CX288866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288866 vs. ExPASy Swiss-Prot
Match: AMPD_ARATH (AMP deaminase OS=Arabidopsis thaliana GN=AMPD PE=1 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 4.410e-48 Identity = 87/114 (76.32%), Postives = 99/114 (86.84%), Query Frame = 1 Query: 34 YHMRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKYFIRGPGGNDIHKTNVPNIRIEFRHETWKEEMQYVYLGRAIIPVEI 375 + +RGLNVSLS+DDPLQIHLTKE LVEEYS+AA VWKLS+CDLCEIARNSVYQSGFSH KSHW+G Y+ RGP GNDIHKTNVP+IR+EFR WKEEMQ VYLG+A+I E+ Sbjct: 724 FFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASVWKLSACDLCEIARNSVYQSGFSHALKSHWIGKDYYKRGPDGNDIHKTNVPHIRVEFRDTIWKEEMQQVYLGKAVISDEV 837
BLAST of CX288866 vs. ExPASy Swiss-Prot
Match: AMPD_ORYSJ (Probable AMP deaminase OS=Oryza sativa subsp. japonica GN=AMPD PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 6.369e-47 Identity = 86/116 (74.14%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 31 TYHMRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKYFIRGPGGNDIHKTNVPNIRIEFRHETWKEEMQYVYLGRAIIPVEID 378 T+ +RGLNVSLS+DDPLQIHLTKE LVEEYS+AA +WKLSSCDLCEIARNSVYQSGFSH KSHW+G Y+ RG GNDIH+TNVP+IRIEFRH WKEEM+ ++L IP EID Sbjct: 699 TFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASLWKLSSCDLCEIARNSVYQSGFSHRLKSHWIGRNYYKRGHDGNDIHQTNVPHIRIEFRHTIWKEEMELIHLRNVDIPEEID 814
BLAST of CX288866 vs. ExPASy Swiss-Prot
Match: AMPD2_RAT (AMP deaminase 2 OS=Rattus norvegicus GN=Ampd2 PE=2 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 3.625e-34 Identity = 66/103 (64.08%), Postives = 80/103 (77.67%), Query Frame = 1 Query: 34 YHMRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKYFIRGPGGNDIHKTNVPNIRIEFRHETWKEEMQYV 342 Y RGL VSLS+DDPLQ H TKE L+EEYS+A +VWKLSSCD+CE+ARNSV SGFSH KSHWLG Y GP GNDI +TNVP+IR+ +R+ET +E+ + Sbjct: 698 YLSRGLMVSLSTDDPLQFHFTKEPLMEEYSIATQVWKLSSCDMCELARNSVLMSGFSHKVKSHWLGPNYTKEGPEGNDIRRTNVPDIRVGYRYETLCQELALI 800
BLAST of CX288866 vs. ExPASy Swiss-Prot
Match: AMPD2_MOUSE (AMP deaminase 2 OS=Mus musculus GN=Ampd2 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 3.625e-34 Identity = 66/103 (64.08%), Postives = 80/103 (77.67%), Query Frame = 1 Query: 34 YHMRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKYFIRGPGGNDIHKTNVPNIRIEFRHETWKEEMQYV 342 Y RGL VSLS+DDPLQ H TKE L+EEYS+A +VWKLSSCD+CE+ARNSV SGFSH KSHWLG Y GP GNDI +TNVP+IR+ +R+ET +E+ + Sbjct: 672 YLSRGLMVSLSTDDPLQFHFTKEPLMEEYSIATQVWKLSSCDMCELARNSVLMSGFSHKVKSHWLGPNYTKEGPEGNDIRRTNVPDIRVGYRYETLCQELALI 774
BLAST of CX288866 vs. ExPASy Swiss-Prot
Match: AMPD2_HUMAN (AMP deaminase 2 OS=Homo sapiens GN=AMPD2 PE=1 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 3.625e-34 Identity = 66/103 (64.08%), Postives = 80/103 (77.67%), Query Frame = 1 Query: 34 YHMRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKYFIRGPGGNDIHKTNVPNIRIEFRHETWKEEMQYV 342 Y RGL VSLS+DDPLQ H TKE L+EEYS+A +VWKLSSCD+CE+ARNSV SGFSH KSHWLG Y GP GNDI +TNVP+IR+ +R+ET +E+ + Sbjct: 752 YLSRGLMVSLSTDDPLQFHFTKEPLMEEYSIATQVWKLSSCDMCELARNSVLMSGFSHKVKSHWLGPNYTKEGPEGNDIRRTNVPDIRVGYRYETLCQELALI 854
BLAST of CX288866 vs. ExPASy Swiss-Prot
Match: AMPD3_RAT (AMP deaminase 3 OS=Rattus norvegicus GN=Ampd3 PE=2 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 5.787e-32 Identity = 63/100 (63.00%), Postives = 79/100 (79.00%), Query Frame = 1 Query: 43 RGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKYFIRGPGGNDIHKTNVPNIRIEFRHETWKEEMQYV 342 +GL+VSLS+DDP+Q H TKEAL+EEY++AA+VWKLS+CDLCEIARNSV QSG SH K +LG Y+ GP GNDI KTNV IR+ FR+ET E+ ++ Sbjct: 652 KGLHVSLSTDDPMQFHYTKEALMEEYAIAAQVWKLSTCDLCEIARNSVLQSGLSHQEKQKFLGQNYYKEGPEGNDIRKTNVAQIRMAFRYETLCNELSFL 751
BLAST of CX288866 vs. ExPASy Swiss-Prot
Match: AMPD3_MOUSE (AMP deaminase 3 OS=Mus musculus GN=Ampd3 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 5.787e-32 Identity = 63/100 (63.00%), Postives = 79/100 (79.00%), Query Frame = 1 Query: 43 RGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKYFIRGPGGNDIHKTNVPNIRIEFRHETWKEEMQYV 342 +GL+VSLS+DDP+Q H TKEAL+EEY++AA+VWKLS+CDLCEIARNSV QSG SH K +LG Y+ GP GNDI KTNV IR+ FR+ET E+ ++ Sbjct: 653 KGLHVSLSTDDPMQFHYTKEALMEEYAIAAQVWKLSTCDLCEIARNSVLQSGLSHQEKQKFLGQNYYKEGPEGNDIRKTNVAQIRMAFRYETLCNELSFL 752
BLAST of CX288866 vs. ExPASy Swiss-Prot
Match: AMPD3_HUMAN (AMP deaminase 3 OS=Homo sapiens GN=AMPD3 PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 5.787e-32 Identity = 63/100 (63.00%), Postives = 79/100 (79.00%), Query Frame = 1 Query: 43 RGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKYFIRGPGGNDIHKTNVPNIRIEFRHETWKEEMQYV 342 +GL+VSLS+DDP+Q H TKEAL+EEY++AA+VWKLS+CDLCEIARNSV QSG SH K +LG Y+ GP GNDI KTNV IR+ FR+ET E+ ++ Sbjct: 654 KGLHVSLSTDDPMQFHYTKEALMEEYAIAAQVWKLSTCDLCEIARNSVLQSGLSHQEKQKFLGQNYYKEGPEGNDIRKTNVAQIRMAFRYETLCNELSFL 753
BLAST of CX288866 vs. ExPASy Swiss-Prot
Match: AMPD_DICDI (AMP deaminase OS=Dictyostelium discoideum GN=amdA PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 9.871e-32 Identity = 65/111 (58.56%), Postives = 80/111 (72.07%), Query Frame = 1 Query: 34 YHMRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKYFIRGPGGNDIHKTNVPNIRIEFRHETWKEEMQYVYLGRAIIP 366 + RGLNVS+S+DDPLQ H TKE L+EEYS+A +VW+LS CD+CEIARNSV QSGF H KSHWLG Y GGNDI KTN+ +IR+ FR+ET EE+ + +P Sbjct: 553 FFARGLNVSISTDDPLQFHYTKEPLMEEYSIATQVWRLSVCDICEIARNSVLQSGFEHNVKSHWLGPDY--ANSGGNDIKKTNISDIRVCFRNETLIEELHLILKSLQTLP 661
BLAST of CX288866 vs. ExPASy Swiss-Prot
Match: AMPD1_RAT (AMP deaminase 1 OS=Rattus norvegicus GN=Ampd1 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.207e-29 Identity = 58/108 (53.70%), Postives = 80/108 (74.07%), Query Frame = 1 Query: 28 ITYHMRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKYFIRGPGGNDIHKTNVPNIRIEFRHETWKEEMQYVYLG 351 + + +GL +SLS+DDP+Q H TKE L+EEY++AA+V+KLS+CD+CE+ARNSV Q G SH K+ +LGN Y GP GNDI +TNV IR+ +R+ETW E+ + G Sbjct: 635 LDFLQKGLMISLSTDDPMQFHFTKEPLMEEYAIAAQVFKLSTCDMCEVARNSVLQCGISHEEKAKFLGNNYLEEGPVGNDIRRTNVAQIRMAYRYETWCYELNLIAEG 742 The following BLAST results are available for this feature:
BLAST of CX288866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288866 ID=CX288866; Name=CX288866; organism=Citrus clementina; type=EST; length=504bpback to top |