CX288808
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288808 vs. ExPASy Swiss-Prot
Match: Y5195_ARATH (UPF0717 protein At5g11950 OS=Arabidopsis thaliana GN=At5g11950 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.421e-34 Identity = 67/103 (65.05%), Postives = 83/103 (80.58%), Query Frame = 3 Query: 3 MARHSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIIVSAPNAKELVQKLEEYVPVHDGVIAKASWEVDK 311 MA+ ++ FIALPGGYGT+EELLE+ITW+QLGIH K VGLLNVDGYYN LL D V++GFIKP RNI+VSAP AKEL++K+EEY P H V + SW+V++ Sbjct: 102 MAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKELMEKMEEYTPSHMHVASHESWKVEE 204
BLAST of CX288808 vs. ExPASy Swiss-Prot
Match: YJF5_YEAST (UPF0717 protein YJL055W OS=Saccharomyces cerevisiae GN=YJL055W PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.992e-20 Identity = 44/87 (50.57%), Postives = 62/87 (71.26%), Query Frame = 3 Query: 3 MARHSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIIVSAPNAKELVQKLEEYV 263 MA SD F+A+PGGYGT EE++E ITW+QLGIH+KP+ L N+DG+Y+ LL F+ ++ + FI II A +E+V K+E+YV Sbjct: 137 MANLSDAFVAMPGGYGTFEEIMECITWSQLGIHNKPIILFNIDGFYDKLLEFLKHSIQERFISVKNGEIIQVASTPQEVVDKIEKYV 223
BLAST of CX288808 vs. ExPASy Swiss-Prot
Match: Y4923_PSEAE (UPF0717 protein PA4923 OS=Pseudomonas aeruginosa GN=PA4923 PE=3 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 8.369e-19 Identity = 44/88 (50.00%), Postives = 59/88 (67.05%), Query Frame = 3 Query: 3 MARHSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIIVSAPNAKELVQKLEEYVP 266 MA +D FIALPGG GTLEEL EV TW QLG H KP+GLL V+G+Y+ LLTF+D VD+ F++ R ++ + + L+ L + P Sbjct: 96 MAELADAFIALPGGLGTLEELFEVWTWGQLGYHAKPLGLLEVNGFYDPLLTFLDHLVDERFVRAEHRGMLQRGASPEALLDALAAWTP 183
BLAST of CX288808 vs. ExPASy Swiss-Prot
Match: YVDD_BACSU (UPF0717 protein yvdD OS=Bacillus subtilis GN=yvdD PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.592e-17 Identity = 36/86 (41.86%), Postives = 59/86 (68.60%), Query Frame = 3 Query: 3 MARHSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIIVSAPNAKELVQKLEEY 260 M+ +D FI++PGG+GT EEL EV+ WAQ+GIH KP+GL NV+GY+ ++ + ++ +GF S +I S+ EL+++++ Y Sbjct: 94 MSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSIQEGFSNESHLKLIHSSSRPDELIEQMQNY 179
BLAST of CX288808 vs. ExPASy Swiss-Prot
Match: FAS6_RHOFA (UPF0717 protein ORF6 in fasciation locus OS=Rhodococcus fascians GN=fas6 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.613e-15 Identity = 37/71 (52.11%), Postives = 50/71 (70.42%), Query Frame = 3 Query: 3 MARHSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIIV 215 MA D FIALPGG GT EE EV+TW+ LG+H+KP LLN + YY LL++I+ A +GFI P+ R+ ++ Sbjct: 113 MAELGDAFIALPGGVGTAEEFFEVLTWSHLGLHNKPCVLLNDNEYYRPLLSYIEHAAVEGFITPATRSRVI 183 The following BLAST results are available for this feature:
BLAST of CX288808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288808 ID=CX288808; Name=CX288808; organism=Citrus clementina; type=EST; length=539bpback to top |