYSJ (GDP-mannose 3,5-epimerase 2 OS=Oryza sativa subsp. japonica GN=GME-2 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.069e-14 Identity = 53/160 (33.12%), Postives = 78/160 (48.75%), Query Frame = 3 Query: 18 RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGR--VVSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKI*FRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGL 488 + Y K E L Y + G+E R+ R N YGP GR + F +AL + ++GDG QTRSF F+ + VEG++RL + + P N+G+ +M E+A++V + I P E R D + KE LGW P + L+ GL Sbjct: 165 QDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKQLPIHHIPGPE-GVRGRNSDNTLIKEKLGWAPTMRLKDGL 323
BLAST of CX288805 vs. ExPASy Swiss-Prot
Match: GME1_ORYSJ (GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. japonica GN=GME-1 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.823e-14 Identity = 52/160 (32.50%), Postives = 77/160 (48.12%), Query Frame = 3 Query: 18 RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGR--VVSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKI*FRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGL 488 + Y K E L Y + G+E R+ R N YGP GR + F +A + ++GDG QTRSF F+ + VEG++RL + + P N+G+ +M E+A+++ D I P E R D + KE LGW P + L+ GL Sbjct: 172 QDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPGPE-GVRGRNSDNTLIKEKLGWAPTMKLKDGL 330 The following BLAST results are available for this feature:
BLAST of CX288805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288805 ID=CX288805; Name=CX288805; organism=Citrus clementina; type=EST; length=565bpback to top |