CX288840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288840 vs. ExPASy Swiss-Prot
Match: UPP_TOBAC (Uracil phosphoribosyltransferase OS=Nicotiana tabacum GN=UPP PE=2 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 5.128e-80 Identity = 140/167 (83.83%), Postives = 156/167 (93.41%), Query Frame = 2 Query: 2 DWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFPGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 502 DWLP ++GEIQSPMGVASVEF+DPREPVA++PILRAGL L EHASSILPA KTYHLGISR+EETLQPS+YLNKLP+KFPEGSR+ VVDPMLATGGT+VAA++L+KE GV+N QIKVI AV APPALQKLSE FPGLHVY GI+DPTVNDKGFI+PGLGDAGDRSFGT Sbjct: 58 DWLPIITGEIQSPMGVASVEFVDPREPVAIVPILRAGLALAEHASSILPATKTYHLGISRNEETLQPSVYLNKLPDKFPEGSRVIVVDPMLATGGTIVAAIDLIKERGVDNSQIKVICAVGAPPALQKLSEKFPGLHVYAGILDPTVNDKGFIIPGLGDAGDRSFGT 224
BLAST of CX288840 vs. ExPASy Swiss-Prot
Match: UPP_SYNY3 (Uracil phosphoribosyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=upp PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 6.533e-51 Identity = 92/166 (55.42%), Postives = 124/166 (74.70%), Query Frame = 2 Query: 5 WLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFPGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 502 WLPTV E+++P+ +A IDP+ P ++PILRAGL LVE A +LP K YHLG+ R+E TL+PS+YLNKLPE+F G+ + ++DPMLATG T++AAL+L+ ++ I+++S VAAP ALQKLS P L +YT +ID +ND+G+IVPGLGDAGDR FGT Sbjct: 51 WLPTVDTEVKTPLAIAKASLIDPQTPFVIVPILRAGLALVEGAQGLLPLAKIYHLGLVRNETTLEPSLYLNKLPERFAPGTHLLLLDPMLATGNTIMAALDLLMARDIDANLIRLVSVVAAPTALQKLSNAHPNLTIYTAMIDEQLNDRGYIVPGLGDAGDRCFGT 216
BLAST of CX288840 vs. ExPASy Swiss-Prot
Match: UPP_SYNP6 (Uracil phosphoribosyltransferase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=upp PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 1.901e-50 Identity = 90/167 (53.89%), Postives = 126/167 (75.45%), Query Frame = 2 Query: 2 DWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFPGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 502 +WLPT+ +Q+P+ EF+D +P+A++PILRAGL LVE +LP + +H+G+ RDE +L+P YLN LPE+ SR+ V+DPMLATGG+++ L+L+++ GV +Q++V+S VAAPPALQKLS+ +P L +Y+ IID +NDKGFIVPGLGDAGDR FGT Sbjct: 50 EWLPTIPAAVQTPLAETPAEFVDFSQPLAIVPILRAGLGLVESVQQVLPTARIFHVGLKRDEVSLEPRCYLNHLPEQLEVNSRVLVLDPMLATGGSLLYTLDLLRDRGVSAEQVRVLSIVAAPPALQKLSQAYPALTIYSAIIDEQLNDKGFIVPGLGDAGDRLFGT 216
BLAST of CX288840 vs. ExPASy Swiss-Prot
Match: UPP_SYNE7 (Uracil phosphoribosyltransferase OS=Synechococcus elongatus (strain PCC 7942) GN=upp PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 1.901e-50 Identity = 90/167 (53.89%), Postives = 126/167 (75.45%), Query Frame = 2 Query: 2 DWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFPGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 502 +WLPT+ +Q+P+ EF+D +P+A++PILRAGL LVE +LP + +H+G+ RDE +L+P YLN LPE+ SR+ V+DPMLATGG+++ L+L+++ GV +Q++V+S VAAPPALQKLS+ +P L +Y+ IID +NDKGFIVPGLGDAGDR FGT Sbjct: 50 EWLPTIPAAVQTPLAETPAEFVDFSQPLAIVPILRAGLGLVESVQQVLPTARIFHVGLKRDEVSLEPRCYLNHLPEQLEVNSRVLVLDPMLATGGSLLYTLDLLRDRGVSAEQVRVLSIVAAPPALQKLSQAYPALTIYSAIIDEQLNDKGFIVPGLGDAGDRLFGT 216
BLAST of CX288840 vs. ExPASy Swiss-Prot
Match: UPP_ANASP (Uracil phosphoribosyltransferase OS=Anabaena sp. (strain PCC 7120) GN=upp PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 3.242e-50 Identity = 94/167 (56.29%), Postives = 125/167 (74.85%), Query Frame = 2 Query: 2 DWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFPGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 502 +WLPT +Q+P+ + I+P+ PVAV+PILRAGL L+E A ++LP YHLG+ R+EETL+ S YLNKLPEKF +R+ + DPMLATGG+++ A++ + E GV+ ++++S VAAPPALQKL+ + GL VYT ID TVND+GFIVPGLGDAGDR FGT Sbjct: 50 EWLPTEETTVQTPLEICPATVINPQVPVAVVPILRAGLGLLEGAQTVLPLASIYHLGLVRNEETLEASCYLNKLPEKFDPQTRVLITDPMLATGGSIMKAMSELTERGVDPSLVRIVSVVAAPPALQKLNAAYSGLIVYTATIDETVNDQGFIVPGLGDAGDRIFGT 216
BLAST of CX288840 vs. ExPASy Swiss-Prot
Match: UPP_DICT6 (Uracil phosphoribosyltransferase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=upp PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 7.012e-37 Identity = 77/165 (46.67%), Postives = 113/165 (68.48%), Query Frame = 2 Query: 8 LPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFPGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 502 LPT E+++P+G+A + +D ++ +A++PILRAGLV+ + ILP+ K H+G+ RD ETL+P Y KLPE + + VVDPMLATGG+ VAA++++K GV K IK + ++AP ++ L + P + +YT ID +ND G+I+PGLGDAGDR FGT Sbjct: 46 LPTKEVEVETPLGIAKGKVLDNKD-LAIVPILRAGLVMADGMLQILPSAKVGHIGLYRDPETLKPVQYYTKLPEDIDK-REVIVVDPMLATGGSAVAAISILKAKGV--KDIKFVCIISAPEGIETLRNSHPDVDIYTAAIDERLNDHGYIIPGLGDAGDRLFGT 206
BLAST of CX288840 vs. ExPASy Swiss-Prot
Match: UPP_DICTD (Uracil phosphoribosyltransferase OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=upp PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 4.545e-36 Identity = 75/165 (45.45%), Postives = 113/165 (68.48%), Query Frame = 2 Query: 8 LPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFPGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 502 LPT E+++P+G+A + ++ ++ +A++PILRAGLV+ E ILP+ K H+G+ RD TL+P Y KLPE + + VVDPMLATGG+ +AA++++K GV+N IK + ++AP ++ L + P + +YT ID +ND G+I+PGLGDAGDR FGT Sbjct: 46 LPTKEVEVETPLGIAKGKVLNNKD-LAIVPILRAGLVMAEGMLRILPSAKVGHIGLYRDPNTLKPVQYYTKLPEDIDK-REVVVVDPMLATGGSAIAAISILKTKGVKN--IKFVCIISAPEGIEALKNSHPDVDIYTAAIDEKLNDHGYIIPGLGDAGDRLFGT 206
BLAST of CX288840 vs. ExPASy Swiss-Prot
Match: UPP_STRMU (Uracil phosphoribosyltransferase OS=Streptococcus mutans GN=upp PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 6.563e-35 Identity = 80/165 (48.48%), Postives = 113/165 (68.48%), Query Frame = 2 Query: 8 LPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFPGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 502 LP EI++P+ +V+ + +A++PILRAG+ +V+ S++PA K H+G+ RDEETL+P YL KLPE + +IFVVDPMLATGG+ V A++ +K+ G N IK + V+AP L+KL E P + +YT +D +N+KG+IVPGLGDAGDR FGT Sbjct: 48 LPLEEVEIETPI-TKTVQKQLTGKKLAIVPILRAGIGMVDGLLSLVPAAKVGHIGMYRDEETLEPVEYLVKLPEDIDQ-RQIFVVDPMLATGGSAVLAIDSLKKRGAAN--IKFVCLVSAPEGLKKLQEAHPDIDIYTAALDEKLNEKGYIVPGLGDAGDRLFGT 208
BLAST of CX288840 vs. ExPASy Swiss-Prot
Match: UPP_STRU0 (Uracil phosphoribosyltransferase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=upp PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 4.254e-34 Identity = 78/165 (47.27%), Postives = 112/165 (67.88%), Query Frame = 2 Query: 8 LPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFPGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 502 LP EIQ+P+ + + ++ +A++PILRAG+ +V+ S++PA K H+G+ RDEETL+P YL KLPE + +IFVVDPMLATGG+ + A++ +K+ G N IK + VAAP ++KL E P + +YT +D +N+ G+IVPGLGDAGDR FGT Sbjct: 48 LPLEDVEIQTPVAKTIQKQLTGKK-LAIVPILRAGIGMVDGFLSLVPAAKVGHIGMYRDEETLEPVEYLVKLPEDIDQ-RQIFVVDPMLATGGSAILAVDSLKKRGAGN--IKFVCLVAAPEGVKKLQEAHPDVDIYTAALDEKLNEHGYIVPGLGDAGDRLFGT 208
BLAST of CX288840 vs. ExPASy Swiss-Prot
Match: UPP_ENTFA (Uracil phosphoribosyltransferase OS=Enterococcus faecalis GN=upp PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 5.556e-34 Identity = 76/165 (46.06%), Postives = 109/165 (66.06%), Query Frame = 2 Query: 8 LPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGISRDEETLQPSIYLNKLPEKFPEGSRIFVVDPMLATGGTVVAALNLVKECGVENKQIKVISAVAAPPALQKLSENFPGLHVYTGIIDPTVNDKGFIVPGLGDAGDRSFGT 502 +P I++PMG ++ + + ++ VA+IPILRAG+ +V+ ++PA K H+G+ RDEETLQP Y KLPE ++FVVDPMLATGG+ + A++ +KE G N IK + VA P ++ L E P + +YT +D +N+ G+IVPGLGDAGDR FGT Sbjct: 48 MPLEDVVIETPMGKSTQKTLSGKK-VAIIPILRAGIGMVDGILELIPAAKVGHVGLYRDEETLQPHEYFVKLPEDI-ASRQLFVVDPMLATGGSAIMAIDSLKERGASN--IKFVCLVAVPEGVKALQEAHPDVDIYTAALDERLNEDGYIVPGLGDAGDRLFGT 208 The following BLAST results are available for this feature:
BLAST of CX288840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288840 ID=CX288840; Name=CX288840; organism=Citrus clementina; type=EST; length=545bpback to top |