CX288827
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288827 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.273e-31 Identity = 85/202 (42.08%), Postives = 121/202 (59.90%), Query Frame = 1 Query: 4 ELISVTINRTLSELRASSSNCSSIGQSY-PNFNTLEKRAINDCLELFHDTIVELKSALNDLSPKKLPSKHYHDLQTLFSGAMTNQYTCLDGFAYSDGN------------VRDVIKSSLYNISRHVSNSLVMLKKIPGDNMSSKYEVFPEYGRIKR--GFPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVEA 564 EL+ +N+T+S + SSSN S + Q N + + A +DCLEL DT+ +L +A++ L + S H+++ L S AMTN TCLDGFA SD + V + +K SL+NIS HVS+SL ML+ IPG P G++K GFP W+S +DR LLQ V+ TK +L+VA++G+GN+TTI EA+ A Sbjct: 39 ELVVTALNQTISNVNLSSSNFSDLLQRLGSNLSHRDLCAFDDCLELLDDTVFDLTTAISKL---RSHSPELHNVKMLLSAAMTNTRTCLDGFASSDNDENLNNNDNKTYGVAESLKESLFNISSHVSDSLAMLENIPGH--------IP--GKVKEDVGFPMWVSGSDRNLLQDPVDETKVNLVVAQNGTGNYTTIGEAISA 227
BLAST of CX288827 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.484e-27 Identity = 77/197 (39.09%), Postives = 116/197 (58.88%), Query Frame = 1 Query: 1 PELISVTINRTLSELRASSSNCSSIG-QSYPNFNTLEKRAINDCLELFHDTIVELKSALNDLSPKKLPSKHYHDLQTLFSGAMTNQYTCLDGFAYSDG-NVRDV-------IKSSLYNISRHVSNSLVMLKKIPGDNMSSKYEVFPEYGRIKRGFPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVEA 564 PELI +N T+ ++ +SSN S + + +PN E+ A DCL L DTI +L++A++DL L ++D+ L + MT Q TCLDGF+ SD N D+ +K + +IS ++SNSL ML+ I S+ + P+ + +P+WLS ND++LL+ V T ++L VA DG+GNFTTI +AV A Sbjct: 54 PELIIADLNLTILKVNLASSNFSDLQTRLFPNLTHYERCAFEDCLGLLDDTISDLETAVSDLRSSSL---EFNDISMLLTNVMTYQDTCLDGFSTSDNENNNDMTYELPENLKEIILDISNNLSNSLHMLQVI------SRKKPSPKSSEVDVEYPSWLSENDQRLLEAPVQETNYNLSVAIDGTGNFTTINDAVFA 241
BLAST of CX288827 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 5.179e-25 Identity = 70/168 (41.67%), Postives = 100/168 (59.52%), Query Frame = 1 Query: 91 NFNTLEKRAINDCLELFHDTIVELKSALNDLSP---KKLPSKHYHDLQTLFSGAMTNQYTCLDGFAYSDGN--VRDVIKSSLYNISRHVSNSLVMLKKIPGDNM-----SSKYEVFPEYGRIKRGFPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVEA 564 N EK A++DCLE +T+ EL A+ DL KK S+H DL+TL S AMTNQ TCLDGF++ D N VRD + ++ + SN+L M+K + +M S+ ++ E + G+P WLS DR+LLQ S ++T +++VA DGSGNF T+ +V A Sbjct: 129 NLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLIEETSTVD-GWPAWLSTGDRRLLQSS-SVTP-NVVVAADGSGNFKTVAASVAA 293
BLAST of CX288827 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 6.764e-25 Identity = 71/167 (42.51%), Postives = 96/167 (57.49%), Query Frame = 1 Query: 91 NFNTLEKRAINDCLELFHDTIVELKSALNDLSP---KKLPSKHYHDLQTLFSGAMTNQYTCLDGFAYSDGN--VRDVIKSSLYNISRHVSNSLVMLKKIPGDNM----SSKYEVFPEYGRIKRGFPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVEA 564 N EK A++DCLE +T+ EL A+ DL KK S+H DL+TL S AMTNQ TCLDGF++ D N VRD + ++ + SN+L M+K + +M +S E G+P WLS DR+LLQ S ++T + +VA DGSGNF T+ AV A Sbjct: 129 NLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSS-SVTP-NAVVAADGSGNFKTVAAAVAA 293
BLAST of CX288827 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.142e-22 Identity = 65/195 (33.33%), Postives = 110/195 (56.41%), Query Frame = 1 Query: 4 ELISVTINRTLSELRASSSNCSSIGQSYPNFNTLEKRAINDCLELFHDTIVELKSALNDLS---PKKLPSKHYHDLQTLFSGAMTNQYTCLDGFAY--SDGNVRDVIKSSLYNISRHVSNSLVMLKKIPGDNMSSKYEVFPEYGRIK-----RGFPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAV 558 ++I +++N T+ +R + + ++ EK A++DCLE +T+ EL +A+ DL KK +H DL+TL S A+TNQ TCLDGF++ +D VR V+ ++ + SN+L M+ + +++++ ++ K +P WLS DR+LLQ S D++VA DGSG++ T++EAV Sbjct: 98 DVIELSLNITVKAVRRNYYAVKELIKTRKGLTPREKVALHDCLETMDETLDELHTAVEDLELYPNKKSLKEHVEDLKTLISSAITNQETCLDGFSHDEADKKVRKVLLKGQKHVEKMCSNALAMICNMTDTDIANEMKLSAPANNRKLVEDNGEWPEWLSAGDRRLLQSST--VTPDVVVAADGSGDYKTVSEAV 290
BLAST of CX288827 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.194e-21 Identity = 74/207 (35.75%), Postives = 101/207 (48.79%), Query Frame = 1 Query: 4 ELISVTINRTLSELRASSSNCSSIGQSYPNFNTLEKRAINDCLELFHDTIVELKSALNDLS--PK-KLPSKHYHDLQTLFSGAMTNQYTCLDGFAYSDGN--VRDVIKSSLYNISRHVSNSLVMLKK-----IPGDNMSSKYEVFPEYGRIK----------RGFPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVEA 564 E+I ++N T ++ + + E A++DCLE +T+ EL A+ DL PK K KH DL+TL S A+TNQ TCLDGF+Y D + VR + ++ SN+L M+K I + K F K G+P WLS+ DR+LLQ S K D VA DGSG+FTT+ AV A Sbjct: 92 EVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETIDETLDELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMIKNMTETDIANFELRDKSSTFTNNNNRKLKEVTGDLDSDGWPKWLSVGDRRLLQGST--IKADATVADDGSGDFTTVAAAVAA 296
BLAST of CX288827 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 2.660e-21 Identity = 69/215 (32.09%), Postives = 103/215 (47.91%), Query Frame = 1 Query: 4 ELISVTINRTLSELRASSSNCSSIGQSYPNFNTLEKRAINDCLELFHDTIVELKSALNDLS---PKKLPSKHYHDLQTLFSGAMTNQYTCLDGFAYSDGN--VRDVIKSSLYNISRHVSNSLVMLKKIPGD---NMSSKYEVFPEYGRIK--------------------RGFPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVEA 564 ++I ++N T++ + + + + EK A++DCLE +T+ EL + DL KK +H DL+TL S A+TNQ TCLDGF++ D + VR + ++ SN+L M+K + N K ++ ++K G+PTWLS DR+LLQ S K D VA DGSG F T+ AV A Sbjct: 89 DVIEASVNLTITAVEHNYFTVKKLIKKRKGLTPREKTALHDCLETIDETLDELHETVEDLHLYPTKKTLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKALLKGQIHVEHMCSNALAMIKNMTDTDIANFEQKAKITSNNRKLKEENQETTVAVDIAGAGELDSEGWPTWLSAGDRRLLQGSG--VKADATVAADGSGTFKTVAAAVAA 301
BLAST of CX288827 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.510e-16 Identity = 63/195 (32.31%), Postives = 99/195 (50.77%), Query Frame = 1 Query: 4 ELISVTINRTLSELRASSSNCSSIGQSYPNFNTLEKRAINDCLELFHDTIVELKSALNDLSPKKLPSKHYHDLQTLFSGAMTNQYTCLDGF-AYSDGNVRDVIKSSLYNISRHVSNSLVMLKKI-PGDNMSSKYEVFPEYGRIKRG-------FPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVE 561 +LI VT+N TL S + SS S+ + + A + C+EL D++ L AL+ + S D+ T S A+TN TC +GF DG V+D + ++L N+S VSN L + GD+ + P R G FP W+ +R++L+ V+ + D+IV+KDG+G TI+EA++ Sbjct: 118 DLIHVTVNMTLHHF--SHALYSSASLSFVDMPPRARSAYDSCVELLDDSVDALSRALSSVVSS---SAKPQDVTTWLSAALTNHDTCTEGFDGVDDGGVKDHMTAALQNLSELVSNCLAIFSASHDGDDFAG----VPIQNRRLLGVEEREEKFPRWMRPKEREILEMPVSQIQADIIVSKDGNGTCKTISEAIK 303
BLAST of CX288827 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.365e-16 Identity = 61/179 (34.08%), Postives = 88/179 (49.16%), Query Frame = 1 Query: 115 AINDCLELFHDTIVELKSALNDLSPKKLPSKHYHDLQTLFSGAMTNQYTCLDGFAYSDGNVRDVIKSSLY----------NISRHVSNSLVMLKKIP-GDNMSSKYEV--FPEYGRIKRG----------------FPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVEA 564 A+ DCLEL+ DTI +L + P HD QT S A+ NQ TC +GF RD +S Y N+++ +SNSL + K + ++ KY F ++ + + FP+W L+DRKLL+ S K DL+VAKDGSG++T+I +AV A Sbjct: 103 ALFDCLELYEDTIDQLNHSRRSYGQYSSP----HDRQTSLSAAIANQDTCRNGF-------RDFKLTSSYSKYFPVQFHRNLTKSISNSLAVTKAAAEAEAVAEKYPSTGFTKFSKQRSSAGGGSHRRLLLFSDEKFPSWFPLSDRKLLEDSKTTAKADLVVAKDGSGHYTSIQQAVNA 270
BLAST of CX288827 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.395e-16 Identity = 57/159 (35.85%), Postives = 91/159 (57.23%), Query Frame = 1 Query: 97 NTLEKRAINDCLELFHDTIVELKSALNDLSPKKLPS--KHYHDLQTLFSGAMTNQYTCLDGFAYSDGNVRDVIKSSLYNISRHVSNSLVMLKKIPGDNMSSKYEVFPEYGRIKRGFPTWLSLNDRKLLQK-SVNLTKFDLIVAKDGSGNFTTITEAVEA 564 N +K AI C L D E ++LN ++ ++ S K DL++ S M+ Q TCLDGF +GN++ +K+S+ + SNSL ++K +N+S +V + + G P+W+S +DR++L+ V K + VAKDGSG+FTTI +A+ A Sbjct: 168 NQDDKDAIEQCKLLVEDAKEETVASLNKINVTEVNSFEKVVPDLESWLSAVMSYQETCLDGF--EEGNLKSEVKTSVNSSQVLTSNSLALIKTFT-ENLSPVMKVVERH--LLDGIPSWVSNDDRRMLRAVDVKALKPNATVAKDGSGDFTTINDALRA 321 The following BLAST results are available for this feature:
BLAST of CX288827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288827 ID=CX288827; Name=CX288827; organism=Citrus clementina; type=EST; length=564bpback to top |