CX288856
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288856 vs. ExPASy Swiss-Prot
Match: UBC25_ARATH (Probable ubiquitin carrier protein E2 25 OS=Arabidopsis thaliana GN=UBC25 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.831e-25 Identity = 59/103 (57.28%), Postives = 70/103 (67.96%), Query Frame = 2 Query: 107 EEPIDTPSGEDCSRNKESLDGDDVLMRFKLFKQFDAVEDHSDHYYASNVSSLEQPSNKLVKRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYH 415 E PI P RN E D L + FK+FD VED SDH+YAS ++ +Q S KRIQ+EW+ILE DLP+ IFVR YESRMDLLRAVI+GA+GTPYH Sbjct: 280 EPPILPPDDSRVKRNME-----DYLGLYLFFKRFDIVEDFSDHHYASKGTTSKQHSKDWAKRIQDEWRILEKDLPEMIFVRAYESRMDLLRAVIIGAQGTPYH 377
BLAST of CX288856 vs. ExPASy Swiss-Prot
Match: UBC26_ARATH (Probable ubiquitin carrier protein E2 26 OS=Arabidopsis thaliana GN=UBC26 PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 8.505e-23 Identity = 50/73 (68.49%), Postives = 58/73 (79.45%), Query Frame = 2 Query: 197 FKQFDAVEDHSDHYYASNVSSLEQPSNKLVKRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYH 415 FK+FD VED SDH+YAS S +Q S VK++Q +WKILENDLP+ I VR ESRMDLLRAVI+GAEGTPYH Sbjct: 244 FKRFDTVEDFSDHHYASKGKSSKQHSKNWVKKVQADWKILENDLPEAISVRACESRMDLLRAVIIGAEGTPYH 316
BLAST of CX288856 vs. ExPASy Swiss-Prot
Match: UBC24_ARATH (Probable ubiquitin-conjugating enzyme E2 24 OS=Arabidopsis thaliana GN=UBC24 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.973e-17 Identity = 42/75 (56.00%), Postives = 54/75 (72.00%), Query Frame = 2 Query: 197 FKQFDAVEDHSDHYYASNVSSLEQP--SNKLVKRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYH 415 F+QFD V D SDH++ S+ L Q + VK++Q+EW LE +LP+TI+VRV E RMDLLRA +VGA GTPYH Sbjct: 633 FRQFDMVNDCSDHHFLSSDKGLAQSQVTKSWVKKVQQEWSNLEANLPNTIYVRVCEERMDLLRAALVGAPGTPYH 707
BLAST of CX288856 vs. ExPASy Swiss-Prot
Match: UBC23_ARATH (Probable ubiquitin carrier protein E2 23 OS=Arabidopsis thaliana GN=UBC23 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.930e-15 Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 2 Query: 197 FKQFDAVEDHSDHYYASNVSSLEQPSNKLVKRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPY 412 F++FD +D DH++ V + + K++ ++WKIL+N+LPD IFVR YE RMDLLRAVIVGA GTPY Sbjct: 824 FRRFDISQDPLDHHFLG-VDGQKTKERQWFKKVDQDWKILQNNLPDGIFVRAYEDRMDLLRAVIVGAFGTPY 894 The following BLAST results are available for this feature:
BLAST of CX288856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288856 ID=CX288856; Name=CX288856; organism=Citrus clementina; type=EST; length=417bpback to top |